Rv0682 - p.Lys88Thr

Drug resistance types
0 Sensitive 1 RR-TB 9 HR-TB 257 MDR-TB 31 Pre-XDR-TB 0 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.2.2.2 90
lineage4.3.4.2 31
lineage3 8
lineage4.3.3 109
lineage4.4.1.1 8
lineage2.2.1 3
lineage4.3.4.1;lineage4.3.3 2
lineage4.2.1.1 1
lineage4.6.1.2 5
lineage1.2.2.2 8
lineage3;lineage1.2.2.2 3
2
lineage4.1.1 3
lineage4.2.2 1
lineage4.1.2.1 5
lineage4 3
lineage4.6.1.1 1
lineage1.1.1.1 7
lineage3.1.2.1 2
lineage2.1 1
lineage1.1.1 2
lineage4.2 1
lineage2.2.2 1
lineage1 1
lineage2.2.1.1 3
lineage4.4.2 1
lineage1.2.1.2.1 2
lineage4.5 2
lineage1.1.2 2
lineage2.2 1
lineage4.6.2.2 1
spoligotype Counts
spoligotype Count
None 310
Geographic prevalence
Country level data for this variant is available for 124 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4830796 Pre-XDR-TB lineage4.2.2.2 None
ERR4830834 MDR-TB lineage4.2.2.2 None
ERR4830809 Pre-XDR-TB lineage4.2.2.2 None
ERR2677447 MDR-TB lineage4.2.2.2 de
ERR4830839 MDR-TB lineage4.2.2.2 et
ERR4828871 MDR-TB lineage4.2.2.2 None
ERR4828843 MDR-TB lineage4.2.2.2 None
ERR4828989 MDR-TB lineage4.2.2.2 it
ERR4829756 MDR-TB lineage4.3.4.2 it
ERR4829824 Pre-XDR-TB lineage3 it
ERR4828868 MDR-TB lineage4.2.2.2 None
ERR4828996 MDR-TB lineage4.2.2.2 None
SRR6046888 MDR-TB lineage3 gb
ERR4830782 MDR-TB lineage4.2.2.2 et
ERR4829004 MDR-TB lineage4.2.2.2 it
SRR6153144 HR-TB lineage3 ca
SRR7517834 MDR-TB lineage4.3.3 pe
ERR4831240 MDR-TB lineage4.2.2.2 de
SAMN02414881 MDR-TB lineage4.2.2.2 se
SAMN02414935 MDR-TB lineage4.4.1.1 se
ERR4831239 MDR-TB lineage4.2.2.2 None
SAMN02414962 MDR-TB lineage4.2.2.2 se
SRR8651597 Pre-XDR-TB lineage2.2.1 cn
SRR7781499 Pre-XDR-TB lineage3 None
ERR1023344 MDR-TB lineage4.2.2.2 None
SRR7781506 MDR-TB lineage4.2.2.2 None
DRR184619 MDR-TB lineage2.2.1 vn
ERR1034703 MDR-TB lineage4.3.3 pe
ERR1023410 MDR-TB lineage4.2.2.2 None
ERR1034750 MDR-TB lineage4.3.3 pe
ERR1034748 MDR-TB lineage4.3.3 pe
ERR1034798 MDR-TB lineage4.3.3 pe
ERR1034757 MDR-TB lineage4.3.4.1;lineage4.3.3 pe
ERR11044007 MDR-TB lineage4.2.2.2 None
ERR11043787 MDR-TB lineage4.2.2.2 None
ERR11042995 MDR-TB lineage4.2.2.2 None
ERR11043789 MDR-TB lineage4.2.1.1 None
ERR11043936 MDR-TB lineage4.2.2.2 None
ERR1199111 MDR-TB lineage4.6.1.2 cd
ERR11044333 MDR-TB lineage4.2.2.2 None
ERR11044613 MDR-TB lineage4.2.2.2 None
ERR117667 MDR-TB lineage1.2.2.2 None
ERR11044024 MDR-TB lineage4.2.2.2 None
ERR3287426 MDR-TB lineage4.3.3 pe
