Rv0701 - c.93C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
8 Sensitive
0 RR-TB
11 HR-TB
84 MDR-TB
8 Pre-XDR-TB
2 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 87 |
| lineage4.1.1.2 | 24 |
| lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 115 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12080326 | MDR-TB | lineage2.2.1 | None | SRR30034924 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR12080275 | MDR-TB | lineage2.2.1 | None | SRR12080341 | MDR-TB | lineage2.2.1 | None | SRR12080328 | MDR-TB | lineage2.2.1 | None | SRR12080290 | MDR-TB | lineage2.2.1 | None | SRR12080274 | MDR-TB | lineage2.2.1 | None | SRR30034923 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR12080302 | MDR-TB | lineage2.2.1 | None | SRR12080281 | MDR-TB | lineage2.2.1 | None | SRR12080319 | MDR-TB | lineage2.2.1 | None | SRR12080296 | MDR-TB | lineage2.2.1 | None | SRR30034918 | MDR-TB | lineage4.1.1.2 | None | SRR12080277 | HR-TB | lineage2.2.1 | None | SRR12080310 | HR-TB | lineage2.2.1 | None | SRR12080294 | MDR-TB | lineage2.2.1 | None | SRR12080307 | MDR-TB | lineage2.2.1 | None | SRR12080312 | MDR-TB | lineage2.2.1 | None | SRR12080327 | MDR-TB | lineage2.2.1 | None | SRR30034917 | MDR-TB | lineage4.1.1.2 | None | SRR12080285 | MDR-TB | lineage2.2.1 | None | SRR12080318 | MDR-TB | lineage2.2.1 | None | SRR12080308 | MDR-TB | lineage2.2.1 | None | SRR12080315 | MDR-TB | lineage2.2.1 | None | SRR12080325 | MDR-TB | lineage2.2.1 | None | SRR12080316 | MDR-TB | lineage2.2.1 | None | SRR12080278 | MDR-TB | lineage2.2.1 | None | SRR30034926 | MDR-TB | lineage4.1.1.2 | None | SRR30182764 | Sensitive | lineage2.2.1 | None | SRR30034920 | MDR-TB | lineage4.1.1.2 | None | SRR12080313 | MDR-TB | lineage2.2.1 | None | SRR12080343 | HR-TB | lineage2.2.1 | None | SRR12080311 | MDR-TB | lineage2.2.1 | None | SRR30182850 | Sensitive | lineage2.2.1 | None | SRR12080317 | MDR-TB | lineage2.2.1 | None | ERR3797085 | Other | lineage4.9 | None | SRR12080322 | MDR-TB | lineage2.2.1 | None | SRR30034910 | MDR-TB | lineage4.1.1.2 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR30034912 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR12080309 | MDR-TB | lineage2.2.1 | None | SRR12080335 | MDR-TB | lineage2.2.1 | None | SRR30182445 | Sensitive | lineage2.2.1 | None | SRR12080301 | MDR-TB | lineage2.2.1 | None | SRR12080323 | MDR-TB | lineage2.2.1 | None | SRR12080276 | MDR-TB | lineage2.2.1 | None | SRR12080297 | MDR-TB | lineage2.2.1 | None | SRR8237326 | HR-TB | lineage2.2.1 | np | SRR8237332 | HR-TB | lineage2.2.1 | np | ERR4972539 | Pre-XDR-TB | lineage4.1.1.2 | None | ERR4972586 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR12080332 | HR-TB | lineage2.2.1 | None | SRR12080293 | MDR-TB | lineage2.2.1 | None | SRR12080273 | MDR-TB | lineage2.2.1 | None | SRR12080298 | MDR-TB | lineage2.2.1 | None | SRR12080279 | MDR-TB | lineage2.2.1 | None | SRR12080288 | HR-TB | lineage2.2.1 | None | SRR12080339 | MDR-TB | lineage2.2.1 | None | SRR12080337 | MDR-TB | lineage2.2.1 | None | SRR12080271 | MDR-TB | lineage2.2.1 | None | SRR30034911 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR30034919 | XDR-TB | lineage4.1.1.2 | None | SRR21732776 | Sensitive | lineage2.2.1 | None | SRR30034928 | MDR-TB | lineage4.1.1.2 | None | SRR30034909 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR30034915 | MDR-TB | lineage4.1.1.2 | None | SRR12080340 | MDR-TB | lineage2.2.1 | None | SRR30034913 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR12080280 | MDR-TB | lineage2.2.1 | None | SRR30034925 | MDR-TB | lineage4.1.1.2 | None | SRR12080291 | MDR-TB | lineage2.2.1 | None | SRR12080304 | MDR-TB | lineage2.2.1 | None | SRR30034916 | MDR-TB | lineage4.1.1.2 | None | SRR29094374 | MDR-TB | lineage4.1.1.2 | None | SRR12080284 | MDR-TB | lineage2.2.1 | None | ERR8773591 | MDR-TB | lineage2.2.1 | None | SRR12080270 | MDR-TB | lineage2.2.1 | None | SRR12080338 | MDR-TB | lineage2.2.1 | None | SRR30034914 | MDR-TB | lineage4.1.1.2 | None | SRR12080334 | MDR-TB | lineage2.2.1 | None | SRR28170745 | Sensitive | lineage2.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR12080269 | HR-TB | lineage2.2.1 | None | SRR12080333 | MDR-TB | lineage2.2.1 | None | SRR12080292 | MDR-TB | lineage2.2.1 | None | SRR12080303 | MDR-TB | lineage2.2.1 | None | SRR30034921 | XDR-TB | lineage4.1.1.2 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR12080305 | MDR-TB | lineage2.2.1 | None | SRR12080289 | MDR-TB | lineage2.2.1 | None | SRR12080268 | MDR-TB | lineage2.2.1 | None | SRR12080295 | MDR-TB | lineage2.2.1 | None | SRR12080336 | MDR-TB | lineage2.2.1 | None | SRR12080299 | HR-TB | lineage2.2.1 | None | SRR12080330 | MDR-TB | lineage2.2.1 | None | SRR30034927 | MDR-TB | lineage4.1.1.2 | None | SRR12080331 | MDR-TB | lineage2.2.1 | None | SRR30034929 | MDR-TB | lineage4.1.1.2 | None | SRR29055500 | Sensitive | lineage2.2.1 | None | SRR30034922 | MDR-TB | lineage4.1.1.2 | None | SRR12080342 | MDR-TB | lineage2.2.1 | None | SRR12080344 | HR-TB | lineage2.2.1 | None | SRR12080282 | MDR-TB | lineage2.2.1 | None | SRR12080324 | MDR-TB | lineage2.2.1 | None | ERR9892002 | Sensitive | lineage2.2.1 | None | SRR12080306 | MDR-TB | lineage2.2.1 | None | SRR12080314 | MDR-TB | lineage2.2.1 | None | SRR12080287 | MDR-TB | lineage2.2.1 | None | ERR8773589 | MDR-TB | lineage2.2.1 | None | SRR12080283 | MDR-TB | lineage2.2.1 | None | SRR12080286 | MDR-TB | lineage2.2.1 | None | SRR12080272 | MDR-TB | lineage2.2.1 | None | SRR12080300 | MDR-TB | lineage2.2.1 | None | SRR12080320 | MDR-TB | lineage2.2.1 | None | SRR12080329 | MDR-TB | lineage2.2.1 | None |
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