ERR751609
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR16370489
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11044613
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR26936980
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2099974
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR28045567
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR22461610
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910859
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034703
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813364
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751548
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR751571
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMN02414881
|
MDR-TB
|
lineage4.2.2.2
|
se
|
ERR6866134
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287426
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2653201
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653238
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
SRR28394259
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812632
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866164
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034748
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813025
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7737707
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7911012
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911009
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25827357
|
XDR-TB
|
lineage1.1.2;lineage2.2.1;lineage3
|
None
|
ERR13260682
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813686
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287749
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR2100920
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR6358920
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR7737947
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR12118043
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261925
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751509
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1167087
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4813630
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287572
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287573
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813666
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR25827444
|
XDR-TB
|
lineage3
|
None
|
ERR403355
|
Other
|
lineage4.1.1.1
|
None
|
ERR1034750
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260229
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR7737836
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR779890
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1162969
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393553
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393337
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR28393844
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393462
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510517
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR6865324
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13261914
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13290579
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290580
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737745
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SAMEA5569803
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1146418
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1162884
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1163174
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13260237
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13290506
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR1023344
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR386890
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
ERR4812958
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813342
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1144824
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13260617
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02414935
|
MDR-TB
|
lineage4.4.1.1
|
se
|
ERR4812752
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13260438
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394028
|
MDR-TB
|
lineage4
|
None
|
ERR3275847
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR28393676
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260639
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910871
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13260210
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812964
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13290391
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR30182359
|
Other
|
lineage3
|
None
|
ERR4822303
|
MDR-TB
|
lineage4.2.2.2
|
de
|
SRR5709789
|
MDR-TB
|
lineage1.1.1
|
th
|
SRR15368806
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR12117970
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1163201
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1023410
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13261922
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261675
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13290541
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR3287725
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6879047
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287766
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR15315838
|
MDR-TB
|
lineage4.4.2
|
None
|
ERR117667
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR6397154
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2510224
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR21732328
|
HR-TB
|
lineage1.1.1
|
None
|
ERR6866333
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR2100766
|
Other
|
lineage4.1.1.1
|
None
|
SRR28393308
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR845937
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751549
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR6879035
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
None
|
ERR4812847
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261885
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4815342
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR13870403
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR751543
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1146338
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1162818
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2652994
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2510170
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR29081653
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866863
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13261892
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287685
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812064
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4812567
|
MDR-TB
|
lineage4
|
pe
|
SAMN02414888
|
MDR-TB
|
lineage4.2.2.2
|
se
|
ERR2707149
|
MDR-TB
|
lineage4.6.2.2
|
cd
|
ERR775351
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR9029849
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516527
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2516668
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR3287747
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813469
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4178154
|
HR-TB
|
lineage4.3.3
|
None
|
ERR7911285
|
MDR-TB
|
lineage1.1.1.1
|
vn
|
SRR1163008
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR6359063
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR13261618
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR2100231
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR4830796
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR29093272
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13276437
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1165432
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011968
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13296451
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144758
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2516613
|
MDR-TB
|
lineage2.2.1
|
nl
|
ERR233350
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR751595
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287786
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4829756
|
MDR-TB
|
lineage4.3.4.2
|
it
|
ERR7737756
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163110
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR22249917
|
Other
|
lineage3
|
None
|
ERR11043936
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR26937089
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1144792
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13260128
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261600
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261648
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812776
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287374
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260009
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4011969
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3287803
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6879033
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751351
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2510196
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13260230
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260693
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13289721
|
MDR-TB
|
lineage3
|
None
|
ERR2706948
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
SRR1146320
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR5065280
|
Other
|
lineage1.1.1.1
|
vn
|
ERR4813536
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865695
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4011973
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR9029854
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2510217
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13290477
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393429
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR270685
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR13260188
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4831240
|
MDR-TB
|
lineage4.2.2.2
|
de
|
ERR4831239
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR6397199
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13276180
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR3732570
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13290578
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393563
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034757
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
pe
|
ERR4812356
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4820238
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR11662528
|
MDR-TB
|
lineage2.1
|
None
|
ERR13260208
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261904
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR26937120
|
MDR-TB
|
lineage1.1.1
|
None
|
ERR13290390
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290393
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393843
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393460
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393767
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393365
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28394120
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1166876
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13261915
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393904
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393469
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394092
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6358757
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4812806
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7911367
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751482
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751565
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13290474
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290509
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR751616
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13290581
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13260652
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1013559
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11043787
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11044007
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393431
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261933
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516628
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1163208
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11049567
