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SRA data
Rv1630
- c.1155C>T
Drug resistance types
6 Sensitive
0 RR-TB
2 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.8
4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
2
lineage3
1
La1.8.1
1
lineage4.3.3
1
Showing 1 to 5 of 5 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
9
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR2446337
Sensitive
lineage4.8
nl
ERR2517558
Sensitive
lineage4.8
nl
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693245
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR3275669
Sensitive
lineage4.8
nl
ERR3275805
Sensitive
lineage4.8
nl
SRR19303855
Sensitive
lineage4.3.3
None
SRR29231085
Sensitive
lineage3
None
SRR7236330
Other
La1.8.1
None
Showing 1 to 9 of 9 entries
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