Rv0678 - p.Met146Thr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
79 MDR-TB
0 Pre-XDR-TB
27 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 102 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.3 | 2 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11488941 | XDR-TB | lineage4.4.1.1 | None | ERR11488380 | XDR-TB | lineage4.4.1.1 | None | ERR11049772 | Other | lineage4.1.2.1 | None | ERR11488401 | MDR-TB | lineage4.4.1.1 | None | ERR553243 | MDR-TB | lineage4.4.1.1 | None | ERR2200094 | MDR-TB | lineage4.4.1.1 | None | ERR4020184 | MDR-TB | lineage4.4.1.1 | None | ERR9992922 | XDR-TB | lineage4.4.1.1 | None | ERR4830867 | MDR-TB | lineage4.4.1.1 | sz | ERR13093932 | MDR-TB | lineage4.4.1.1 | None | SRR9588023 | MDR-TB | lineage4.4.1.1 | None | ERR11488896 | MDR-TB | lineage4.4.1.1 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR13260900 | XDR-TB | lineage4.4.1.1 | None | ERR4020188 | MDR-TB | lineage4.4.1.1 | None | ERR4020183 | MDR-TB | lineage4.4.1.1 | None | ERR11488616 | MDR-TB | lineage4.4.1.1 | None | SRR9588026 | MDR-TB | lineage4.4.1.1 | None | ERR4800495 | Other | lineage1.1.3.3 | in | ERR11488791 | MDR-TB | lineage4.4.1.1 | None | SRR28045691 | XDR-TB | lineage4.1.1.3 | None | ERR4830863 | MDR-TB | lineage4.4.1.1 | sz | SAMEA2534689 | MDR-TB | lineage4.4.1.1 | None | SAMEA2535241 | MDR-TB | lineage4.4.1.1 | None | ERR4830861 | MDR-TB | lineage4.4.1.1 | sz | SRR9588027 | MDR-TB | lineage4.4.1.1 | None | ERR4830862 | MDR-TB | lineage4.4.1.1 | sz | ERR4830859 | MDR-TB | lineage4.4.1.1 | sz | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | ERR4830870 | MDR-TB | lineage4.4.1.1 | sz | ERR4830874 | MDR-TB | lineage4.4.1.1 | sz | ERR4830879 | MDR-TB | lineage4.4.1.1 | sz | SRR9588028 | MDR-TB | lineage4.4.1.1 | None | SAMEA2534447 | MDR-TB | lineage4.4.1.1 | None | ERR4020185 | MDR-TB | lineage4.4.1.1 | None | ERR11488861 | XDR-TB | lineage4.4.1.1 | None | SRR9588011 | MDR-TB | lineage4.4.1.1 | None | ERR11488470 | MDR-TB | lineage4.4.1.1 | None | SAMEA2534888 | MDR-TB | lineage4.4.1.1 | None | ERR552878 | HR-TB | lineage4.4.1.1 | None | ERR9992909 | XDR-TB | lineage4.4.1.1 | None | ERR11488353 | XDR-TB | lineage4.4.1.1 | None | ERR552876 | MDR-TB | lineage4.4.1.1 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR9993053 | XDR-TB | lineage4.4.1.1 | None | ERR552877 | HR-TB | lineage4.4.1.1 | None | ERR4830848 | MDR-TB | lineage4.4.1.1 | sz | SRR9588006 | MDR-TB | lineage4.4.1.1 | None | ERR11488638 | MDR-TB | lineage4.4.1.1 | None | ERR4020187 | MDR-TB | lineage4.4.1.1 | None | SAMEA2534974 | MDR-TB | lineage4.4.1.1 | None | ERR552764 | MDR-TB | lineage4.4.1.1 | None | ERR11488951 | XDR-TB | lineage4.4.1.1 | None | ERR9993022 | XDR-TB | lineage4.4.1.1 | None | ERR11488969 | XDR-TB | lineage4.4.1.1 | None | SRR9588024 | MDR-TB | lineage4.4.1.1 | None | ERR11488623 | XDR-TB | lineage4.4.1.1 | None | ERR9992916 | XDR-TB | lineage4.4.1.1 | None | ERR4020186 | MDR-TB | lineage4.4.1.1 | None | ERR4830857 | MDR-TB | lineage4.4.1.1 | sz | ERR4830860 | MDR-TB | lineage4.4.1.1 | sz | ERR4830864 | MDR-TB | lineage4.4.1.1 | sz | ERR4830876 | MDR-TB | lineage4.4.1.1 | sz | ERR4830873 | MDR-TB | lineage4.4.1.1 | sz | ERR11488352 | XDR-TB | lineage4.4.1.1 | None | ERR11488657 | XDR-TB | lineage4.4.1.1 | None | ERR4830854 | MDR-TB | lineage4.4.1.1 | None | ERR11488765 | XDR-TB | lineage4.4.1.1 | None | ERR552149 | MDR-TB | lineage4.4.1.1 | None | SRR22251881 | Other | lineage2.2.1 | None | SRR9588010 | MDR-TB | lineage4.4.1.1 | None | SRR22250141 | Other | lineage1.1.3.3 | None | ERR9992968 | XDR-TB | lineage4.4.1.1 | None | ERR13260901 | XDR-TB | lineage4.4.1.1 | None | ERR9992976 | MDR-TB | lineage4.3.3 | None | ERR9993018 | XDR-TB | lineage4.3.3 | None | ERR9992617 | MDR-TB | lineage4.4.1.1 | None | ERR9992923 | XDR-TB | lineage4.4.1.1 | None | ERR2200022 | MDR-TB | lineage4.4.1.1 | None | ERR9027252 | MDR-TB | lineage4.4.1.1 | None | ERR11488900 | XDR-TB | lineage4.4.1.1 | None | SRR29056138 | MDR-TB | lineage4.4.1.1 | None | ERR11488890 | XDR-TB | lineage4.4.1.1 | None | SRR5894884 | XDR-TB | lineage2.2.2 | None | ERR11488884 | XDR-TB | lineage4.4.1.1 | None | SAMEA2535221 | MDR-TB | lineage4.4.1.1 | None | SRR29341511 | MDR-TB | lineage4.4.1.1 | None | SRR9588025 | MDR-TB | lineage4.4.1.1 | None | ERR553222 | MDR-TB | lineage4.4.1.1 | None | ERR4797962 | XDR-TB | lineage4.1.1.3 | in | ERR12796605 | MDR-TB | lineage4.4.1.1 | None | ERR502885 | XDR-TB | lineage2.2.2 | None | ERR552491 | MDR-TB | lineage4.4.1.1 | sz | ERR552754 | MDR-TB | lineage4.4.1.1 | sz | ERR552765 | MDR-TB | lineage4.4.1.1 | sz | ERR552612 | MDR-TB | lineage4.4.1.1 | sz | ERR552405 | MDR-TB | lineage4.4.1.1 | sz | ERR550861 | MDR-TB | lineage4.4.1.1 | sz | ERR551536 | MDR-TB | lineage4.4.1.1 | sz | ERR551280 | MDR-TB | lineage4.4.1.1 | sz | ERR552124 | MDR-TB | lineage4.4.1.1 | sz | ERR552193 | MDR-TB | lineage4.4.1.1 | sz | ERR553221 | MDR-TB | lineage4.4.1.1 | sz | ERR553230 | MDR-TB | lineage4.4.1.1 | sz | ERR550741 | MDR-TB | lineage4.4.1.1 | sz | ERR552150 | MDR-TB | lineage4.4.1.1 | sz | ERR553242 | MDR-TB | lineage4.4.1.1 | sz | ERR551014 | MDR-TB | lineage4.4.1.1 | sz | ERR552540 | MDR-TB | lineage4.4.1.1 | sz | ERR552496 | MDR-TB | lineage4.4.1.1 | sz | ERR552070 | MDR-TB | lineage4.4.1.1 | sz | ERR552484 | MDR-TB | lineage4.4.1.1 | sz |
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