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR12118056
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4829824
|
Pre-XDR-TB
|
lineage3
|
it
|
ERR7910860
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393412
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461585
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29126587
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR12117909
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR12117916
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR21277384
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR28393588
|
MDR-TB
|
lineage4.1.2.1;lineage4.8
|
None
|
ERR13260135
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR2100918
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
ERR2184353
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7737739
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR7517834
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13276333
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR5818595
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
SRR26936977
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02414946
|
MDR-TB
|
lineage4.4.1.1
|
se
|
SRR22461695
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6397171
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290475
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2510593
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4813019
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR30182504
|
Other
|
lineage4.5
|
None
|
ERR4813716
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287872
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4828868
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13260227
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812749
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR11662448
|
MDR-TB
|
lineage1.1.1
|
None
|
ERR7737685
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4829004
|
MDR-TB
|
lineage4.2.2.2
|
it
|
ERR7737864
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR6865602
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751582
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR11972353
|
MDR-TB
|
lineage1.2.2
|
None
|
ERR13260212
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260211
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813623
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11042995
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13059967
|
MDR-TB
|
lineage4.7
|
None
|
SRR7781506
|
MDR-TB
|
lineage4.2.2.2
|
None
|
DRR184619
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR6866131
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1165444
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR29289134
|
MDR-TB
|
lineage3
|
None
|
SRR29093289
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR26937105
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7737644
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4813082
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29017537
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11082116
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28351461
|
MDR-TB
|
lineage3
|
None
|
ERR4011954
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29096381
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR7781499
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR7737806
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737882
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737890
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4811913
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29748787
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7737727
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR266549
|
Other
|
lineage4.1.1.1
|
None
|
ERR2510232
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751416
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29093311
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR9027233
|
Pre-XDR-TB
|
lineage3.1.2.1
|
None
|
ERR13260219
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287363
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4812805
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7737919
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11044333
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1167131
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737858
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737937
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1144767
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR1034798
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813604
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813731
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510202
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR5065494
|
Other
|
lineage1.1.1.1
|
vn
|
ERR4812877
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4830839
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR4800575
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4025035
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4011963
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7339138
|
Other
|
lineage1.1.1.1
|
None
|
ERR4813079
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMEA5569996
|
MDR-TB
|
lineage4.3.2;lineage4.3.3
|
None
|
ERR4011951
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4828843
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737682
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28351662
|
MDR-TB
|
lineage3
|
None
|
ERR775338
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813073
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1199111
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
ERR278531
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
SRR17234904
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11043789
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR2516467
|
RR-TB
|
lineage4.1.2.1
|
pe
|
ERR2510316
|
MDR-TB
|
lineage1.1.2
|
pk
|
ERR386892
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR4813339
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2653223
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13276239
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4813563
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813642
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813703
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1162800
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR775350
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4796795
|
Pre-XDR-TB
|
lineage4.2.2
|
in
|
ERR7737856
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR8651597
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR9027231
|
Pre-XDR-TB
|
lineage3.1.2.1
|
None
|
ERR775328
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR28393917
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260161
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4024938
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR270664
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR6879034
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02414962
|
MDR-TB
|
lineage4.2.2.2
|
se
|
SRR26558623
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR7737680
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737896
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR12117934
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR5065371
|
Pre-XDR-TB
|
lineage2.2.2
|
vn
|
SRR5818577
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
SRR1146306
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393969
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393943
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393314
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1163077
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR751365
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287570
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4830834
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR21277842
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR25827641
|
XDR-TB
|
lineage2.2.1;lineage4
|
None
|
ERR3287813
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287732
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287818
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR3085331
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13261923
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7737776
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR775358
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2510153
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4799189
|
Other
|
lineage4.1.2.1
|
in
|
SRR3082073
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4828996
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29094054
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290539
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR26937094
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13260224
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813449
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR29096320
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393618
|
MDR-TB
|
lineage4
|
None
|
ERR6397151
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28394183
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260168
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4011964
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3287854
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2653237
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653155
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4828989
|
MDR-TB
|
lineage4.2.2.2
|
it
|
SRR21690975
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR751437
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813053
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1200620
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR7911376
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR11044024
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR24256150
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR2677447
|
MDR-TB
|
lineage4.2.2.2
|
de
|
ERR4828871
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR10808671
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4553783
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR4813031
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751591
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813554
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017143
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR7910880
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1166813
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011965
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR228152
|
Other
|
lineage3
|
None
|
SRR16370478
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR2100511
|
Other
|
lineage3
|
None
|
ERR13260195
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911496
|
MDR-TB
|
lineage1.1.1
|
vn
|
SRR1162866
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR3148185
|
MDR-TB
|
lineage4.1.2.1
|
mx
|
ERR6358868
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR13260193
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2653212
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4830782
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SAMN03246623
|
MDR-TB
|
lineage4.5
|
cn
|
ERR10561954
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751436
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR5067280
|
HR-TB
|
lineage1.1.1.1
|
vn
|
ERR2510238
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR28393364
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR12860986
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR775342
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR278533
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR13260702
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7737633
|
MDR-TB
|
lineage1.1.1.1
|
None
|
ERR13290507
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR13260696
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4830809
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290476
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2653233
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR5067323
|
Other
|
lineage1.1.1.1
|
vn
|
SAMN02414899
|
MDR-TB
|
lineage4.2.2.2
|
se
|
ERR13260697
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287691
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13195616
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4276911
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13267441
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510194
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7911290
|
MDR-TB
|
lineage2.1
|
vn
|
ERR4811979
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813007
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287610
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR779885
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR12117983
|
MDR-TB
|
lineage4.3.3
|
None
|