Rv1484 - c.-839G>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
113 Sensitive
12 RR-TB
0 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 109 |
| lineage2.2.1;lineage4.4.1.1 | 15 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2;lineage4.4.1.1 | 1 |
| lineage2.2;lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 129 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4037649 | Sensitive | lineage4.4.1.1 | None | SRR6896442 | Sensitive | lineage4.4.1.1 | None | ERR11466003 | Sensitive | lineage4.4.1.1 | None | SRR6896474 | Sensitive | lineage4.4.1.1 | None | ERR11465109 | RR-TB | lineage4.4.1.1 | None | SRR4037671 | Sensitive | lineage4.4.1.1 | None | SRR2101438 | Sensitive | lineage4.4.1.1 | None | SRR4037682 | Sensitive | lineage4.4.1.1 | za | SRR4037639 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037644 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | SRR4037751 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | SRR4037748 | Sensitive | lineage4.4.1.1 | za | SRR4037741 | Sensitive | lineage4.4.1.1 | za | SRR4037729 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037679 | Sensitive | lineage4.4.1.1 | za | SRR4037696 | Sensitive | lineage4.4.1.1 | za | SRR4037721 | Sensitive | lineage4.4.1.1 | za | SRR4037651 | Sensitive | lineage4.4.1.1 | za | ERR8774407 | RR-TB | lineage4.4.1.1 | None | SRR15368773 | Sensitive | lineage4.5 | None | ERR11465163 | Sensitive | lineage4.4.1.1 | None | ERR11465362 | Sensitive | lineage4.4.1.1 | None | SRR4037655 | Sensitive | lineage4.4.1.1 | za | SRR4037654 | Sensitive | lineage4.4.1.1 | za | SRR4037699 | Sensitive | lineage4.4.1.1 | za | SRR4037660 | Sensitive | lineage4.4.1.1 | za | SRR4037702 | Sensitive | lineage4.4.1.1 | za | SRR4037707 | Sensitive | lineage4.4.1.1 | za | SRR4037739 | Sensitive | lineage4.4.1.1 | za | SRR4037694 | Sensitive | lineage4.4.1.1 | za | SRR4037744 | Sensitive | lineage4.4.1.1 | za | SRR4037700 | Sensitive | lineage4.4.1.1 | None | SRR6982084 | Sensitive | lineage4.4.1.1 | None | SRR6981930 | Sensitive | lineage4.4.1.1 | None | SRR2101593 | Sensitive | lineage4.4.1.1 | None | SRR2101375 | Sensitive | lineage4.4.1.1 | None | ERR2200024 | Sensitive | lineage4.4.1.1 | sz | ERR552599 | MDR-TB | lineage4.4.1.1 | sz | ERR553282 | MDR-TB | lineage4.4.1.1 | sz | SRR29055598 | RR-TB | lineage4.4.1.1 | None | SRR4037701 | Sensitive | lineage4.4.1.1 | None | SRR6982091 | Sensitive | lineage4.4.1.1 | None | ERR2515909 | Sensitive | lineage4.4.1.1 | za | SRR4037745 | Sensitive | lineage4.4.1.1 | za | SRR4037691 | Sensitive | lineage4.4.1.1 | za | SRR4037762 | Sensitive | lineage4.4.1.1 | za | SRR4037677 | Sensitive | lineage4.4.1.1 | za | SRR4037730 | Sensitive | lineage4.4.1.1 | za | SRR4037650 | Sensitive | lineage4.4.1.1 | za | SRR4037667 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037652 | Sensitive | lineage4.4.1.1 | za | SRR4037692 | Sensitive | lineage4.4.1.1 | za | SRR4037656 | Sensitive | lineage4.4.1.1 | za | SRR4037714 | Sensitive | lineage4.4.1.1 | za | SRR4037735 | Sensitive | lineage4.4.1.1 | za | SRR4037755 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037761 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | ERR13260843 | Sensitive | lineage4.4.1.1 | None | ERR11466317 | RR-TB | lineage4.4.1.1 | None | SRR4037726 | Sensitive | lineage4.4.1.1 | None | ERR9121245 | Sensitive | lineage4.1.2.1 | None | SRR4037717 | Sensitive | lineage4.4.1.1 | None | SRR4037756 | Sensitive | lineage2.2.1;lineage4.4.1.1 | None | SRR4037646 | Sensitive | lineage4.4.1.1 | za | SRR4037662 | Sensitive | lineage4.4.1.1 | za | SRR4037713 | Sensitive | lineage4.4.1.1 | za | SRR4037715 | Sensitive | lineage4.4.1.1 | za | SRR4037747 | Sensitive | lineage4.4.1.1 | za | SRR4037736 | Sensitive | lineage4.4.1.1 | za | SRR4037683 | Sensitive | lineage4.4.1.1 | za | SRR4037725 | Sensitive | lineage4.4.1.1 | za | SRR4037759 | Sensitive | lineage4.4.1.1 | za | SRR4037740 | Sensitive | lineage4.4.1.1 | za | SRR4037637 | Sensitive | lineage4.4.1.1 | za | SRR4037643 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | SRR4037670 | Sensitive | lineage4.4.1.1 | za | SRR4037658 | Sensitive | lineage4.4.1.1 | za | SRR4037674 | Sensitive | lineage4.4.1.1 | za | SRR4037712 | Sensitive | lineage4.4.1.1 | za | SRR4037648 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037684 | Sensitive | lineage4.4.1.1 | za | SRR4037710 | Sensitive | lineage4.4.1.1 | za | SRR4037716 | Sensitive | lineage4.4.1.1 | za | SRR4037641 | Sensitive | lineage2;lineage4.4.1.1 | za | SRR4037754 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037659 | Sensitive | lineage4.4.1.1 | za | SRR4037722 | Sensitive | lineage4.4.1.1 | za | SRR4037760 | Sensitive | lineage4.4.1.1 | za | SRR4037733 | Sensitive | lineage4.4.1.1 | za | SRR4037676 | Sensitive | lineage4.4.1.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR4037705 | Sensitive | lineage4.4.1.1 | None | ERR552763 | MDR-TB | lineage4.4.1.1 | sz | ERR551242 | MDR-TB | lineage4.4.1.1 | sz | SRR4037665 | Sensitive | lineage2.2.1;lineage4.4.1.1 | None | ERR11465473 | RR-TB | lineage4.4.1.1 | None | SRR4037704 | Sensitive | lineage4.4.1.1 | za | SRR4037657 | Sensitive | lineage4.4.1.1 | za | SRR4037728 | Sensitive | lineage4.4.1.1 | za | SRR4037663 | Sensitive | lineage4.4.1.1 | za | SRR4037645 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | SRR4037732 | Sensitive | lineage4.4.1.1 | za | SRR4037680 | Sensitive | lineage4.4.1.1 | za | SRR4037695 | Sensitive | lineage4.4.1.1 | za | SRR4037746 | Sensitive | lineage4.4.1.1 | za | SRR4037638 | Sensitive | lineage4.4.1.1 | za | SRR4037752 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037689 | Sensitive | lineage4.4.1.1 | za | ERR4195715 | Sensitive | lineage4.1.2.1 | None | SRR4037640 | Sensitive | lineage4.4.1.1 | za | SRR4037666 | Sensitive | lineage2.2;lineage4.4.1.1 | za | SRR4037669 | Sensitive | lineage4.4.1.1 | za | SRR4037673 | Sensitive | lineage4.4.1.1 | za | SRR4037678 | Sensitive | lineage4.4.1.1 | za | SRR4037672 | Sensitive | lineage4.4.1.1 | za | SRR4037711 | Sensitive | lineage4.4.1.1 | za | SRR4037668 | Sensitive | lineage4.4.1.1 | za | SRR4037763 | Sensitive | lineage4.4.1.1 | za | SRR4037685 | Sensitive | lineage4.4.1.1 | za | SRR4037718 | Sensitive | lineage4.4.1.1 | za | SRR4037719 | Sensitive | lineage4.4.1.1 | za | SRR4037661 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | SRR4037724 | Sensitive | lineage4.4.1.1 | za | SRR4037723 | Sensitive | lineage4.4.1.1 | za | SRR4037734 | Sensitive | lineage4.4.1.1 | za | SRR4037737 | Sensitive | lineage4.4.1.1 | za | SRR4037727 | Sensitive | lineage4.4.1.1 | za | SRR4037738 | Sensitive | lineage4.4.1.1 | za | SRR4037750 | Sensitive | lineage4.4.1.1 | za |
|---|