ERR3287363 Pre-XDR-TB lineage4.3.3 pe
ERR3287374 MDR-TB lineage4.3.3 pe
ERR3287570 MDR-TB lineage4.3.4.2 None
ERR3287573 MDR-TB lineage4.3.4.2 None
ERR3287572 MDR-TB lineage4.3.4.2 None
ERR3287610 Pre-XDR-TB lineage4.3.3 None
ERR3287818 MDR-TB lineage4.3.3 pe
ERR3287691 MDR-TB lineage4.3.3 pe
ERR3287725 MDR-TB lineage4.3.3 pe
ERR3287766 MDR-TB lineage4.3.3 pe
ERR3287803 MDR-TB lineage4.3.3 None
ERR3287685 MDR-TB lineage4.3.3 pe
ERR3287732 MDR-TB lineage4.3.3 pe
ERR3287747 MDR-TB lineage4.3.3 pe
ERR3287749 MDR-TB lineage4.3.3 pe
ERR3287786 MDR-TB lineage4.3.3 pe
ERR3287854 MDR-TB lineage4.3.3 pe
ERR3287813 MDR-TB lineage4.3.3 pe
ERR386890 HR-TB lineage3;lineage1.2.2.2 None
ERR3287872 MDR-TB lineage4.3.3 pe
ERR386892 MDR-TB lineage1.2.2.2 None
ERR4011965 MDR-TB lineage4.2.2.2 None
ERR4011954 MDR-TB lineage4.2.2.2 None
ERR4011973 MDR-TB lineage4.2.2.2 None
ERR4011961 MDR-TB lineage4.2.2.2 None
ERR4011963 MDR-TB lineage4.2.2.2 None
ERR4011964 MDR-TB lineage4.2.2.2 None
ERR4011951 MDR-TB lineage4.2.2.2 None
ERR4011969 MDR-TB lineage4.2.2.2 None
ERR4011968 MDR-TB lineage4.2.2.2 None
ERR4024938 Pre-XDR-TB lineage4.3.3 None
ERR4025035 MDR-TB lineage4.3.3 None
ERR4553783 MDR-TB None
ERR4178154 HR-TB lineage4.3.3 None
ERR403355 Other lineage4.1.1 None
ERR4276911 MDR-TB lineage4.2.2.2 None
ERR4796795 Pre-XDR-TB lineage4.2.2 in
ERR11049567 MDR-TB lineage4.2.2.2 None
ERR4799189 Other lineage4.1.2.1 in
ERR4800575 Pre-XDR-TB lineage3 in
ERR4812064 MDR-TB lineage4.3.4.2 None
ERR4811913 MDR-TB lineage4.3.3 pe
ERR4811979 MDR-TB lineage4.3.3 pe
ERR4812632 MDR-TB lineage4.3.3 None
ERR4812567 MDR-TB lineage4 pe
ERR4812356 MDR-TB lineage4.3.4.2 pe
ERR6358868 MDR-TB lineage4.6.1.1 None
ERR6358757 MDR-TB lineage4.6.1.2 None
ERR6358920 MDR-TB lineage4.6.1.2 None
ERR6397171 MDR-TB lineage4.2.2.2 None
ERR6359063 MDR-TB lineage4.6.1.2 None
ERR6397151 MDR-TB lineage4.2.2.2 None
ERR6397154 MDR-TB lineage4.2.2.2 None
ERR6865324 Pre-XDR-TB lineage4.3.3 None
ERR6397199 MDR-TB lineage4.2.2.2 None
ERR6866134 MDR-TB lineage4.3.4.2 None
ERR6865602 MDR-TB lineage4.3.3 None
ERR6865695 HR-TB lineage4.3.3 None
ERR6866131 MDR-TB lineage4.3.3 None
ERR6866333 MDR-TB lineage4.3.4.2 None
ERR6866164 MDR-TB lineage4.3.3 None
ERR6879033 MDR-TB lineage4.3.3 None
ERR6866863 MDR-TB lineage4.3.4.2 None
ERR6879035 MDR-TB lineage4.3.4.1;lineage4.3.3 None
ERR6879047 MDR-TB lineage4.3.3 None
ERR6879034 MDR-TB lineage4.3.3 None
