Rv1908c - c.408C>T
Drug resistance types
0 Sensitive
0 RR-TB
55 HR-TB
6 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 26 |
| lineage4.4.2 | 3 |
| lineage4.5 | 2 |
| lineage2.2.1;lineage2.2.2 | 5 |
| lineage2 | 1 |
| lineage2.2.2 | 21 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2;lineage4 | 5 |
| lineage3 | 3 |
| lineage4.9 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 2 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage2;lineage4.9 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048995 | HR-TB | lineage4.5 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1049040 | HR-TB | lineage2 | None | SRR1013607 | HR-TB | lineage2.2.2 | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2.2 | None | SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048981 | HR-TB | lineage3 | None | SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1048965 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1048852 | HR-TB | lineage2.2;lineage4.9 | None | SRR1048988 | HR-TB | lineage2.2.1 | None | SRR1049027 | HR-TB | lineage2.2.2;lineage4.9 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1049004 | HR-TB | lineage2.2.2 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR1048991 | HR-TB | lineage2;lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1013553 | MDR-TB | lineage2.2.2 | None | SRR1048983 | HR-TB | lineage2.2.1.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048885 | HR-TB | lineage2.2;lineage4 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1013578 | HR-TB | lineage2.2.2;lineage4 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None | SRR1048853 | HR-TB | lineage2;lineage4.9 | None | SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None | SRR1049023 | HR-TB | lineage4.9 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | SRR1013601 | HR-TB | lineage2.2.1 | None |
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