Rv1918c - p.Thr533Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
24 HR-TB
139 MDR-TB
64 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 223 |
| lineage2.2.1;lineage4.1.2.1 | 5 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 232 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR552603 | MDR-TB | lineage2.2.1 | None | ERR5865396 | MDR-TB | lineage2.2.1 | None | ERR5864512 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285829 | MDR-TB | lineage2.2.1 | None | ERR551644 | MDR-TB | lineage2.2.1 | None | SRR10380142 | MDR-TB | lineage2.2.1 | None | ERR10762494 | Pre-XDR-TB | lineage2.2.1 | None | SRR10147694 | MDR-TB | lineage2.2.1 | None | ERR552400_ERR552401 | MDR-TB | lineage2.2.1 | None | ERR11082199 | MDR-TB | lineage2.2.1 | None | ERR5865643 | MDR-TB | lineage2.2.1 | None | ERR5864557 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865394 | MDR-TB | lineage2.2.1 | None | ERR403264 | HR-TB | lineage2.2.1 | None | SRR28498446 | XDR-TB | lineage2.2.1 | None | ERR5864510 | MDR-TB | lineage2.2.1 | None | ERR5864516 | MDR-TB | lineage2.2.1 | None | SRR28498451 | XDR-TB | lineage2.2.1 | None | ERR1023366 | HR-TB | lineage2.2.1 | None | ERR5864517 | MDR-TB | lineage2.2.1 | None | SRR1159154 | Pre-XDR-TB | lineage2.2.1 | None | ERR552401 | MDR-TB | lineage2.2.1 | None | ERR5865941 | MDR-TB | lineage2.2.1 | None | SRR13232574 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2533570 | MDR-TB | lineage2.2.1 | uz | SAMEA2534605 | MDR-TB | lineage2.2.1 | uz | SAMEA2534624 | MDR-TB | lineage2.2.1 | uz | SAMEA2534761 | MDR-TB | lineage2.2.1 | uz | SRR1168979 | Pre-XDR-TB | lineage2.2.1 | None | SRR6256998 | RR-TB | lineage2.2.1 | None | SAMN02419608 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419621 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419639 | Pre-XDR-TB | lineage2.2.1 | by | ERR158615 | HR-TB | lineage2.2.1 | ru | SRR14782638 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None | ERR228066 | HR-TB | lineage2.2.1 | ru | ERR551082 | HR-TB | lineage2.2.1 | None | ERR5866493 | XDR-TB | lineage2.2.1 | None | ERR13284470 | MDR-TB | lineage2.2.1 | None | ERR551060 | HR-TB | lineage2.2.1 | None | SRR10303283 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865492 | MDR-TB | lineage2.2.1 | None | SRR7516442 | Pre-XDR-TB | lineage2.2.1 | None | ERR550749_ERR550748 | MDR-TB | lineage2.2.1 | None | ERR11082162 | MDR-TB | lineage2.2.1 | None | ERR5865047 | MDR-TB | lineage2.2.1 | None | ERR550748 | MDR-TB | lineage2.2.1 | None | ERR551081 | HR-TB | lineage2.2.1 | None | SRR10380143 | MDR-TB | lineage2.2.1 | None | SRR1162995 | Pre-XDR-TB | lineage2.2.1 | None | SRR6357004 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163199 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864519 | MDR-TB | lineage2.2.1 | None | ERR552604 | MDR-TB | lineage2.2.1 | None | ERR027454 | HR-TB | lineage2.2.1 | ru | ERR7975667 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938657 | HR-TB | lineage2.2.1 | None | ERR11082786 | MDR-TB | lineage2.2.1 | None | ERR552910 | HR-TB | lineage2.2.1 | None | ERR5865936 | MDR-TB | lineage2.2.1 | None | ERR5866118 | Pre-XDR-TB | lineage2.2.1 | None | ERR550928 | MDR-TB | lineage2.2.1 | None | SRR1163317 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | SRR24710279 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762372 | MDR-TB | lineage2.2.1 | None | ERR1559742 | MDR-TB | lineage2.2.1 | None | ERR13284420 | MDR-TB | lineage2.2.1 | None | ERR5865454 | MDR-TB | lineage2.2.1 | None | ERR11081016 | MDR-TB | lineage2.2.1 | None | ERR5865395 | MDR-TB | lineage2.2.1 | None | ERR5866117 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864508 | MDR-TB | lineage2.2.1 | None | ERR5865049 | MDR-TB | lineage2.2.1 | None | ERR5865318 