Rv1129c - c.-89C>T


Drug resistance types
48 Sensitive 2 RR-TB 9 HR-TB 80 MDR-TB 49 Pre-XDR-TB 5 XDR-TB 10 Other
lineage Counts
lineage Count
lineage4.6.1.2 29
lineage2.2.1 74
lineage2.2.2 8
lineage1.1 2
lineage4.1.2.1 5
lineage4.2.2.2 10
lineage3.1.2.1 7
lineage1.1.3.1 1
lineage3 19
lineage3.1.3 1
lineage5.2 2
lineage4.3.3 7
lineage3.1.1 2
lineage1.2.1 1
lineage4.2.1.1 1
lineage4.2.1 6
lineage2.1 2
lineage4.3.4.2 5
lineage4.3.4.2.1 1
lineage1.1.1 2
lineage4.4.2 1
lineage4.4.1.2 2
lineage4.4 1
lineage1.2.1.2 1
lineage4.1.3 1
lineage4.8 1
lineage5.1.4 1
lineage1.2.1.2.1 2
lineage4.2.2.1 1
lineage2.2.1.1 1
lineage3.1.2 1
La1.8.1 1
lineage5.1.1 1
lineage4.4.1.1 1
lineage1.2.2.2 1
lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 203
Geographic prevalence
Country level data for this variant is available for 82 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2707123 MDR-TB lineage4.6.1.2 cd
ERR2707057 MDR-TB lineage4.6.1.2 cd
SRR5073547 Other lineage2.2.1 vn
ERR3014592 Pre-XDR-TB lineage4.6.1.2 None
SRR24112528 RR-TB lineage2.2.2 None
SRR5073582 Sensitive lineage2.2.1 vn
ERR1654682 MDR-TB lineage4.6.1.2 None
ERR551019 MDR-TB lineage2.2.1 None
SRR1723453 MDR-TB lineage2.2.1 cn
ERR775779 HR-TB lineage1.1 th
ERR3639817 MDR-TB lineage2.2.1 None
SRR25207257 Pre-XDR-TB lineage2.2.1 None
ERR4829743 Sensitive lineage4.1.2.1 None
SRR5065250 MDR-TB lineage2.2.1 vn
ERR9117676 Sensitive lineage4.2.2.2 None
ERR4818681 Sensitive lineage3.1.2.1 None
SRR6650427 Sensitive lineage1.1.3.1 None
SAMEA2533639 MDR-TB lineage2.2.1 uz
ERR2446183 MDR-TB lineage4.2.2.2 nl
SRR6824629 Pre-XDR-TB lineage2.2.1 cn
SRR28409375 Other lineage3 None
SRR28339300 Pre-XDR-TB lineage2.2.1 None
ERR2510587 Pre-XDR-TB lineage3 pk
ERR3335774 Pre-XDR-TB lineage3.1.3 pk
ERR2704810 Sensitive lineage5.2 fr
ERR4830799 MDR-TB lineage4.2.2.2 et
ERR1199096 MDR-TB lineage4.6.1.2 cd
SRR21276916 XDR-TB lineage2.2.1 None
SRR6824580 Pre-XDR-TB lineage2.2.1 cn
SRR10397130 Pre-XDR-TB lineage2.2.1 None
ERR12268466 Sensitive lineage4.1.2.1 None
ERR2707012 MDR-TB lineage4.6.1.2 cd
ERR4276913 MDR-TB lineage3 None
ERR4830845 MDR-TB lineage4.2.2.2 et
ERR4800165 Pre-XDR-TB lineage4.3.3 None
ERR11798641 MDR-TB lineage4.3.3 None
SRR6824569 MDR-TB lineage2.2.1 cn
SRR7070198 Sensitive lineage3.1.2.1 None
ERR11050351 Sensitive lineage3.1.1 None
SRR10809040 Sensitive lineage4.1.2.1 None
ERR1654674 MDR-TB lineage4.6.1.2 None
SRR25515273 Sensitive lineage2.2.1 None
ERR8976088 Pre-XDR-TB lineage2.2.2 None
ERR5865286 Pre-XDR-TB lineage2.2.1 None
SRR21732530 Other lineage1.2.1 None
ERR4821374 Sensitive lineage3.1.2.1 gb
SRR21709858 Sensitive lineage2.2.1 None
SRR14782415 Other lineage4.2.1.1 None
ERR551020_ERR551019 MDR-TB lineage2.2.1 None
SRR14801292 MDR-TB lineage4.2.1 None
SRR21887658 MDR-TB lineage2.2.1 None
SRR14801452 MDR-TB lineage4.2.1 None