ERR751365 MDR-TB lineage4.3.3 pe
ERR7339138 Other lineage1.1.1.1 None
ERR751351 MDR-TB lineage4.3.3 pe
ERR751437 MDR-TB lineage4.3.3 pe
ERR751543 MDR-TB lineage4.3.3 pe
ERR751436 MDR-TB lineage4.3.3 pe
ERR751482 MDR-TB lineage4.3.4.2 pe
ERR751549 MDR-TB lineage4.3.4.2 pe
ERR751416 MDR-TB lineage4.3.3 pe
ERR751509 MDR-TB lineage4.3.3 pe
ERR751571 MDR-TB lineage4.3.3 pe
ERR751548 Pre-XDR-TB lineage4.3.3 pe
ERR751565 MDR-TB lineage4.3.4.2 pe
ERR7737680 MDR-TB lineage4.2.2.2 None
ERR751582 MDR-TB lineage4.3.4.2 pe
ERR751595 MDR-TB lineage4.3.3 pe
ERR7737644 MDR-TB lineage4.2.2.2 None
ERR7737682 MDR-TB lineage4.2.2.2 None
ERR751591 Pre-XDR-TB lineage4.3.3 pe
ERR751616 MDR-TB lineage4.3.3 pe
ERR751609 MDR-TB lineage4.3.3 pe
ERR7737633 MDR-TB lineage1.1.1.1 None
ERR7737707 MDR-TB lineage4.2.2.2 None
ERR7737685 MDR-TB lineage4.2.2.2 None
ERR7737756 MDR-TB lineage4.2.2.2 None
ERR7737739 MDR-TB lineage4.2.2.2 None
ERR7737727 MDR-TB lineage4.2.2.2 None
ERR7737745 MDR-TB lineage4.2.2.2 None
ERR7737776 MDR-TB lineage4.2.2.2 None
ERR7737856 MDR-TB lineage4.2.2.2 None
ERR7737836 MDR-TB lineage4.2.2.2 None
ERR7737806 MDR-TB lineage4.2.2.2 None
ERR7737882 MDR-TB lineage4.2.2.2 None
ERR7737864 MDR-TB lineage4.2.2.2 None
ERR7737890 MDR-TB lineage4.2.2.2 None
ERR7737858 MDR-TB lineage4.2.2.2 None
ERR7737896 MDR-TB lineage4.2.2.2 None
ERR7737919 MDR-TB lineage4.2.2.2 None
ERR7737937 MDR-TB lineage4.2.2.2 None
ERR7737947 MDR-TB lineage4.2.2.2 None
ERR775342 MDR-TB lineage4.3.4.2 pe
ERR775350 MDR-TB lineage4.3.4.2 pe
ERR775328 MDR-TB lineage4.3.3 pe
ERR775338 MDR-TB lineage4.3.3 pe
ERR775351 MDR-TB lineage4.3.4.2 pe
ERR775358 MDR-TB lineage4.3.3 pe
ERR7910859 MDR-TB lineage4.3.3 None
ERR779885 MDR-TB lineage4.3.4.2 pe
ERR779890 MDR-TB lineage4.3.3 pe
ERR7910871 MDR-TB lineage4.3.4.2 pe
ERR7910860 MDR-TB lineage4.3.3 None
ERR7910880 MDR-TB lineage4.3.3 pe
ERR7911285 MDR-TB lineage1.1.1.1 vn
ERR7911009 MDR-TB lineage4.3.3 None
ERR7911012 MDR-TB lineage4.3.3 None
ERR9029854 Pre-XDR-TB lineage4.3.3 None
ERR7911367 MDR-TB lineage4.3.3 pe
ERR845937 MDR-TB lineage4.3.4.2 pe
ERR9027231 Pre-XDR-TB lineage3.1.2.1 None
ERR7911290 MDR-TB lineage2.1 vn
ERR7911376 MDR-TB lineage4.3.3 pe
ERR7911496 MDR-TB lineage1.1.1 vn
ERR9027233 Pre-XDR-TB lineage3.1.2.1 None
ERR9029849 MDR-TB lineage4.3.3 None
SRR1144792 MDR-TB lineage4.2 None
SRR10808671 MDR-TB lineage4.3.3 None
SRR1144767 MDR-TB None
SRR1013559 Pre-XDR-TB lineage2.2.2 None
