lineage | Count |
---|---|
lineage2.2.2 | 18 |
lineage4.4.2 | 3 |
lineage2 | 1 |
lineage4.5 | 2 |
lineage2.2.1 | 27 |
lineage2.2.1;lineage2.2.2 | 5 |
lineage2.2;lineage4.9 | 2 |
lineage2;lineage4.9 | 2 |
lineage2.2.2;lineage4 | 6 |
lineage2.2.1.1 | 3 |
lineage4.9 | 3 |
lineage2.2.2;lineage4.9 | 1 |
lineage3 | 3 |
lineage2.2;lineage4 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage2.2.1.1;lineage4 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR1013568 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None |
SRR1049040 | HR-TB | lineage2 | None |
SRR1013607 | HR-TB | lineage2.2.2 | None |
SAMN02360585 | HR-TB | lineage4.5 | None |
SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1048998 | HR-TB | lineage2.2.1 | None |
SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None |
SRR1013603 | HR-TB | lineage2.2.1 | None |
SRR1048975 | HR-TB | lineage2.2.1 | None |
SRR1048974 | HR-TB | lineage2.2.1 | None |
SRR1047993 | HR-TB | lineage2.2.1 | None |
SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None |
SRR1048853 | HR-TB | lineage2;lineage4.9 | None |
SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None |
SRR1048966 | MDR-TB | lineage2.2.1 | None |
SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None |
SAMN02360579 | HR-TB | lineage2.2.1.1 | None |
SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None |
SRR1048987 | HR-TB | lineage2.2.1 | None |
SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None |
SRR1049007 | HR-TB | lineage2.2.2 | None |
SRR1048965 | HR-TB | lineage2.2.1 | None |
SRR1013604 | HR-TB | lineage2.2.1 | None |
SRR1013602 | HR-TB | lineage2.2.1 | None |
SRR1013590 | HR-TB | lineage2.2.1 | None |
SRR1048991 | HR-TB | lineage2;lineage4.9 | None |
SRR1013601 | HR-TB | lineage2.2.1 | None |
SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048993 | HR-TB | lineage4.9 | None |
SRR1048994 | HR-TB | lineage4.9 | None |
SRR1048995 | HR-TB | lineage4.5 | None |
SRR1013553 | MDR-TB | lineage2.2.2 | None |
SRR1048983 | HR-TB | lineage2.2.1.1 | None |
SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None |
SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None |
SRR1048986 | HR-TB | lineage2.2.1 | None |
SRR1013578 | HR-TB | lineage2.2.2;lineage4 | None |
SRR1048988 | HR-TB | lineage2.2.1 | None |
SRR1049027 | HR-TB | lineage2.2.2;lineage4.9 | None |
SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None |
SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None |
SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1049023 | HR-TB | lineage4.9 | None |
SRR1048981 | HR-TB | lineage3 | None |
SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1144809 | HR-TB | lineage2.2.1 | None |
SRR1048980 | HR-TB | lineage3 | None |
SRR1048997 | HR-TB | lineage2.2.1 | None |
SAMN02360577 | HR-TB | lineage3 | None |
SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1013589 | HR-TB | lineage2.2.1 | None |
SAMN02360586 | HR-TB | lineage2.2.1 | None |
SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None |
SRR1047996 | MDR-TB | lineage2.2.2 | None |
SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048885 | HR-TB | lineage2.2;lineage4 | None |
SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None |
SRR1048982 | HR-TB | lineage2.2.1.1 | None |
SAMN02360574 | HR-TB | lineage2.2.1 | None |
SRR1013584 | HR-TB | lineage2.2.2 | None |
SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None |
SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048852 | HR-TB | lineage2.2;lineage4.9 | None |
SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None |
SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1144759 | HR-TB | lineage2.2.2;lineage4 | None |
SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None |
SAMN02360583 | HR-TB | lineage2.2.2 | None |
SRR1048985 | HR-TB | lineage2.2.1 | None |
SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1144744 | HR-TB | lineage2.2.1 | None |
SRR1013577 | HR-TB | lineage2.2.2 | None |
SAMN02360580 | HR-TB | lineage2.2.1 | None |
SAMN02360581 | HR-TB | lineage2.2.1 | None |
SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None |