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SRA data
Rv1854c
- c.252A>C
Drug resistance types
20 Sensitive
1 RR-TB
12 HR-TB
4 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.2
16
lineage4.4.1.1
7
lineage3
4
lineage4.1.2.1
2
lineage4.3.3
2
lineage1.1.2;lineage2.2.1
2
lineage2.2.1
2
lineage4.3.2.1;lineage4.4.1.1
1
lineage4.2;lineage4.6.3;lineage4.9.1
1
lineage1.1.2;lineage2.2.1;lineage4
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
47
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10680039
RR-TB
lineage3
None
ERR10680101
MDR-TB
lineage3
None
ERR11067721
HR-TB
lineage4.2.1
None
ERR11252459
Other
lineage4.4.1.1
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR11488831
MDR-TB
lineage4.4.1.1
None
ERR11488850
MDR-TB
lineage4.4.1.1
None
ERR11811430
Other
lineage4.4.1.1
None
ERR11811472
Other
lineage4.4.1.1
None
ERR13261165
Sensitive
lineage1.1.2
None
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