lineage | Count |
---|---|
lineage4.1.2.1 | 10 |
lineage2.2.1 | 60 |
lineage4.2.2 | 2 |
lineage4.7 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.6.1.2 | 16 |
lineage3.1.2.1 | 2 |
lineage2.2.1.1 | 3 |
lineage4.6.1.1 | 1 |
lineage1.1.2 | 3 |
lineage4.2.2.2 | 1 |
lineage2.2.2 | 4 |
lineage4.4.1.1 | 4 |
lineage4.5 | 2 |
lineage4.2.1.1 | 1 |
lineage4.8 | 3 |
lineage3.1.2 | 2 |
lineage3 | 3 |
lineage5.1.1 | 1 |
lineage4.9 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.3 | 1 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 124 |
ID | Drug resistance | Lineage | Country iso2 | SRR11033672 | Sensitive | lineage4.1.2.1 | None | ERR13284482 | MDR-TB | lineage2.2.1 | None | ERR13252536 | Sensitive | lineage4.2.2 | None | ERR4872335 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255979 | Sensitive | lineage4.7 | None | ERR8773598 | MDR-TB | lineage2.2.1 | None | ERR8773596 | MDR-TB | lineage2.2.1 | None | SRR15368789 | MDR-TB | lineage2.2.1 | None | SRR6824299 | MDR-TB | lineage2.2.1;lineage4.5 | cn | SRR1062872 | MDR-TB | lineage4.6.1.2 | None | SRR21685105 | Other | lineage3.1.2.1 | None | SRR5067638 | Other | lineage2.2.1.1 | vn | DRR188484 | HR-TB | lineage2.2.1 | None | ERR11465530 | Sensitive | lineage4.1.2.1 | None | SRR18913744 | Sensitive | lineage4.1.2.1 | None | ERR1199045 | Sensitive | lineage4.6.1.1 | ug | SRR960958 | Other | lineage2.2.1 | cn | SRR1723609 | MDR-TB | lineage2.2.1 | None | ERR386951 | Sensitive | lineage1.1.2 | None | SRR1049597 | RR-TB | lineage4.6.1.2 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SRR1174312 | MDR-TB | lineage4.6.1.2 | None | SRR1723610 | Pre-XDR-TB | lineage2.2.1 | None | SRR3142013 | MDR-TB | lineage4.2.2.2 | None | SRR20969456 | MDR-TB | lineage2.2.1.1 | None | SRR671801 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13289361 | MDR-TB | lineage2.2.2 | None | ERR4828845 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13266438 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831794 | MDR-TB | lineage2.2.1 | None | SRR14782223 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665933 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723936 | Sensitive | lineage4.5 | None | ERR13193998 | Pre-XDR-TB | lineage2.2.2 | None | SRR28385880 | Pre-XDR-TB | lineage2.2.2 | None | SRR18714764 | Sensitive | lineage4.2.1.1 | None | SRR25206906 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119743 | MDR-TB | lineage2.2.1.1 | None | SRR28409661 | Sensitive | lineage4.8 | None | SRR21277231 | Sensitive | lineage2.2.1 | None | SRR14802282 | MDR-TB | lineage2.2.1 | None | SRR21733186 | Sensitive | lineage3.1.2 | None | ERR2179649 | Sensitive | lineage4.5 | None | ERR4800177 | Sensitive | lineage3 | None | SRR6831736 | Sensitive | lineage4.1.2.1 | None | SRR1049562 | MDR-TB | lineage4.6.1.2 | None | ERR040125 | MDR-TB | lineage4.6.1.2 | ug | SRR6153238 | Sensitive | lineage2.2.1 | ca | ERR4831443 | Pre-XDR-TB | lineage3.1.2 | pk | SRR29093952 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798526 | Sensitive | lineage2.2.1 | in | SRR25534564 | Other | lineage2.2.1 | None | SRR1049561 | MDR-TB | lineage4.6.1.2 | None | SRR1062887 | RR-TB | lineage4.6.1.2 | None | SRR2328057 | Pre-XDR-TB | lineage2.2.1 | au | SRR25515756 | Sensitive | lineage2.2.1 | None | SRR28351632 | Pre-XDR-TB | lineage2.2.1 | None | ERR550843 | MDR-TB | lineage2.2.1 | None | ERR5865690 | MDR-TB | lineage2.2.1 | None | SRR1049598 | RR-TB | lineage4.6.1.2 | None | SRR14519947 | Sensitive | lineage2.2.1 | None | SRR23938607 | MDR-TB | lineage2.2.1 | None | ERR13291827 | Sensitive | lineage4.8 | None | ERR10762257 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743409 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824476 | MDR-TB | lineage2.2.1 | cn | ERR13262023 | Pre-XDR-TB | lineage2.2.1 | None | ERR3170484 | Sensitive | lineage5.1.1 | gh | SRR24256141 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866461 | MDR-TB | lineage2.2.1 | None | SRR10397269 | Sensitive | lineage4.1.2.1 | None | ERR11775852 | Sensitive | lineage4.9 | None | SRR28239639 | MDR-TB | lineage2.2.1 | None | SRR28351472 | Pre-XDR-TB | lineage2.2.1 | None | ERR278592 | Sensitive | lineage1.1.2 | None | SRR7781497 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR2100965 | Sensitive | lineage1.1.2 | None | SRR5709924 | HR-TB | lineage1.2.2.2 | th | SRR28498549 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368835 | HR-TB | lineage2.2.1 | None | ERR11466289 | Sensitive | lineage4.1.2.1 | None | SAMN02380983 | MDR-TB | lineage4.6.1.2 | ug | SRR1140583 | RR-TB | lineage4.6.1.2 | None | DRR188894 | Sensitive | lineage4.2.2 | None | SRR28706427 | MDR-TB | lineage2.2.1 | None | ERR7975661 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173372 | MDR-TB | lineage4.6.1.2 | None | SRR21276926 | HR-TB | lineage2.2.1 | None | SRR29273811 | MDR-TB | lineage4.4.1.1 | None | SRR29385276 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035149 | RR-TB | lineage3 | None | ERR552343 | MDR-TB | lineage2.2.1 | None | SRR6824670 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13285744 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239728 | HR-TB | lineage4.8 | None | SRR29096476 | Sensitive | lineage3 | None | ERR13289363 | MDR-TB | lineage2.2.2 | None | SRR10040286 | MDR-TB | lineage2.2.1 | None | SRR1140569 | MDR-TB | lineage4.6.1.2 | None | SAMN02380997 | RR-TB | lineage4.6.1.2 | ug | ERR13284435 | MDR-TB | lineage2.2.1 | None | SRR29538894 | MDR-TB | lineage4.3.3 | None | ERR13265894 | Sensitive | lineage2.2.1 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29267196 | Sensitive | lineage2.2.1 | None | ERR13292236 | Sensitive | lineage4.1.2.1 | None | DRR034376 | Sensitive | lineage2.2.1 | None | ERR13245730 | HR-TB | lineage2.2.1 | None | ERR8665932 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277858 | MDR-TB | lineage2.2.1 | None | SRR29539800 | MDR-TB | lineage2.2.1 | None | SRR15368834 | HR-TB | lineage2.2.1 | None | ERR10680071 | MDR-TB | lineage4.4.1.1 | None | DRR474201 | HR-TB | lineage2.2.1 | None | ERR13291341 | Sensitive | lineage3.1.2.1 | None | SRR21276927 | HR-TB | lineage2.2.1 | None | SRR27069462 | Pre-XDR-TB | lineage2.2.1 | None | SRR28409597 | Sensitive | lineage4.1.2.1 | None | SRR26399299 | HR-TB | lineage2.1 | None | SRR10305650 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR18912061 | Sensitive | lineage4.1.2.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | ERR13292461 | Sensitive | lineage4.1.2.1 | None |
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