SRR1144758 MDR-TB lineage4.2.2.2 None
SRR1146418 MDR-TB lineage4 None
SRR1144824 MDR-TB lineage4.2.2.2 None
SRR1146320 MDR-TB lineage4.2.2.2 None
SRR1146306 MDR-TB lineage4.2.2.2 None
SRR1146338 MDR-TB lineage4.2.2.2 None
SRR1162800 MDR-TB lineage4.2.2.2 None
SRR1162818 MDR-TB lineage4.2.2.2 None
SRR1162969 MDR-TB lineage4.2.2.2 None
SRR1162866 MDR-TB lineage4.4.1.1 None
SRR1162884 MDR-TB lineage4.4.1.1 None
SRR1162887 MDR-TB lineage4.4.1.1 None
SRR1163008 MDR-TB lineage4.2.2.2 None
SRR1163174 MDR-TB lineage4.2.2.2 None
SRR1163077 MDR-TB lineage4.4.1.1 None
SRR1163110 MDR-TB lineage4.2.2.2 None
SRR1165444 MDR-TB lineage4.4.1.1 None
SRR1163208 MDR-TB lineage4.2.2.2 None
SRR1165432 MDR-TB lineage4.2.2.2 None
SRR1163201 MDR-TB lineage4.2.2.2 None
SRR1167131 MDR-TB lineage4.2.2.2 None
SRR1166813 MDR-TB lineage4.2.2.2 None
SRR1166876 MDR-TB lineage4.2.2.2 None
SRR13870403 Pre-XDR-TB lineage4.3.3 None
SRR1167087 MDR-TB lineage4.4.1.1 None
SRR11972353 MDR-TB lineage1 None
SRR15368806 HR-TB lineage2.2.1.1 None
SRR15315838 MDR-TB lineage4.4.2 None
SRR16370478 MDR-TB lineage4.3.3 None
SRR2100766 Other lineage4.1.1 None
SRR2099974 MDR-TB lineage1.2.2.2 None
SRR16370489 MDR-TB lineage4.3.4.2 None
SRR17234904 MDR-TB lineage4.3.3 None
SRR2100231 MDR-TB lineage1.2.2.2 None
SRR2100511 Other lineage3 None
ERR4813731 MDR-TB lineage4.3.3 None
SRR2100918 HR-TB lineage3;lineage1.2.2.2 None
SRR21277842 HR-TB lineage2.2.1.1 None
SRR2100920 MDR-TB lineage1.2.2.2 None
SRR21277384 MDR-TB lineage2.2.1.1 None
ERR11082116 MDR-TB lineage4.2.2.2 None
ERR4813703 MDR-TB lineage4.3.3 None
ERR4813716 MDR-TB lineage4.3.3 None
ERR1200620 MDR-TB lineage4.2.2.2 et
SRR3082073 MDR-TB lineage4.2.2.2 None
SRR3085331 MDR-TB lineage4.2.2.2 None
SAMN02414946 MDR-TB lineage4.4.1.1 se
ERR3275847 MDR-TB lineage4.2.2.2 nl
ERR4815342 Other lineage1.2.1.2.1 None
ERR4812806 MDR-TB lineage4.3.3 pe
ERR4812752 MDR-TB lineage4.3.4.2 pe
ERR4812805 MDR-TB lineage4.3.3 None
ERR4812749 MDR-TB lineage4.3.3 pe
ERR4812776 MDR-TB lineage4.3.3 pe
ERR4812847 MDR-TB lineage4.3.3 None
ERR4812958 MDR-TB lineage4.3.3 pe
ERR4812877 MDR-TB lineage4.3.3 None
ERR4812964 MDR-TB lineage4.3.3 pe
ERR4813031 MDR-TB lineage4.3.3 None
ERR4813007 MDR-TB lineage4.3.3 None
ERR4813019 MDR-TB lineage4.3.3 None
ERR4813025 MDR-TB lineage4.3.3 None
ERR3148185 MDR-TB lineage4.1.2.1 mx
ERR4813053 MDR-TB lineage4.3.3 None
ERR4813073 MDR-TB lineage4.3.3 pe
