Rv0676c - c.1353A>G
Drug resistance types
155 Sensitive
6 RR-TB
30 HR-TB
19 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 20 |
| lineage1.1.1.1 | 3 |
| lineage4.3.3;lineage2.2.1 | 1 |
| lineage4.6.5 | 3 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1 | 24 |
| lineage4.8 | 106 |
| lineage4.3.2 | 4 |
| lineage2.2 | 1 |
| lineage4.9 | 7 |
| lineage4.3.3 | 9 |
| lineage4.3.4.2 | 3 |
| lineage4 | 10 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.2 | 6 |
| lineage4.1.2.1 | 15 |
| lineage4.2.1.1 | 5 |
| 5 | |
| La1.7.X-unk4 | 1 |
| lineage1.1.1 | 1 |
| La1.7.1 | 2 |
| La1.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.2.1 | 4 |
| lineage4.6 | 1 |
| lineage4.2.2.2 | 4 |
| lineage4.3.4.2.1 | 2 |
| lineage4.7 | 4 |
| lineage3.1.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.4 | 1 |
| La1.8.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 265 |
Geographic prevalence
Country level data for this variant is available for 67 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7517691 | Pre-XDR-TB | lineage3 | None | ERR4831875 | HR-TB | lineage1.1.1.1 | vn | SRR998855 | Sensitive | lineage4.3.3;lineage2.2.1 | None | ERR11043614 | MDR-TB | lineage4.6.5 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR998861 | MDR-TB | lineage2.2.1 | None | SRR7765063 | Pre-XDR-TB | lineage4.8 | None | SRR998858 | Pre-XDR-TB | lineage2.2.1 | None | ERR10969264 | Sensitive | lineage4.3.2 | None | ERR1194813 | Other | lineage2.2.1 | None | ERR1194817 | HR-TB | lineage2.2 | None | ERR1194815 | Other | lineage2.2.1 | None | ERR1194816 | Other | lineage2.2.1 | None | ERR5979793 | Sensitive | lineage4.9 | None | ERR4132452 | MDR-TB | lineage4.3.3 | None | ERR4195506 | HR-TB | lineage4.8 | None | ERR3828633 | Sensitive | lineage4.3.4.2 | None | ERR4132445 | Sensitive | lineage4 | None | ERR5979791 | Sensitive | lineage4.9 | None | ERR5979801 | Sensitive | lineage4.9 | None | ERR7801195 | HR-TB | lineage4.3.3 | None | ERR5979828 | Sensitive | lineage4.9 | None | ERR7339146 | Sensitive | lineage1.1.1.1 | None | ERR9285855 | Sensitive | lineage4.3.4.1 | None | SRR11972220 | HR-TB | lineage2.2.1.1 | None | ERR983235 | MDR-TB | lineage1.1.2 | None | ERR9891976 | Sensitive | lineage4.1.2.1 | None | SRR1002683 | Sensitive | lineage4.2.1.1 | None | SRR1002697 | HR-TB | lineage4.2.1.1 | None | ERR9892286 | Sensitive | lineage4.1.2.1 | None | SRR1002698 | Sensitive | lineage4.8 | None | SRR1002701 | Sensitive | lineage4.3.3 | None | SRR11972414 | MDR-TB | lineage1.1.2 | None | SRR11972217 | HR-TB | lineage4.8 | None | SRR11972234 | Sensitive | None | SRR11972413 | MDR-TB | lineage1.1.2 | None | SRR11972453 | Sensitive | lineage1.1.2 | None | SRR13986565 | Other | La1.7.X-unk4 | None | SRR12199469 | Sensitive | lineage1.1.1 | None | SRR12199389 | Other | None | SRR12199455 | Other | None | SRR13986566 | Other | La1.7.1 | None | SRR13986559 | Other | La1.2 | None | SRR16088004 | Other | lineage4.1.2 | None | SRR14801749 | Sensitive | None | SRR13986556 | Other | La1.7.1 | None | SRR18213686 | HR-TB | lineage3 | None | SRR16088231 | Sensitive | lineage4.2.1.1 | None | ERR11082694 | MDR-TB | lineage4.6.5 | None | SRR21676316 | Sensitive | lineage4.3.2 | None | SRR21677874 | Sensitive | None | SRR21677891 | Other | lineage4.1.2 | None | SRR18715065 | MDR-TB | lineage4.1.