ERR4818162 Sensitive lineage3.1.2.1 None
ERR2145524 MDR-TB lineage4.2.2.2 None
ERR751993 Sensitive lineage2.1 th
ERR751837 MDR-TB lineage2.2.1 th
ERR4822365 MDR-TB lineage2.2.1 None
ERR718273 MDR-TB lineage2.2.1 th
ERR9286060 Sensitive lineage4.3.4.2 None
ERR3794457 Pre-XDR-TB lineage2.2.1 None
ERR5917664 MDR-TB lineage2.2.1 by
SRR19428534 Other lineage3.1.1 None
SRR11662677 Pre-XDR-TB lineage2.1 None
SRR1723846 Pre-XDR-TB lineage2.2.1 cn
ERR4814365 Sensitive lineage4.3.4.2.1 None
ERR4816149 HR-TB lineage3 gb
ERR9993169 XDR-TB lineage2.2.2 None
ERR775796 Sensitive lineage1.1.1 th
SRR15368778 Sensitive lineage4.4.2 None
SRR14165008 Sensitive lineage4.4.1.2 None
ERR6397195 MDR-TB lineage3 None
ERR2707024 MDR-TB lineage4.6.1.2 cd
SRR6824527 Pre-XDR-TB lineage2.2.1 cn
ERR3273145 MDR-TB lineage2.2.1 None
SRR14165112 Sensitive lineage4.4.1.2 None
SRR15315964 Pre-XDR-TB lineage4.4 None
SRR24112527 MDR-TB lineage2.2.2 None
ERR751762 Sensitive lineage1.2.1.2 th
SRR6045855 Sensitive lineage3 None
ERR2517569 MDR-TB lineage4.2.2.2 nl
SRR15315994 XDR-TB lineage2.2.1 None
ERR9634306 Sensitive lineage4.1.2.1 None
SRR1723512 HR-TB lineage2.2.1 None
SRR3724965 MDR-TB lineage4.1.3 ci
SRR20970002 Pre-XDR-TB lineage2.2.1 None
SRR25827852 XDR-TB lineage3 None
ERR11775884 Sensitive lineage4.3.4.2 None
SRR28339299 Pre-XDR-TB lineage2.2.1 None
SRR28045525 Sensitive lineage3 None
SRR28045524 Sensitive lineage3 None
SRR28646098 Pre-XDR-TB lineage4.8 None
SRR6824708 MDR-TB lineage2.2.1 cn
ERR2707020 MDR-TB lineage4.6.1.2 cd
ERR1654669 MDR-TB lineage4.6.1.2 None
SRR20970017 HR-TB lineage2.2.1 None
SRR1723513 Pre-XDR-TB lineage2.2.1 None
ERR9117814 Sensitive lineage3 None
ERR2706925 MDR-TB lineage4.6.1.2 cd
ERR1203076 Sensitive lineage5.1.4 gh
SRR21887728 Pre-XDR-TB lineage2.2.1 None
ERR3794451 MDR-TB lineage2.2.1 None
SRR6831904 MDR-TB lineage2.2.1 None
ERR114424 Sensitive lineage3 None
ERR4822300 MDR-TB lineage3 de
ERR11067711 Sensitive lineage4.1.2.1 None
ERR4797537 Pre-XDR-TB lineage2.2.1 in
ERR1654675 MDR-TB lineage4.6.1.2 None
ERR7911158 MDR-TB lineage2.2.1 vn
SRR15014726 MDR-TB lineage4.3.3 None
SRR1710089 Sensitive lineage2.2.1 cn
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR2707026 MDR-TB lineage4.6.1.2 cd
ERR1199105 MDR-TB lineage4.6.1.2 cd
SRR14801480 MDR-TB lineage4.2.1 None
ERR4831364 Other lineage3 de
SRR16088585 MDR-TB lineage2.2.1 None
ERR2513488 MDR-TB lineage4.3.3 gb
ERR718247 HR-TB lineage1.1.1 th
SRR7535044 Pre-XDR-TB lineage4.6.1.2 None
SRR16370557 MDR-TB lineage2.2.1 None
ERR4808905 XDR-TB lineage2.2.2 za
ERR4810476 Pre-XDR-TB lineage2.2.1 cn
SRR12006685 Sensitive lineage1.2.1.2.1 None
ERR2653199 Pre-XDR-TB lineage4.3.4.2 None
ERR4799493 Pre-XDR-TB lineage3 in
SRR20969803 HR-TB lineage2.2.1 None
ERR3639755 Pre-XDR-TB lineage2.2.1 None
