ERR403227
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6359046
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR14782199
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2510302
|
MDR-TB
|
lineage3
|
pk
|
SRR25207036
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865784
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380125
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9119501
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR7516333
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6358720
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR6824518
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR7737818
|
MDR-TB
|
lineage4.8
|
None
|
ERR5864575
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662559
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14164553
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13267486
|
MDR-TB
|
lineage1.1.2
|
None
|
SAMN02414879
|
MDR-TB
|
lineage4.6.1.2
|
se
|
SRR1146380
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358776
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2432999
|
Pre-XDR-TB
|
lineage4.1.2.1
|
br
|
ERR6358825
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6359090
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR7646019
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR12118008
|
MDR-TB
|
lineage4.8
|
None
|
SRR26937010
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6257005
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR2101708
|
RR-TB
|
lineage2.2.1
|
None
|
ERR3256234
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
ERR6359019
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR108510
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR6359043
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4813920
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1166104
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02584676
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR11082996
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2041689
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR2041777
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR6358923
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358718
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2041756
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR4798756
|
Pre-XDR-TB
|
lineage4.8
|
in
|
ERR5865844
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR6358768
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358997
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1162792
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SAMEA2533987
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR11082026
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23310929
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23310881
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910948
|
MDR-TB
|
lineage2.2.1
|
md
|
SRR1166871
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358758
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR551501_ERR551500_ERR551499
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358984
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358791
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR14801729
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR671829
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR6359032
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4799203
|
Pre-XDR-TB
|
lineage4.8
|
in
|
SRR28393466
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28351218
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7516317
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29385275
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29772544
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13276342
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4822297
|
Pre-XDR-TB
|
lineage2.2.1
|
de
|
ERR2124082
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR9992842
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813457
|
RR-TB
|
lineage4.3.2
|
pe
|
ERR4813899
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR6358824
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358938
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR25207360
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207397
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13245231
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR8651643
|
MDR-TB
|
lineage4.4.2
|
cn
|
SRR8651625
|
MDR-TB
|
lineage4.4.2
|
cn
|
SRR13232534
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3132090
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR24710286
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16370625
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR9993097
|
Pre-XDR-TB
|
lineage4.3.2.1
|
None
|
ERR4828073
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5153235
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20969359
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10762451
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2041688
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR5865802
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5065595
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR1723853
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR6358743
|
Pre-XDR-TB
|
lineage4.6.1.2
|
None
|
ERR6865682
|
RR-TB
|
lineage4.3.2
|
None
|
ERR552223
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358808
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR28351321
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797687
|
MDR-TB
|
lineage3.1
|
in
|
ERR13290338
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4178150
|
RR-TB
|
lineage4.3.2
|
None
|
SRR28351616
|
MDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
SRR1144753
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR229990
|
RR-TB
|
lineage4.8
|
ru
|
ERR6359031
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358787
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2124080
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4798933
|
MDR-TB
|
lineage4.3.3
|
in
|
SRR15315927
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR671837
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR5864582
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4813827
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR6358797
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358782
|
Pre-XDR-TB
|
lineage4.6.1.2
|
None
|
ERR5865801
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516521
|
MDR-TB
|
lineage4
|
nl
|
ERR6358775
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR17657964
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR11081349
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284232
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358916
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4813879
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR25207054
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3132142
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358728
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4798296
|
Pre-XDR-TB
|
lineage4.8
|
in
|
ERR6358727
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR18002935
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15315980
|
RR-TB
|
lineage2.2.1
|
None
|
SRR28393335
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR10762271
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6359093
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358964
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR5865783
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24255918
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232476
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824519
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR5865835
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358719
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR29385365
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4872095
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR17657959
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR28351396
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR8651650
|
Pre-XDR-TB
|
lineage4.1.2.1
|
cn
|
ERR551500
|
RR-TB
|
lineage2.2.1
|
None
|
ERR2432989
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR6358944
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4797514
|
MDR-TB
|
lineage3.1
|
in
|
ERR4800365
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4810961
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4829549
|
MDR-TB
|
lineage2.2.1
|
it
|
SRR26937006
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6832504
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290341
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358783
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358803
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR10762496
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11773792
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6358992
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR11662203
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865081
|
MDR-TB
|
lineage4.8
|
None
|
ERR10762342
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
SRR1723854
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR2041798
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR5864576
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358985
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR133984
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR8651600
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR2041709
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR5865845
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13290339
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR13292541
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23311076
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28044939
|
MDR-TB
|
lineage1.2.2.1
|
None
|
SRR24828599
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR3256254
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
ERR7911404
|
Pre-XDR-TB
|
lineage2.2.1
|
us
|
ERR2041797
|
MDR-TB
|
lineage4.2.2.1
|
None
|
ERR3256236
|
MDR-TB
|
lineage4.3.4.1;lineage4.3.4.2
|
ph
|
ERR13284831
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206908
|
MDR-TB
|
lineage4.5
|
None
|
ERR6359010
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4276910
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665788
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284040
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11567783
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR18715372
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2124081
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358813
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR5153253
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797535
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR108469
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5864580
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21001885
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21001884
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6359013
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR7911175
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
ERR11798562
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813853
|
MDR-TB
|
lineage4.1.2.1
|
br
|
SRR29273831
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6359109
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2041723
|
Pre-XDR-TB
|
lineage4.2.2.1
|
rs
|
ERR3132130
|
MDR-TB
|
lineage4.6.1.1;lineage4.6.1.2
|
None
|
ERR6358932
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358742
|
MDR-TB
|
lineage4.2.2.2;lineage4.6.1.2
|
None
|
SRR12931706
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2041795
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR4832034
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR7911388
|
Pre-XDR-TB
|
lineage2.2.1
|
us
|
ERR067605
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR6358812
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358777
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6359058
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4800094
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR25207044
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10040275
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3256259
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
ERR5864581
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665787
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6358814
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR13290340
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR28393447
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2510520
|
Pre-XDR-TB
|
lineage4.2.2
|
pk
|
SRR29127089
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798563
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6358750
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR11567791
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR11044220
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3132156
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR13292553
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3743406
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29093897
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR7910961
|
MDR-TB
|
lineage2.2.1
|
md
|
SRR26937054
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14781959
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11567785
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR11567784
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR24256130
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|