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR11081688 | MDR-TB | lineage4.6.5 | None | SRR23862092 | Sensitive | lineage4.2.1 | None | SRR23862081 | Sensitive | lineage4.3.3 | None | SRR3675466 | Sensitive | lineage4.6 | None | ERR4815113 | HR-TB | lineage4.1.2.1 | gb | ERR4814291 | Sensitive | lineage4.3.2 | gb | SRR3085281 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814444 | Sensitive | lineage3 | gb | ERR4815071 | Sensitive | lineage3 | None | ERR4814901 | Other | lineage2.2.1 | gb | ERR4814501 | Other | lineage4.2.2.2 | None | ERR4814726 | Sensitive | lineage1.1.2 | gb | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR2228921 | Sensitive | lineage4.8 | dk | ERR2229531 | Sensitive | lineage4.8 | None | ERR2228930 | Sensitive | lineage4.8 | dk | ERR2228922 | Sensitive | lineage4.8 | dk | ERR2228935 | Sensitive | lineage4.8 | dk | ERR2228948 | Sensitive | lineage4.8 | None | ERR4815842 | HR-TB | lineage4.7 | gb | ERR2229540 | Other | lineage4.8 | None | ERR2228981 | HR-TB | lineage4.8 | None | ERR2229741 | Sensitive | lineage4.8 | None | ERR2229742 | Other | lineage4 | None | ERR1949958 | Sensitive | lineage4.8 | dk | ERR2228999 | Sensitive | lineage4.8 | None | ERR2228998 | Sensitive | lineage4.8 | None | ERR2229002 | Sensitive | lineage4 | None | ERR2228997 | Sensitive | lineage4.8 | dk | ERR2229004 | Sensitive | lineage4.8 | dk | ERR2229013 | Sensitive | lineage4.8 | dk | ERR2229006 | Sensitive | lineage4.8 | dk | ERR2229005 | Sensitive | lineage4.8 | None | ERR2229014 | Sensitive | lineage4.8 | dk | ERR1950027 | Sensitive | lineage4.8 | None | ERR2229015 | Sensitive | lineage4.8 | dk | ERR2229036 | Sensitive | lineage4.8 | None | ERR1950029 | Other | lineage4.8 | None | ERR2229034 | Sensitive | lineage4.8 | None | ERR2229038 | Sensitive | lineage4.8 | None | ERR2229745 | HR-TB | lineage4.8 | None | ERR2229096 | Sensitive | lineage4 | None | ERR1950051 | Sensitive | lineage4.8 | dk | ERR2229042 | HR-TB | lineage4.8 | None | ERR4816142 | Sensitive | lineage4.9 | None | ERR2229102 | Sensitive | lineage4.8 | dk | ERR4816182 | Other | lineage3.1.2.1 | gb | ERR2229109 | Sensitive | lineage4.8 | None | ERR4816204 | Sensitive | lineage4.2.2 | None | ERR2229115 | Other | lineage4.8 | None | ERR2229130 | Sensitive | lineage4.8 | None | ERR2229101 | Sensitive | lineage4.8 | dk | ERR2229142 | HR-TB | lineage4.8 | None | ERR4816361 | Sensitive | lineage4.1.2.1 | None | ERR2229588 | Sensitive | lineage4.8 | None | ERR2229168 | Other | lineage4 | None | ERR2229586 | Other | lineage4.8 | None | ERR2229163 | Sensitive | lineage4 | None | ERR2229235 | RR-TB | lineage4.8 | None | ERR2229614 | Sensitive | lineage4.8 | None | ERR2229595 | RR-TB | lineage4.8 | dk | ERR2229564 | Sensitive | lineage4.8 | dk | ERR2229767 | Sensitive | lineage4.8 | dk | ERR2229630 | Sensitive | lineage4.8 | None | ERR2229633 | Sensitive | lineage4.8 | None | ERR2229634 | Sensitive | lineage4.8 | None | ERR2229294 | Other | lineage4.8 | None | ERR2229289 | Sensitive | lineage4.8 | None | ERR2229298 | Sensitive | lineage4.8 | None | ERR2229369 | Other | lineage4.8 | None | ERR2229323 | Sensitive | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | ERR2229311 | Sensitive | lineage4.8 | None | ERR2229324 | Other | lineage4.8 | None | ERR2229354 | Sensitive | lineage4.8 | dk | ERR2229367 | Sensitive | lineage4.8 | dk | ERR2229382 | Sensitive | lineage4.8 | None | ERR2229381 | Sensitive | lineage4.8 | None | ERR2229383 | Sensitive | lineage4.8 | None | ERR2229384 | Sensitive | lineage4.8 | None | ERR2229380 | Sensitive | lineage4.8 | None | ERR2229426 | HR-TB | lineage4.8 | dk | ERR2229399 | Sensitive | lineage4.8 | None | ERR2229395 | Sensitive | lineage4.8 | None | ERR2229406 | Other | lineage4.8 | None | ERR2229403 | Sensitive | lineage4.8 | None | ERR2229410 | Sensitive | lineage4.8 | None | ERR2229802 | Sensitive | lineage4.8 | None | ERR2229432 | Sensitive | lineage4.8 | dk | ERR2229441 | Sensitive | lineage4.8 | None | ERR2229711 | Sensitive | lineage4.8 | None | ERR2229708 | HR-TB | lineage4.8 | None | ERR2229454 | Sensitive | lineage4.8 | dk | ERR2229462 | Other | lineage4.8 | None | ERR2228885 | Sensitive | lineage4.8 | dk | ERR2229476 | Sensitive | lineage4.8 | None | ERR2229499 | Sensitive | lineage4 | None | ERR2228811 | Sensitive | lineage4.8 | None | ERR2228823 | Sensitive | lineage4 | None | ERR2228870 | Sensitive | lineage4.8 | dk | ERR2228868 | Sensitive | lineage4.8 | None | ERR4817441 | Sensitive | lineage4.2.2.2 | None | ERR2228886 | Sensitive | lineage4.8 | dk | ERR2229521 | Sensitive | lineage4.8 | None | ERR2228889 | Sensitive | lineage4.8 | dk | ERR2228897 | Sensitive | lineage4 | None | ERR2228912 | Sensitive | lineage4.8 | dk | ERR2228903 | RR-TB | lineage4 | None | ERR2228915 | Sensitive | lineage4.8 | None | ERR2228916 | Sensitive | lineage4.8 | dk | ERR2228911 | Sensitive | lineage4.8 | dk | ERR2228920 | Sensitive | lineage4.8 | dk | ERR2228919 | Sensitive | lineage4.8 | dk | ERR4817770 | Sensitive | lineage3 | None | ERR2228918 | Sensitive | lineage4.8 | dk | ERR2245345 | HR-TB | lineage3.1.1 | no | ERR2512972 | Other | lineage1.1.2 | None | ERR2512970 | Other | lineage4.8 | gb | ERR4817902 | Sensitive | lineage3.1.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR2513054 | Other | lineage4.2.2.2 | None | ERR4818736 | Sensitive | lineage1.2.2.2 | None | ERR4817987 | Other | lineage4.7 | None | ERR2513100 | Sensitive | lineage2.2.1 | gb | ERR4818093 | Sensitive | lineage3.1.1 | gb | ERR2513436 | MDR-TB | lineage2.2.1 | None | ERR2512460 | Other | lineage1.2.2.2 | gb | ERR2513217 | Sensitive | lineage4.7 | None | ERR4818170 | Other | lineage4.1.2.1 | None | ERR4818503 | Other | lineage3 | None | ERR4818922 | Sensitive | lineage3 | None | ERR2512615 | Sensitive | lineage3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818550 | Sensitive | lineage4.1.2.1 | None | ERR4818944 | Sensitive | lineage3 | None | ERR2512912 | Sensitive | lineage4.6.2.2 | None | ERR2513317 | Sensitive | lineage4.8 | gb | ERR4817601 | Sensitive | lineage2.2.1 | None | ERR2513655 | Sensitive | lineage4.3.4.2.1 | gb | ERR2513628 | Other | lineage4.1.2.1 | None | ERR2513895 | Sensitive | lineage4.8 | None | ERR2513861 | Sensitive | lineage4.8 | gb | ERR2514075 | MDR-TB | lineage3 | gb | ERR2514106 | Pre-XDR-TB | lineage3 | gb | ERR2514083 | Sensitive | lineage3 | gb | ERR4819424 | Other | lineage4.8 | gb | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR2514197 | RR-TB | lineage1.1.1.1 | None | ERR4819500 | Sensitive | lineage4.1.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819546 | HR-TB | lineage3 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819661 | Other | lineage3 | gb | ERR4820783 | Sensitive | lineage3.1.2 | gb | ERR2514652 | Other | lineage4.7 | gb | ERR2514408 | Sensitive | lineage4.8 | gb | ERR2514525 | Sensitive | lineage4.1.1 | gb | ERR4821024 | Sensitive | lineage3 | None | ERR2514708 | Sensitive | lineage4.1.2.1 | None | ERR4819867 | Other | lineage1.1.3.2 | None | ERR2514962 | Other | lineage4.4 | None | ERR4820155 | MDR-TB | lineage4.3.2 | None | ERR2514873 | HR-TB | lineage3 | None | ERR4819947 | Sensitive | lineage4.1.1 | None | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR2516152 | MDR-TB | lineage4.8 | es | SRR5431792 | Other | La1.8.1 | None | SRR5431711 | Other | La1.8.1 | None | SRR5535718 | HR-TB | lineage4.3.3 | None | ERR4822301 | MDR-TB | lineage4.8 | None | SRR5535779 | Sensitive | lineage4.3.2.1 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4822127 | Sensitive | lineage4.8 | gb | ERR4821761 | Other | lineage3 | gb | ERR4821729 | Sensitive | lineage4.1.2.1 | None | ERR4821702 | Sensitive | lineage4.3.4.2 | None | ERR4830862 | MDR-TB | lineage4.4.1.1 | sz | SRR6045932 | MDR-TB | lineage4.2.2.2 | None | SRR6045200 | Sensitive | lineage4.5 | gb | SRR6044910 | Sensitive | lineage3 | None | SRR6045086 | Other | lineage3 | None | SRR6256984 | MDR-TB | lineage2.2.1 | ru | SRR6485085 | Sensitive | lineage2.2.1 | None | SRR6484891 | HR-TB | lineage4.8 | None | SRR6256977 | Pre-XDR-TB | lineage2.2.1 | ru | SRR6257064 | Sensitive | lineage4.3.3 | None | SRR6257039 | Sensitive | lineage4.2.1.1 | None | SRR6257062 | Sensitive | lineage4.8 | None | SRR6257061 | MDR-TB | lineage2.2.1 | None | ERR4831825 | HR-TB | lineage2.2.1 | None | SRR6257063 | HR-TB | lineage4.2.1.1 | None | ERR3148044 | MDR-TB | lineage4.8 | None | SRR6785157 | Sensitive | lineage4.2.1 | None | SRR6785184 | Sensitive | lineage4.3.3 | None | SRR6785175 | Sensitive | lineage4.8 | None | SRR6785327 | Sensitive | lineage2.2.1 | None | SRR6785187 | Sensitive | lineage4.2.1 | None | SRR6785189 | Other | lineage4.1.2.1 | None | SRR6785302 | Sensitive | lineage4.8 | None | SRR6785296 | HR-TB | lineage2.2.1 | None | SRR6785434 | Sensitive | lineage2.2.1 | None | SRR6785356 | Sensitive | lineage4.3.3 | None | SRR6785363 | HR-TB | lineage2.2.1 | None | SRR6785453 | HR-TB | lineage2.2.1 | None | SRR6785437 | HR-TB | lineage2.2.1 | None | SRR6785446 | Sensitive | lineage4.3.3 | None | SRR6785525 | HR-TB | lineage4.8 | None | SRR6785475 | Other | lineage2.2.1 | None |
|---|
