Rv1854c - c.252A>C
Drug resistance types
20 Sensitive
1 RR-TB
12 HR-TB
4 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 16 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.4.1.1 | 7 |
| lineage3 | 4 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 1 |
| lineage4.3.2.1;lineage4.4.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.1.2;lineage2.2.1 | 2 |
| lineage2.2.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 47 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4797364 | Sensitive | lineage1.1.2 | in |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR29055375 | HR-TB | lineage4.1.2.1 | None |
| ERR4799199 | Sensitive | lineage1.1.2 | in |
| ERR13261165 | Sensitive | lineage1.1.2 | None |
| SRR19325521 | HR-TB | lineage1.1.2 | None |
| SRR29053569 | HR-TB | lineage1.1.2 | None |
| ERR11488831 | MDR-TB | lineage4.4.1.1 | None |
| ERR10680039 | RR-TB | lineage3 | None |
| ERR867557 | Sensitive | lineage1.1.2 | None |
| ERR4816139 | Sensitive | lineage1.1.2 | gb |
| ERR11811472 | Other | lineage4.4.1.1 | None |
| ERR4797050 | MDR-TB | lineage1.1.2 | in |
| SRR19224241 | HR-TB | lineage4.1.2.1 | None |
| ERR11252459 | Other | lineage4.4.1.1 | None |
| ERR11488850 | MDR-TB | lineage4.4.1.1 | None |
| SRR25827345 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None |
| ERR8975402 | Other | lineage4.3.2.1;lineage4.4.1.1 | None |
| ERR2660547 | Other | lineage4.4.1.1 | None |
| ERR867563 | Sensitive | lineage1.1.2 | None |
| ERR987713 | HR-TB | lineage4.2.2.2 | None |
| SRR25827768 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage4 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR10680101 | MDR-TB | lineage3 | None |
| ERR13290878 | HR-TB | lineage1.1.2;lineage2.2.1 | None |
| ERR4796709 | HR-TB | lineage1.1.2 | in |
| ERR4797029 | Sensitive | lineage1.1.2 | in |
| SRR29231540 | Sensitive | lineage1.1.2 | None |
| ERR4796638 | Sensitive | lineage1.1.2 | in |
| ERR752278 | Sensitive | lineage2.2.1 | th |
| ERR4811431 | Sensitive | lineage3 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| SRR7276698 | Sensitive | lineage4.3.3 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| ERR11067721 | HR-TB | lineage4.2.1 | None |
| ERR4811434 | Sensitive | lineage3 | None |
| SRR7276682 | Sensitive | lineage4.3.3 | None |
| ERR4800221 | HR-TB | lineage1.1.2;lineage2.2.1 | in |
| ERR4798614 | Other | lineage1.1.2 | in |
| ERR11811430 | Other | lineage4.4.1.1 | None |
| ERR13262065 | Sensitive | lineage1.2.2.2 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| ERR7821102 | Other | lineage4.4.1.1 | None |
| SRR14519137 | Sensitive | lineage4.4.2 | None |
| ERR752220 | Sensitive | lineage2.2.1 | th |
| ERR4797335 | Sensitive | lineage1.1.2 | in |
| ERR4796642 | Sensitive | lineage1.1.2 | in |