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153328 | Pre-XDR-TB | lineage2.2.1 | None | ERR13106394 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864518 | MDR-TB | lineage2.2.1 | None | SRR24256134 | MDR-TB | lineage2.2.1 | None | ERR5865452 | MDR-TB | lineage2.2.1 | None | SRR16088436 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239558 | MDR-TB | lineage2.2.1 | None | ERR550929 | Pre-XDR-TB | lineage2.2.1 | None | ERR552400 | MDR-TB | lineage2.2.1 | None | ERR13285802 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865046 | MDR-TB | lineage2.2.1 | None | ERR13284496 | MDR-TB | lineage2.2.1 | None | SRR24710149 | HR-TB | lineage2.2.1 | None | SRR10397199 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864551 | MDR-TB | lineage2.2.1 | None | SRR15901698 | MDR-TB | lineage2.2.1 | None | ERR5865321 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864555 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311026 | MDR-TB | lineage2.2.1 | None | ERR552931 | MDR-TB | lineage2.2.1 | None | ERR11068582 | HR-TB | lineage2.2.1 | None | SRR1159053 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715038 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498672 | MDR-TB | lineage2.2.1 | None | ERR8665949 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831246 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831330 | Pre-XDR-TB | lineage2.2.1 | de | ERR7911752 | MDR-TB | lineage2.2.1 | us | SRR16088214 | MDR-TB | lineage2.2.1 | None | ERR7911041 | Pre-XDR-TB | lineage2.2.1 | md | ERR7910921 | MDR-TB | lineage2.2.1 | md | ERR4830770 | MDR-TB | lineage2.2.1 | ir | ERR8665603 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665928 | MDR-TB | lineage2.2.1 | None | ERR8665947 | Pre-XDR-TB | lineage2.2.1 | None | ERR144573 | MDR-TB | lineage2.2.1 | ru | ERR108494 | MDR-TB | lineage2.2.1 | ru | ERR2517087 | MDR-TB | lineage2.2.1 | gb | ERR2516977 | MDR-TB | lineage2.2.1 | gb | ERR2516895 | MDR-TB | lineage2.2.1 | gb | ERR551659 | MDR-TB | lineage2.2.1 | None | ERR1559743 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284869 | MDR-TB | lineage2.2.1 | None | ERR551059 | HR-TB | lineage2.2.1 | None | ERR5864511 | MDR-TB | lineage2.2.1 | None | ERR5866426 | MDR-TB | lineage2.2.1 | None | SRR23861895 | Pre-XDR-TB | lineage2.2.1 | None | ERR552931_ERR552932 | MDR-TB | lineage2.2.1 | None | SRR1169109 | Pre-XDR-TB | lineage2.2.1 | None | ERR552772_ERR552771 | MDR-TB | lineage2.2.1 | None | SRR10380050 | MDR-TB | lineage2.2.1 | None | ERR550749 | MDR-TB | lineage2.2.1 | None | ERR552772 | MDR-TB | lineage2.2.1 | None | ERR551660 | MDR-TB | lineage2.2.1 | None | SRR13232588 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782546 | HR-TB | lineage2.2.1 | None | ERR11043091 | MDR-TB | lineage2.2.1 | None | SRR28351227 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR552374_ERR552373 | MDR-TB | lineage2.2.1 | None | ERR552771 | MDR-TB | lineage2.2.1 | None | ERR5865320 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866427 | MDR-TB | lineage2.2.1 | None | ERR550928_ERR550929 | MDR-TB | lineage2.2.1 | None | ERR552932 | MDR-TB | lineage2.2.1 | None | ERR13292580 | MDR-TB | lineage2.2.1 | None | ERR5864514 | MDR-TB | lineage2.2.1 | None | SRR1169091 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR13284862 | MDR-TB | lineage2.2.1 | None | ERR5864552 | MDR-TB | lineage2.2.1 | None | ERR4872348 | MDR-TB | lineage2.2.1 | None | ERR8665754 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163376 | Pre-XDR-TB | lineage2.2.1 | None | ERR403308 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1174829 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166151 | MDR-TB | lineage2.2.1 | None | ERR551645_ERR551644 | MDR-TB | lineage2.2.1 | None | ERR11080852 | MDR-TB | lineage2.2.1 | None | SRR6257053 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169005 | MDR-TB | lineage2.2.1 | None | SRR1172320 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232440 | HR-TB | lineage2.2.1 | None | SRR6256969 | MDR-TB | lineage2.2.1 | None | SRR21798485 | HR-TB | lineage2.2.1 | None | ERR4829933 | MDR-TB | lineage2.2.1 | pk | ERR5864513 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485120 | MDR-TB | lineage2.2.1 | None | SRR10379940 | MDR-TB | lineage2.2.1 | None | ERR13284413 | MDR-TB | lineage2.2.1 | None | SRR10430360 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172093 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SAMN02584609 | MDR-TB | lineage2.2.1 | md | ERR5865493 | MDR-TB | lineage2.2.1 | None | ERR5865393 | MDR-TB | lineage2.2.1 | None | ERR11798527 | MDR-TB | lineage2.2.1 | None | ERR8774579 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351224 | MDR-TB | lineage2.2.1;lineage4.3.4.1 | None | ERR8774576 | MDR-TB | lineage2.2.1 | None | ERR4822624 | HR-TB | lineage2.2.1 | None | ERR12916925 | XDR-TB | lineage2.2.1 | None | ERR5865451 | MDR-TB | lineage2.2.1 | None | ERR8665929 | MDR-TB | lineage2.2.1 | None | ERR8665946 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911418 | MDR-TB | lineage2.2.1 | us | ERR8665873 | MDR-TB | lineage2.2.1 | None | ERR5864515 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864553 | MDR-TB | lineage2.2.1 | None | ERR11083135 | MDR-TB | lineage2.2.1 | None | SAMEA2533443 | MDR-TB | lineage2.2.1 | uz | SAMEA2534087 | MDR-TB | lineage2.2.1 | uz | SAMEA2534098 | MDR-TB | lineage2.2.1 | uz | SAMEA2534893 | MDR-TB | lineage2.2.1 | uz | SAMEA2535008 | MDR-TB | lineage2.2.1 | uz | ERR2513783 | HR-TB | lineage2.2.1 | gb | ERR229999 | HR-TB | lineage2.2.1 | ru | SAMEA2534993 | HR-TB | lineage2.2.1 | tm | SRR24673509 | MDR-TB | lineage2.2.1 | None | ERR11080861 | MDR-TB | lineage2.2.1 | None | ERR11081843 | MDR-TB | lineage2.2.1 | None | SRR1174838 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180309 | Pre-XDR-TB | lineage2.2.1 | None | SRR24673510 | MDR-TB | lineage2.2.1 | None | SRR28351223 | MDR-TB | lineage2.2.1;lineage4 | None | SAMN02419556 | Pre-XDR-TB | lineage2.2.1 | by | ERR5865048 | MDR-TB | lineage2.2.1 | None | SRR14801845 | HR-TB | lineage2.2.1 | None | ERR551645 | MDR-TB | lineage2.2.1 | None | SRR5153218 | MDR-TB | lineage2.2.1 | None | ERR5864509 | MDR-TB | lineage2.2.1 | None | ERR11080969 | MDR-TB | lineage2.2.1 | None | SRR1163414 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163446 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR5865642 | MDR-TB | lineage2.2.1 | None | ERR552374 | MDR-TB | lineage2.2.1 | None | ERR552911 | HR-TB | lineage2.2.1 | None | ERR11081168 | MDR-TB | lineage2.2.1 | None | ERR551659_ERR551660 | MDR-TB | lineage2.2.1 | None | ERR4872356 | MDR-TB | lineage2.2.1 | None | SRR1169009 | Pre-XDR-TB | lineage2.2.1 | None | ERR552603_ERR552604 | MDR-TB | lineage2.2.1 | None | ERR5864554 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356955 | MDR-TB | lineage2.2.1 | None | ERR8665755 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163036 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR29681328 | HR-TB | lineage2.2.1 | None | ERR13276350 | MDR-TB | lineage2.2.1 | None | SRR29274764 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088553 | MDR-TB | lineage2.2.1 | None | ERR11082479 | MDR-TB | lineage2.2.1 | None | ERR5865392 | MDR-TB | lineage2.2.1 | None | ERR552373 | MDR-TB | lineage2.2.1 | None | ERR11068470 | MDR-TB | lineage2.2.1 | None | ERR5865453 | MDR-TB | lineage2.2.1 | None | SRR23310817 | MDR-TB | lineage2.2.1 | None | ERR13284486 | MDR-TB | lineage2.2.1 | None | SRR1163166 | Pre-XDR-TB | lineage2.2.1 | None |
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