ERR1654693 MDR-TB lineage4.6.1.2 None
ERR552091 Other lineage4.2.2.1 de
ERR2707060 MDR-TB lineage4.6.1.2 cd
ERR2706921 MDR-TB lineage4.6.1.2 cd
SRR13870424 Pre-XDR-TB lineage4.3.4.2 None
SRR10305652 MDR-TB lineage2.2.1 None
SRR10306004 Pre-XDR-TB lineage2.2.1 None
SRR21277253 RR-TB lineage2.2.1.1 None
ERR2706990 MDR-TB lineage4.6.1.2 cd
SRR1723844 HR-TB lineage2.2.1 None
SRR7070675 Sensitive lineage3.1.2.1 None
SRR25207091 Pre-XDR-TB lineage2.2.1 None
ERR2516712 MDR-TB lineage4.6.1.2 None
SRR6356933 MDR-TB lineage2.2.1 None
ERR2516972 MDR-TB lineage4.2.2.2 gb
SRR16370314 MDR-TB lineage2.2.1 None
ERR3275336 MDR-TB lineage4.2.2.2 nl
ERR3794459 MDR-TB lineage2.2.1 None
ERR2653145 Pre-XDR-TB lineage4.3.3 None
ERR1654664 MDR-TB lineage4.6.1.2 None
ERR5865285 Pre-XDR-TB lineage2.2.1 None
DRR189033 Sensitive lineage2.2.1 None
ERR4809357 Pre-XDR-TB lineage2.2.2 za
DRR130060 MDR-TB lineage2.2.1 None
ERR4811346 MDR-TB lineage2.2.1 cn
ERR1199103 MDR-TB lineage4.6.1.2 cd
SAMN03246267 Pre-XDR-TB lineage2.2.1 cn
SRR25207341 MDR-TB lineage2.2.1 None
SRR6824530 Pre-XDR-TB lineage2.2.1 cn
ERR4821070 Sensitive lineage3 None
ERR2510368 Pre-XDR-TB lineage3 pk
ERR4797844 Pre-XDR-TB lineage3.1.2 in
ERR2707170 MDR-TB lineage5.2 cd
ERR4830805 MDR-TB lineage4.2.2.2 et
SAMN03246565 Pre-XDR-TB lineage2.2.1 cn
SRR1791706 Other La1.8.1 None
ERR7911182 MDR-TB lineage2.2.1 vn
ERR108458 MDR-TB lineage2.2.1 ru
SRR2100273 Sensitive lineage3 None
SRR6964483 Sensitive lineage3 None
ERR8976072 Pre-XDR-TB lineage2.2.2 None
ERR11050141 Sensitive lineage3 None
SRR1723847 Pre-XDR-TB lineage2.2.1 cn
ERR4817803 Other lineage4.2.2.2 None
SRR14807477 Pre-XDR-TB lineage2.2.1 None
ERR3256162 Other lineage1.2.1.2.1 ph
ERR1082120 HR-TB lineage5.1.1 gh
ERR2707084 MDR-TB lineage4.6.1.2 cd
DRR034482 Sensitive lineage2.2.1 None
ERR2512957 Sensitive lineage3.1.2.1 gb
ERR2514687 Sensitive lineage3.1.2.1 gb
ERR11466425 HR-TB lineage4.4.1.1 None
SRR16370527 Pre-XDR-TB lineage2.2.1 None
ERR9286059 Sensitive lineage4.3.4.2 None
ERR6359008 Sensitive lineage4.6.1.2 None
SRR1723845 Pre-XDR-TB lineage2.2.1 None
ERR718556 Sensitive lineage1.1 th
SRR6831854 Pre-XDR-TB lineage2.2.1 None
SRR6824471 Pre-XDR-TB lineage2.2.1 cn
ERR2706919 MDR-TB lineage4.6.1.2 cd
SRR7069156 MDR-TB lineage4.3.3 None
ERR2660478 Sensitive lineage1.2.2.2 None
ERR2707132 MDR-TB lineage4.6.1.2 cd
ERR4813437 MDR-TB lineage2.2.1 pe
SRR10305617 Pre-XDR-TB lineage2.2.1 None
SRR10305615 Pre-XDR-TB lineage2.2.1 None
SRR14801420 MDR-TB lineage4.2.1 None
ERR4811279 Sensitive lineage4.2.2 cn
ERR5865287 Pre-XDR-TB lineage2.2.1 None
SRR24112526 MDR-TB lineage2.2.2 None
ERR137284 MDR-TB lineage4.3.3 ru
ERR1199098 MDR-TB lineage4.6.1.2 cd
ERR2707070 MDR-TB lineage4.6.1.2 cd
SRR22048551 MDR-TB lineage4.2.1 None
ERR1199113 MDR-TB lineage4.6.1.2 cd
SRR6480570 Sensitive lineage2.2.1 None