ERR4813342 MDR-TB lineage4.3.3 pe
ERR4813079 MDR-TB lineage4.3.3 pe
ERR4813339 MDR-TB lineage4.3.3 None
ERR4813082 MDR-TB lineage4.3.3 pe
ERR4813321 MDR-TB lineage4 None
ERR4813364 MDR-TB lineage4.3.3 pe
ERR4813536 MDR-TB lineage4.3.3 None
ERR4813469 MDR-TB lineage4.3.4.2 pe
ERR4813449 MDR-TB lineage4.3.4.2 pe
ERR4813554 MDR-TB lineage4.3.4.2 None
ERR4813563 MDR-TB lineage4.3.3 None
ERR4813604 Pre-XDR-TB lineage4.3.3 None
ERR4813623 MDR-TB lineage4.3.3 None
ERR4813642 MDR-TB lineage4.3.3 None
ERR4813630 Pre-XDR-TB lineage4.3.4.2 None
SAMN03246623 MDR-TB lineage4.5 cn
ERR4813666 MDR-TB lineage4.3.4.2 None
ERR4813686 MDR-TB lineage4.3.3 None
SRR3732570 MDR-TB lineage4.3.3 None
SAMN02414888 MDR-TB lineage4.2.2.2 se
ERR2184353 MDR-TB lineage4.3.3 None
ERR2510194 MDR-TB lineage4.3.3 pe
ERR2510517 Pre-XDR-TB lineage3 pk
ERR2510593 MDR-TB lineage1.1.2 None
SRR5065494 Other lineage1.1.1.1 vn
SAMN02414899 MDR-TB lineage4.2.2.2 se
ERR2510170 MDR-TB lineage4.3.4.2 pe
ERR2179648 MDR-TB lineage4.5 cn
SRR5065371 Pre-XDR-TB lineage2.2 vn
ERR228152 Other lineage3 None
SRR5067280 HR-TB lineage1.1.1.1 vn
SRR5067323 Other lineage1.1.1.1 vn
ERR2510153 MDR-TB lineage4.3.3 pe
ERR2510217 MDR-TB lineage4.3.4.2 pe
ERR2510196 MDR-TB lineage4.3.4.2 pe
ERR2510202 MDR-TB lineage4.3.4.2 pe
SRR5065280 Other lineage1.1.1.1 vn
ERR2510232 MDR-TB lineage4.3.3 pe
ERR2510238 MDR-TB lineage4.3.3 pe
ERR2510224 MDR-TB lineage4.3.4.2 pe
ERR2510316 MDR-TB lineage1.1.2 pk
ERR2516668 Pre-XDR-TB lineage4.3.3 pe
ERR4820238 Other lineage1.2.1.2.1 None
ERR2516467 RR-TB lineage4.1.2.1 pe
ERR2516527 Pre-XDR-TB lineage4.3.3 None
ERR2516613 MDR-TB lineage2.2.1 nl
ERR2516628 Pre-XDR-TB lineage4.3.3 None
ERR233350 MDR-TB lineage4.2.2.2 et
ERR2653233 Pre-XDR-TB lineage4.3.3 None
ERR2653223 Pre-XDR-TB lineage4.3.3 None
ERR2652994 MDR-TB lineage4.1.2.1 None
ERR2653155 MDR-TB lineage4.1.2.1 None
ERR2653201 Pre-XDR-TB lineage4.3.3 None
ERR2653212 Pre-XDR-TB lineage4.3.3 None
ERR2653238 Pre-XDR-TB lineage4.3.3 None
ERR270664 MDR-TB lineage1.2.2.2 None
ERR2653237 Pre-XDR-TB lineage4.3.3 None
ERR270685 MDR-TB lineage1.2.2.2 None
ERR266549 Other lineage4.1.1 None
ERR2706948 MDR-TB lineage4.6.1.2 cd
ERR278531 HR-TB lineage3;lineage1.2.2.2 None
ERR278533 MDR-TB lineage1.2.2.2 None
ERR2707149 MDR-TB lineage4.6.2.2 cd
SRR5818577 MDR-TB lineage4.2.2.2 dj
ERR4822303 MDR-TB lineage4.2.2.2 de
SRR5709789 MDR-TB lineage1.1.1 th
SRR5818595 MDR-TB lineage4.2.2.2 dj