Rv1630 - c.1313_1315delCCG
Drug resistance types
158 Sensitive
13 RR-TB
13 HR-TB
63 MDR-TB
34 Pre-XDR-TB
6 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 284 |
| lineage2.2 | 2 |
| lineage4.9;lineage2 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.3.4.2.1;lineage2.2.1 | 1 |
| lineage4.3.3 | 7 |
| lineage3 | 2 |
| La1.8.1 | 2 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 304 |
Geographic prevalence
Country level data for this variant is available for 100 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5152930 | MDR-TB | lineage2.2.1 | None | SRR5153094 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024906 | MDR-TB | lineage2.2.1 | cn | SRR2024999 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5217430 | Sensitive | lineage2.2.1 | None | SRR5217406 | Sensitive | lineage2.2.1 | None | SRR5217435 | HR-TB | lineage2.2.1 | None | SRR2024936 | MDR-TB | lineage2.2.1 | cn | SRR2024977 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5709862 | Pre-XDR-TB | lineage2.2.1 | th | SRR1723505 | MDR-TB | lineage2.2.1 | None | SRR15723119 | Sensitive | lineage2.2 | None | ERR4821995 | Other | lineage2.2.1 | gb | ERR4821362 | Sensitive | lineage2.2.1 | None | SRR5535694 | MDR-TB | lineage2.2.1 | None | SRR5709878 | MDR-TB | lineage2.2.1 | th | SRR5709776 | MDR-TB | lineage2.2.1 | th | SRR5709966 | MDR-TB | lineage2.2.1 | th | SRR5709992 | MDR-TB | lineage2.2.1 | th | SRR5709816 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709970 | MDR-TB | lineage2.2.1 | th | SRR5709830 | Sensitive | lineage2.2.1 | th | SRR5710000 | Sensitive | lineage2.2.1 | th | ERR279561 | Sensitive | lineage2.2.1 | None | SRR5817464 | MDR-TB | lineage2.2.1 | au | SRR5709859 | MDR-TB | lineage2.2.1 | th | ERR3276028 | Sensitive | lineage2.2.1 | nl | ERR4828701 | RR-TB | lineage2.2.1 | vn | ERR4830247 | Sensitive | lineage2.2.1 | vn | ERR4831357 | Sensitive | lineage2.2.1 | de | SRR6153074 | Sensitive | lineage2.2.1 | ca | SRR6153105 | Sensitive | lineage2.2.1 | ca | SRR6480570 | Sensitive | lineage2.2.1 | None | SRR6831802 | MDR-TB | lineage2.2.1 | None | ERR495092 | Sensitive | lineage2.2.1 | None | SRR6480360 | Sensitive | lineage2.2.1 | None | SRR6480553 | Sensitive | lineage2.2.1 | None | ERR501639 | Sensitive | lineage4.9;lineage2 | None | ERR4831803 | Sensitive | lineage2.2.1 | vn | ERR4831733 | Sensitive | lineage2.2.1 | vn | SRR6824411 | MDR-TB | lineage2.2.1 | cn | SRR6930896 | RR-TB | lineage2.2.1 | None | ERR3132179 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024939 | MDR-TB | lineage2.2.1 | cn | SRR6824671 | RR-TB | lineage4.4.2;lineage2.2.1 | cn | ERR3132175 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824581 | MDR-TB | lineage2.2.2;lineage2.2.1 | cn | SRR8237399 | HR-TB | lineage2.2.1 | us | SRR7517739 | MDR-TB | lineage2.2.1 | th | SRR8237395 | Sensitive | lineage2.2.1 | ch | SRR7517690 | XDR-TB | lineage2.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR7517820 | XDR-TB | lineage2.2.1 | None | DRR034432 | Sensitive | lineage2.2.1 | None | SRR2024881 | MDR-TB | lineage2.2.1 | cn | DRR034349 | Sensitive | lineage2.2.1 | None | DRR034417 | Sensitive | lineage2.2.1 | None | DRR034490 | Sensitive | lineage2.2.1 | None | DRR034454 | Other | lineage2.2.1 | None | DRR034508 | HR-TB | lineage2.2.1 | None | DRR034505 | Sensitive | lineage2.2.1 | None | DRR130076 | Pre-XDR-TB | lineage2.2.1 | None | DRR034515 | Sensitive | lineage2.2.1 | None | DRR130181 | Pre-XDR-TB | lineage2.2.1 | None | DRR130099 | Other | lineage2.2.1 | None | DRR130163 | Pre-XDR-TB | lineage2.2 | None | DRR130180 | Pre-XDR-TB | lineage2.2.1 | None | DRR188559 | Sensitive | lineage2.2.1 | None | DRR188469 | Sensitive | lineage2.2.1 | None | DRR188523 | Sensitive | lineage2.2.1 | None | DRR188533 | Other | lineage2.2.1 | None | DRR188600 | Sensitive | lineage2.2.1 | None | DRR188674 | Sensitive | lineage2.2.1 | None | DRR188684 | Sensitive | lineage2.2.1 | None | DRR188745 | Sensitive | lineage2.2.1 | None | DRR188707 | Sensitive | lineage2.2.1 | None | DRR188724 | Sensitive | lineage2.2.1 | None | DRR188733 | Sensitive | lineage2.2.1 | None | DRR188755 | Sensitive | lineage2.2.1 | None | DRR188779 | Sensitive | lineage2.2.1 | None | DRR188754 | Sensitive | lineage2.2.1 | None | DRR188838 | Sensitive | lineage2.2.1 | None | DRR188806 | Sensitive | lineage2.2.1 | None | DRR188897 | Sensitive | lineage2.2.1 | None | DRR188877 | Sensitive | lineage2.2.1 | None | DRR188937 | Sensitive | lineage2.2.1 | None | DRR188903 | Sensitive | lineage2.2.1 | None | DRR188934 | Sensitive | lineage2.2.1 | None | DRR188972 | Sensitive | lineage2.2.1 | None | DRR188952 | Sensitive | lineage2.2.1 | None | DRR189039 | Other | lineage2.2.1 | None | DRR189016 | Sensitive | lineage2.2.1 | None | DRR189037 | Sensitive | lineage2.2.1 | None | DRR346655 | Sensitive | lineage2.2.1 | None | DRR189061 | Sensitive | lineage2.2.1 | None | DRR346645 | Sensitive | lineage2.2.1 | None | DRR189040 | Sensitive | lineage2.2.1 | None | DRR189070 | Sensitive | lineage2.2.1 | None | DRR346641 | Sensitive | lineage2.2.1 | None | DRR346642 | Sensitive | lineage2.2.1 | None | ERR1452611 | Sensitive | lineage2.2.1 | None | ERR1034918 | Sensitive | lineage2.2.1 | za | ERR1452610 | Sensitive | lineage2.2.1 | None | ERR3273110 | MDR-TB | lineage2.2.1 | None | ERR3509858 | MDR-TB | lineage4.3.4.2.1;lineage2.2.1 | None | ERR4797228 | Pre-XDR-TB | lineage2.2.1 | in | ERR4010967 | Sensitive | lineage2.2.1 | None | ERR4797456 | Sensitive | lineage4.3.3 | in | ERR4800234 | Sensitive | lineage4.3.3 | in | ERR4811091 | Sensitive | lineage2.2.1 | cn | ERR4811038 | HR-TB | lineage2.2.1 | cn | ERR5864660 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864656 | MDR-TB | lineage2.2.1 | None | ERR5864657 | MDR-TB | lineage2.2.1 | None | ERR5864659 | MDR-TB | lineage2.2.1 | None | ERR5864658 | MDR-TB | lineage2.2.1 | None | ERR5865230 | MDR-TB | lineage2.2.1 | None | ERR5865229 | MDR-TB | lineage2.2.1 | None | ERR5865231 | MDR-TB | lineage2.2.1 | None | ERR5865284 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865281 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865282 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865280 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865283 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865689 | MDR-TB | lineage2.2.1 | None | ERR5865704 | MDR-TB | lineage2.2.1 | None | ERR5865690 | MDR-TB | lineage2.2.1 | None | ERR5866310 | MDR-TB | lineage2.2.1 | None | ERR5865703 | MDR-TB | lineage2.2.1 | None | ERR5866308 | MDR-TB | lineage2.2.1 | None | ERR5866309 | MDR-TB | lineage2.2.1 | None | ERR718199 | Sensitive | lineage2.2.1 | th | ERR5866323 | MDR-TB | lineage2.2.1 | None | ERR5866325 | MDR-TB | lineage2.2.1 | None | ERR718228 | Sensitive | lineage2.2.1 | th | ERR718230 | Sensitive | lineage2.2.1 | th | ERR5866324 | MDR-TB | lineage2.2.1 | None | ERR5987195 | Sensitive | lineage2.2.1 | None | ERR5987198 | Sensitive | lineage2.2.1 | None | ERR718213 | Sensitive | lineage2.2.1 | th | ERR718275 | Sensitive | lineage2.2.1 | th | ERR718246 | Sensitive | lineage2.2.1 | th | ERR718302 | Sensitive | lineage2.2.1 | th | ERR718508 | Sensitive | lineage2.2.1 | th | ERR718425 | Sensitive | lineage2.2.1 | th | ERR718385 | Sensitive | lineage2.2.1 | th | ERR718446 | Sensitive | lineage2.2.1 | th | ERR751661 | Sensitive | lineage2.2.1 | th | ERR751774 | Sensitive | lineage2.2.1 | th | ERR751648 | Sensitive | lineage2.2.1 | th | ERR751682 | Sensitive | lineage2.2.1 | th | ERR751995 | Sensitive | lineage2.2.1 | th | ERR751890 | Sensitive | lineage2.2.1 | th | ERR751814 | Sensitive | lineage2.2.1 | th | ERR751912 | Sensitive | lineage2.2.1 | th | ERR751941 | Sensitive | lineage2.2.1 | th | ERR751981 | Sensitive | lineage2.2.1 | th | ERR752029 | Sensitive | lineage2.2.1 | th | ERR752135 | Sensitive | lineage2.2.1 | th | ERR752080 | Sensitive | lineage2.2.1 | th | ERR752032 | Sensitive | lineage2.2.1 | th | ERR752073 | Sensitive | lineage2.2.1 | th | ERR752086 | Sensitive | lineage2.2.1 | th | ERR752143 | Sensitive | lineage2.2.1 | th | ERR752282 | Sensitive | lineage2.2.1 | th | ERR752148 | Sensitive | lineage2.2.1 | th | ERR752265 | Sensitive | lineage2.2.1 | th | ERR7737781 | RR-TB | lineage2.2.1 | None | ERR767969 | Sensitive | lineage2.2.1 | th | ERR767983 | Sensitive | lineage2.2.1 | th | ERR767978 | Sensitive | lineage2.2.1 | th | ERR768004 | Sensitive | lineage2.2.1 | th | ERR789239 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911389 | MDR-TB | lineage2.2.1 | us | ERR789238 | XDR-TB | lineage2.2.1 | None | ERR789235 | XDR-TB | lineage2.2.1 | None | ERR789236 | XDR-TB | lineage2.2.1 | None | ERR789237 | Pre-XDR-TB | lineage2.2.1 | None | ERR789234 | XDR-TB | lineage2.2.1 | None | ERR7912728 | MDR-TB | lineage2.2.1 | us | ERR8699784 | Sensitive | lineage2.2.1 | None | ERR9119942 | Sensitive | lineage2.2.1 | None | ERR8773609 | MDR-TB | lineage2.2.1 | None | ERR8773611 | MDR-TB | lineage2.2.1 | None | ERR8774572 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975857 | Sensitive | lineage2.2.1 | None | ERR8975963 | Sensitive | lineage2.2.1 | None | ERR8774376 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119352 | Sensitive | lineage2.2.1 | None | ERR9119943 | Sensitive | lineage2.2.1 | None | SRR10305626 | MDR-TB | lineage2.2.1 | None | SRR10397130 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305947 | HR-TB | lineage2.2.1 | None | SRR10809031 | Sensitive | lineage2.2.1 | None | SRR10397136 | Pre-XDR-TB | lineage2.2.1 | None | SRR12072595 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172974 | RR-TB | lineage2.2.1 | None | SRR1175072 | RR-TB | lineage2.2.1 | None | SRR11972170 | HR-TB | lineage3 | None | SRR11972294 | Sensitive | lineage3 | None | SRR10809169 | Sensitive | lineage2.2.1 | None | SRR1184394 | RR-TB | lineage2.2.1 | None | SRR1196702 | RR-TB | lineage2.2.1 | None | SRR13423634 | Other | lineage2.2.1 | None | SRR13180240 | MDR-TB | lineage2.2.1 | None | SRR13423637 | Other | lineage2.2.1 | None | SRR15315749 | HR-TB | lineage2.2.1 | None | SRR15315772 | Sensitive | lineage2.2.1 | None | SRR15316020 | HR-TB | lineage2.2.1 | None | SRR15315843 | HR-TB | lineage2.2.1 | None | SRR15316315 | HR-TB | lineage2.2.1 | None | SRR15316401 | HR-TB | lineage2.2.1 | None | SRR15316332 | Sensitive | lineage2.2.1 | None | SRR15368722 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368717 | Sensitive | lineage2.2.1 | None | SRR15368708 | Sensitive | lineage2.2.1 | None | SRR15723087 | Other | lineage2.2.1 | None | SRR15368719 | MDR-TB | lineage2.2.1 | None | SRR15368951 | Other | lineage2.2.1 | None | SRR15722961 | Sensitive | lineage2.2.1 | None | SRR15723023 | Sensitive | lineage2.2.1 | None | SRR15368786 | MDR-TB | lineage2.2.1 | None | SRR15723107 | Sensitive | lineage2.2.1 | None | SRR15723135 | Other | lineage2.2.1 | None | SRR1792372 | Other | La1.8.1 | None | SRR16088240 | MDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR16099300 | Sensitive | lineage4.3.3 | None | SRR1792356 | Other | La1.8.1 | None | SRR16103903 | Other | lineage2.2.1 | None | SRR1710080 | Sensitive | lineage2.2.1 | cn | SRR18715164 | MDR-TB | lineage2.2.1 | None | SRR18002911 | Sensitive | lineage4;lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18511639 | Sensitive | lineage2.2.1 | None | SRR18002893 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18897162 | Other | lineage2.2.1 | None | SRR18715376 | MDR-TB | lineage2.2.1 | None | SRR20969939 | Other | lineage2.2.1 | None | SRR21277108 | Sensitive | lineage2.2.1 | None | SRR20970017 | HR-TB | lineage2.2.1 | None | SRR21277138 | Sensitive | lineage2.2.1 | None | SRR21277280 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277568 | HR-TB | lineage2.2.1 | None | SRR21576607 | RR-TB | lineage2.2.1 | None | SRR21277575 | MDR-TB | lineage2.2.1 | None | SRR21277667 | Sensitive | lineage2.2.1 | None | SRR21277833 | Sensitive | lineage2.2.1 | None | SRR21291138 | Sensitive | lineage2.2.1 | None | SRR21277723 | Sensitive | lineage2.2.1 | None | SRR21277800 | Sensitive | lineage2.2.1 | None | SRR21279362 | Sensitive | lineage2.2.1 | None | SRR21291155 | Sensitive | lineage2.2.1 | None | SRR21576554 | RR-TB | lineage2.2.1 | None | SRR21747027 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576667 | MDR-TB | lineage2.2.1 | None | SRR21674622 | Sensitive | lineage2.2.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21709340 | Sensitive | lineage2.2.1 | None | SRR21709858 | Sensitive | lineage2.2.1 | None | SRR22424859 | Sensitive | lineage2.2.1 | None | SRR22424759 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424774 | MDR-TB | lineage4.3.3 | None | ERR11081045 | MDR-TB | lineage2.2.1 | None | ERR11069133 | MDR-TB | lineage2.2.1 | None | SRR24035842 | Sensitive | lineage2.2.1 | None | ERR11081990 | MDR-TB | lineage2.2.1 | None | ERR11082389 | MDR-TB | lineage2.2.1 | None | SRR24035843 | Sensitive | lineage2.2.1 | None | ERR11138646 | Pre-XDR-TB | lineage2.2.1 | None | SRR14519111 | Sensitive | lineage2.2.1 | None | SRR14519139 | Sensitive | lineage2.2.1 | None | ERR3986040 | Sensitive | lineage2.2.1 | None | SRR14519141 | Sensitive | lineage2.2.1 | None | ERR5758311 | Sensitive | lineage2.2.1 | None | ERR5758313 | Sensitive | lineage2.2.1 | None | ERR4813997 | Sensitive | lineage2.2.1 | br | SRR23691366 | Sensitive | lineage2.2.1 | None | SAMEA2533964 | MDR-TB | lineage2.2.1 | uz | ERR2041768 | MDR-TB | lineage2.2.1 | rs | SRR1723506 | RR-TB | lineage2.2.1 | None | SRR2024911 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024928 | MDR-TB | lineage2.2.1 | cn | SAMEA2533898 | MDR-TB | lineage2.2.1 | uz | ERR4816359 | Sensitive | lineage4.3.3 | gb | SRR2024926 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1633868 | Sensitive | lineage2.2.1 | za | SRR2024905 | Pre-XDR-TB | lineage2.2.1 | cn | SAMEA2533789 | Sensitive | lineage2.2.1 | th | ERR2229519 | Sensitive | lineage4.8 | None | SRR5065345 | Sensitive | lineage2.2.1 | vn | ERR2432985 | Sensitive | lineage2.2.1 | br | SRR5067325 | Other | lineage2.2.1 | vn | SAMN02586096 | RR-TB | lineage2.2.1 | za | ERR2503514 | Sensitive | lineage2.2.1 | fi | ERR4819079 | Sensitive | lineage4.3.3 | gb | SRR5074063 | Sensitive | lineage2.2.1 | vn | ERR4819014 | Sensitive | lineage4.3.3 | None | SRR2024895 | MDR-TB | lineage2.2.1 | cn | ERR2512468 | Sensitive | lineage2.2.1 | gb | SRR5073768 | Sensitive | lineage2.2.1 | vn | SRR2024884 | MDR-TB | lineage2.2.1 | cn | SRR5065312 | Sensitive | lineage2.2.1 | vn | SRR5067630 | Sensitive | lineage2.2.1 | vn |
|---|
