TB-Profiler
Home
Upload
SRA data
Rv1918c
- c.545_605delCCGCGGCCGTGGTGACCGCGCTCACCACGGCCGTGGGCATGCCGACTTTTGCCGGCCGGGC
Drug resistance types
21 Sensitive
0 RR-TB
3 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.3.2
21
lineage4.6.5
7
lineage2.2.1
1
lineage4.4.2
1
lineage2.2.2
1
Showing 1 to 5 of 5 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
31
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1193795
HR-TB
lineage4.3.2
de
ERR1679638
Pre-XDR-TB
lineage4.6.5
ng
ERR2514219
Other
lineage4.6.5
gb
ERR2516117
Sensitive
lineage4.3.2
es
ERR2516117
Sensitive
lineage4.3.2
es
ERR2516269
Other
lineage4.6.5
be
ERR4195346
Sensitive
lineage4.3.2
None
ERR4195402
Sensitive
lineage4.3.2
None
ERR4195408
Sensitive
lineage4.3.2
None
ERR4195470
Sensitive
lineage4.3.2
None
Showing 1 to 10 of 31 entries
Previous
1
2
3
4
Next