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SRA data
Rv1908c
- c.439C>T
Drug resistance types
3 Sensitive
0 RR-TB
4 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9;lineage7
2
lineage4.9
2
lineage2.2.1
2
lineage2.2.1.1
1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
lineage4.2;lineage4.8.1;lineage4.9
1
lineage2.1;lineage4.9;lineage7
1
lineage4.2;lineage4.9
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
12
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3283042
Other
lineage4.9
None
ERR3797043
Sensitive
lineage4.9
None
ERR5311091
Other
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
None
SRR24083729
Sensitive
lineage2.2.1.1
None
SRR30180436
Pre-XDR-TB
lineage2.2.1
None
SRR3675231
MDR-TB
lineage4.9;lineage7
None
SRR3675539
HR-TB
lineage4.9;lineage7
None
SRR3675555
HR-TB
lineage2.1;lineage4.9;lineage7
None
SRR5067231
Sensitive
lineage2.2.1
vn
SRR6045785
MDR-TB
lineage4.2;lineage4.8.1;lineage4.9
None
Showing 1 to 10 of 12 entries
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