ERR551082
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5865048
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866493
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13284470
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864511
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866426
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR144573
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR551645
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665949
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1169109
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11082162
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380143
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552772
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2513783
|
HR-TB
|
lineage2.2.1
|
gb
|
ERR551660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665947
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1169009
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14782546
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11043091
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552603_ERR552604
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865936
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMEA2534761
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR550928_ERR550929
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163036
|
MDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR5865454
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29274764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13292580
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16088553
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866117
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4872348
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865318
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665754
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR552373
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16088436
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR550929
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR552400
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02419639
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
SRR1174829
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24710149
|
HR-TB
|
lineage2.2.1
|
None
|
ERR552603
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02584609
|
MDR-TB
|
lineage2.2.1
|
md
|
SRR1166151
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864512
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMEA2534893
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR15901698
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911041
|
Pre-XDR-TB
|
lineage2.2.1
|
md
|
ERR5865321
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864555
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10147694
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6485120
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10430360
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068582
|
HR-TB
|
lineage2.2.1
|
None
|
SRR18715038
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMEA2534087
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR28498446
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR12916925
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR5865451
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228066
|
HR-TB
|
lineage2.2.1
|
ru
|
SAMEA2534993
|
HR-TB
|
lineage2.2.1
|
tm
|
SAMN02419608
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
ERR5864515
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864553
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1168979
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11080861
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081843
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284869
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551059
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6256998
|
RR-TB
|
lineage2.2.1
|
None
|
SRR24673510
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665873
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMEA2533570
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534605
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR14801845
|
HR-TB
|
lineage2.2.1
|
None
|
ERR8665929
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10303283
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865492
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5153218
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23861895
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR552931_ERR552932
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831246
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR550749_ERR550748
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829933
|
MDR-TB
|
lineage2.2.1
|
pk
|
ERR551081
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5864509
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552604
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2517087
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR552772_ERR552771
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380050
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR027454
|
HR-TB
|
lineage2.2.1
|
ru
|
ERR7975667
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163446
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR13284413
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865642
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665946
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR552374
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516895
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR4831330
|
Pre-XDR-TB
|
lineage2.2.1
|
de
|
ERR11082786
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4872356
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351227
|
MDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
ERR5864554
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864556
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR229999
|
HR-TB
|
lineage2.2.1
|
ru
|
ERR550928
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163317
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665755
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865320
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMEA2534098
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR10762372
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081016
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864514
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865395
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864508
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865049
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5153328
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7911418
|
MDR-TB
|
lineage2.2.1
|
us
|
SRR1163376
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR403308
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR5865452
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02419556
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
ERR5865453
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665928
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163166
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865396
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551645_ERR551644
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10397199
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6257053
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232440
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6256969
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910921
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR551644
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864557
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1172093
|
MDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR5865394
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865393
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351224
|
MDR-TB
|
lineage2.2.1;lineage4.3.4.1
|
None
|
ERR8774576
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864510
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864516
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28498451
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR29681328
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5864517
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1159154
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10762291
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232574
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4822624
|
HR-TB
|
lineage2.2.1
|
None
|
ERR551659
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1559743
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28351223
|
MDR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR14782638
|
HR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR10869423
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR551060
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7516442
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865047
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550748
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108494
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11080969
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1162995
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6357004
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163199
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864519
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163414
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMEA2535008
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR550749
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23938657
|
HR-TB
|
lineage2.2.1
|
None
|
ERR552911
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11081168
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551659_ERR551660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552910
|
HR-TB
|
lineage2.2.1
|
None
|
SRR13232588
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR552374_ERR552373
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866118
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR552771
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866427
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710279
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1559742
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28239558
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552932
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1169091
|
MDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR13284486
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864552
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516977
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR24256134
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830770
|
MDR-TB
|
lineage2.2.1
|
ir
|
ERR5865046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23310817
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1023366
|
HR-TB
|
lineage2.2.1
|
None
|
ERR158615
|
HR-TB
|
lineage2.2.1
|
ru
|
SAMEA2534624
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR11080852
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864551
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1169005
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1172320
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21798485
|
HR-TB
|
lineage2.2.1
|
None
|
ERR8665603
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13276350
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864513
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380142
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762494
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7911752
|
MDR-TB
|
lineage2.2.1
|
us
|
ERR552400_ERR552401
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23311026
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865643
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMEA2533443
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR403264
|
HR-TB
|
lineage2.2.1
|
None
|
ERR552931
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774579
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1159053
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28498672
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16088214
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552401
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865941
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11083135
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24673509
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02419621
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
SRR1174838
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13180309
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|