lineage | Count |
---|---|
lineage2.2.1 | 68 |
lineage4.3.3 | 6 |
lineage3 | 7 |
lineage4.1.1.3 | 2 |
lineage2.2.2 | 2 |
lineage2.2.1.1;lineage3 | 1 |
spoligotype | Count |
---|---|
None | 86 |
ID | Drug resistance | Lineage | Country iso2 | ERR4813128 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370490 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261637 | MDR-TB | lineage2.2.1 | None | ERR7911011 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014660 | MDR-TB | lineage4.3.3 | None | SRR29289283 | XDR-TB | lineage3 | None | ERR4813671 | MDR-TB | lineage2.2.1 | None | ERR4813076 | MDR-TB | lineage2.2.1 | pe | ERR4813432 | MDR-TB | lineage2.2.1 | pe | SRR18715372 | MDR-TB | lineage2.2.1 | None | SRR14088392 | Pre-XDR-TB | lineage3 | None | SRR15316314 | MDR-TB | lineage2.2.1 | None | SRR29385431 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813692 | MDR-TB | lineage2.2.1 | None | ERR2515881 | MDR-TB | lineage4.1.1.3 | za | ERR4813182 | Pre-XDR-TB | lineage2.2.1 | pe | ERR12117979 | Pre-XDR-TB | lineage2.2.1 | None | ERR2184386 | MDR-TB | lineage2.2.1 | pe | SRR10808506 | MDR-TB | lineage2.2.1 | None | ERR3287621 | MDR-TB | lineage2.2.1 | pe | ERR7910870 | Pre-XDR-TB | lineage2.2.1 | pe | SRR28394066 | MDR-TB | lineage2.2.1 | None | ERR12117918 | MDR-TB | lineage2.2.1 | None | SRR29289285 | Pre-XDR-TB | lineage3 | None | ERR13284392 | MDR-TB | lineage2.2.1 | None | SRR10808633 | MDR-TB | lineage2.2.1 | None | ERR3287757 | MDR-TB | lineage2.2.1 | pe | SRR2024970 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29289207 | XDR-TB | lineage3 | None | SRR3732588 | MDR-TB | lineage2.2.1 | pe | SRR6982240 | RR-TB | lineage2.2.1 | None | ERR4813709 | MDR-TB | lineage2.2.1 | None | ERR12117992 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169223 | MDR-TB | lineage4.3.3 | None | ERR3287422 | MDR-TB | lineage2.2.1 | pe | SRR1169308 | MDR-TB | lineage4.3.3 | None | ERR12117974 | MDR-TB | lineage2.2.1 | None | SRR2024946 | MDR-TB | lineage2.2.1 | cn | SRR17234902 | MDR-TB | lineage2.2.1 | None | ERR3287701 | MDR-TB | lineage2.2.1 | pe | ERR12117976 | MDR-TB | lineage2.2.1 | None | ERR12117968 | MDR-TB | lineage2.2.1 | None | ERR4024988 | MDR-TB | lineage2.2.1 | None | ERR779894 | MDR-TB | lineage2.2.1 | pe | DRR130146 | MDR-TB | lineage2.2.2 | None | ERR4811776 | Pre-XDR-TB | lineage2.2.1 | pe | SRR28393812 | MDR-TB | lineage2.2.1 | None | ERR13264962 | MDR-TB | lineage3 | None | SRR28393485 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681230 | MDR-TB | lineage2.2.1 | None | ERR4810929 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6865512 | MDR-TB | lineage2.2.1 | None | ERR4813108 | Pre-XDR-TB | lineage2.2.1 | pe | SRR3732589 | MDR-TB | lineage2.2.1 | pe | SAMN02403570 | MDR-TB | lineage4.3.3 | za | ERR4811670 | MDR-TB | lineage2.2.1 | pe | SRR6855830 | MDR-TB | lineage4.1.1.3 | None | ERR13258453 | MDR-TB | lineage2.2.2 | None | ERR775378 | MDR-TB | lineage2.2.1 | pe | ERR4813429 | MDR-TB | lineage2.2.1 | pe | ERR775381 | MDR-TB | lineage2.2.1 | pe | ERR4813558 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813654 | Pre-XDR-TB | lineage2.2.1 | None | ERR2184501 | MDR-TB | lineage2.2.1 | None | ERR4813149 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207319 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287783 | MDR-TB | lineage2.2.1 | pe | ERR751461 | MDR-TB | lineage2.2.1 | pe | ERR2307551 | MDR-TB | lineage2.2.1 | None | ERR12117959 | MDR-TB | lineage2.2.1 | None | ERR3287424 | MDR-TB | lineage2.2.1 | pe | ERR751378 | MDR-TB | lineage2.2.1 | pe | SRR1167362 | MDR-TB | lineage4.3.3 | None | SRR25206976 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393491 | MDR-TB | lineage2.2.1 | None | SRR28393798 | MDR-TB | lineage2.2.1 | None | SRR28393427 | MDR-TB | lineage2.2.1 | None | SRR1165700 | MDR-TB | lineage4.3.3 | None | ERR4831496 | Pre-XDR-TB | lineage3 | pk | ERR4831519 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | pk | ERR3287420 | MDR-TB | lineage2.2.1 | pe | ERR4811690 | Pre-XDR-TB | lineage2.2.1 | pe | ERR751594 | MDR-TB | lineage2.2.1 | pe | ERR8975795 | MDR-TB | lineage2.2.1 | None | ERR4831430 | MDR-TB | lineage3 | None | SRR28394053 | MDR-TB | lineage2.2.1 | None |
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