lineage | Count |
---|---|
lineage4.2.1 | 3 |
lineage2.2.1 | 11 |
lineage4.3.3 | 7 |
lineage4.4.1.1 | 3 |
lineage4.1.2.1 | 6 |
lineage4.3.2 | 2 |
lineage4.7 | 1 |
lineage3 | 22 |
lineage4.6.2.2 | 2 |
lineage4.1.1 | 3 |
lineage2.2.1.1 | 1 |
lineage4.5 | 1 |
La1.7.1 | 2 |
lineage1.1.3 | 1 |
lineage4.8 | 88 |
lineage4 | 12 |
4 | |
lineage4.9 | 2 |
lineage3.1.1 | 4 |
lineage4.1.2 | 1 |
lineage4.3.1 | 2 |
lineage1.1.2 | 1 |
lineage6 | 1 |
lineage1.1.1.1 | 1 |
lineage5.1.3 | 1 |
lineage4.2 | 1 |
lineage4.1.1.2 | 1 |
lineage3.1.2 | 1 |
lineage4.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 186 |
ID | Drug resistance | Lineage | Country iso2 | SRR6256976 | Pre-XDR-TB | lineage4.2.1 | ru | SRR6257068 | Sensitive | lineage2.2.1 | None | SRR6785342 | Sensitive | lineage2.2.1 | None | SRR6785206 | Sensitive | lineage2.2.1 | None | SRR6257066 | MDR-TB | lineage4.3.3 | None | SRR6785205 | Sensitive | lineage4.3.3 | None | ERR1194811 | Other | lineage2.2.1 | None | ERR1193709 | Sensitive | lineage4.3.3 | ao | SRR8420473 | Sensitive | lineage4.4.1.1 | None | SRR998857 | Pre-XDR-TB | lineage4.2.1 | None | ERR3799545 | HR-TB | lineage4.1.2.1 | None | ERR4195583 | Sensitive | lineage4.3.2 | None | ERR7911364 | MDR-TB | lineage4.3.3 | None | ERR4407493 | Sensitive | lineage4.1.2.1 | None | SRR1002695 | Sensitive | lineage2.2.1 | None | ERR9121652 | Sensitive | lineage4.3.2 | None | ERR9786342 | Sensitive | lineage4.3.3 | None | ERR9892005 | HR-TB | lineage4.7 | None | ERR9892286 | Sensitive | lineage4.1.2.1 | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | ERR9117733 | Sensitive | lineage3 | None | ERR9285887 | Sensitive | lineage4.4.1.1 | None | ERR9786343 | HR-TB | lineage4.1.2.1 | None | ERR9786623 | Sensitive | lineage4.6.2.2 | None | ERR9891976 | Sensitive | lineage4.1.2.1 | None | SRR11972162 | HR-TB | lineage4.1.1 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SRR11972168 | Sensitive | lineage3 | None | SRR11972215 | RR-TB | lineage4.5 | None | SRR13986566 | Other | La1.7.1 | None | SRR11972253 | MDR-TB | lineage1.1.3 | None | SRR11972267 | Sensitive | lineage2.2.1 | None | SRR11972331 | HR-TB | lineage2.2.1 | None | SRR14088362 | Sensitive | lineage3 | None | SRR14088394 | MDR-TB | lineage3 | None | SRR14088369 | Pre-XDR-TB | lineage3 | None | ERR2229536 | Sensitive | lineage4.8 | None | SRR18909922 | MDR-TB | lineage4.1.1 | None | ERR2229577 | Sensitive | lineage4.8 | None | SRR18213691 | Other | lineage4.8 | None | SRR18391712 | Other | La1.7.1 | None | ERR1949958 | Sensitive | lineage4.8 | dk | ERR2229546 | Other | lineage4.8 | None | ERR4817316 | Sensitive | lineage4.1.2.1 | gb | ERR2229544 | Sensitive | lineage4.8 | None | ERR2228962 | Sensitive | lineage4.8 | dk | ERR2229002 | Sensitive | lineage4 | None | ERR2229005 | Sensitive | lineage4.8 | None | ERR1949981 | Sensitive | lineage4.8 | dk | ERR2229548 | Sensitive | lineage4.8 | None | ERR2229028 | Sensitive | lineage4.8 | None | ERR2229038 | Sensitive | lineage4.8 | None | ERR2229016 | Sensitive | lineage4.8 | None | ERR2229551 | Sensitive | lineage4.8 | None | ERR2229040 | Sensitive | lineage4 | None | ERR2229046 | Sensitive | lineage4.8 | dk | ERR2229555 | HR-TB | lineage4.8 | None | ERR2229027 | Sensitive | lineage4.8 | None | ERR2229063 | Sensitive | lineage4.8 | dk | ERR2229078 | Sensitive | lineage4.8 | None | ERR2229566 | RR-TB | lineage4.8 | None | ERR2229132 | RR-TB | lineage4.8 | None | ERR2229082 | Sensitive | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR2229103 | Sensitive | lineage4.8 | None | ERR4817011 | Other | lineage3 | None | ERR2229098 | Sensitive | lineage4.8 | None | ERR2229087 | Sensitive | lineage4.8 | dk | ERR4816225 | Sensitive | lineage3 | None | ERR2229137 | Sensitive | lineage4.8 | None | ERR4816347 | Sensitive | lineage3 | gb | ERR2229142 | HR-TB | lineage4.8 | None | ERR2229153 | Sensitive | lineage4.8 | None | ERR2229158 | Sensitive | lineage4 | None | ERR2229588 | Sensitive | lineage4.8 | None | ERR2229168 | Other | lineage4 | None | ERR4817076 | Sensitive | lineage3 | None | ERR2229157 | Sensitive | lineage4.8 | None | ERR4816437 | Other | lineage3 | gb | ERR2229165 | Sensitive | lineage4 | None | ERR2229599 | Sensitive | lineage4.8 | None | ERR2229177 | Sensitive | lineage4 | None | ERR2229175 | Other | lineage4.8 | None | ERR2229766 | Sensitive | lineage4.8 | None | ERR2229188 | Sensitive | lineage4.8 | None | ERR2229190 | Sensitive | lineage4.8 | None | ERR2229194 | Sensitive | lineage4.8 | dk | ERR2229248 | Sensitive | lineage4.8 | None | ERR2229598 | Sensitive | lineage4.8 | dk | ERR2229228 | HR-TB | lineage4.8 | None | ERR2229622 | Sensitive | lineage4.8 | dk | ERR2229257 | Sensitive | lineage4.8 | None | ERR2229630 | Sensitive | lineage4.8 | None | ERR2229289 | Sensitive | lineage4.8 | None | ERR2229249 | Sensitive | lineage4.8 | dk | ERR2229631 | Sensitive | lineage4.8 | None | ERR2229296 | Sensitive | lineage4.8 | None | ERR2229641 | Sensitive | lineage4.8 | None | ERR2229294 | Other | lineage4.8 | None | ERR2229293 | Sensitive | lineage4.8 | None | ERR2229331 | Sensitive | lineage4.8 | dk | ERR2229309 | Sensitive | lineage4.8 | None | ERR2229295 | Sensitive | lineage4.8 | dk | ERR4816597 | Sensitive | None | ERR2229324 | Other | lineage4.8 | None | ERR2229658 | Sensitive | lineage4.8 | None | ERR2229340 | Sensitive | lineage4.8 | None | ERR2229352 | Sensitive | lineage4.8 | dk | ERR2229371 | Sensitive | lineage4.8 | None | ERR4816690 | Other | None | ERR2229361 | HR-TB | lineage4.8 | None | ERR2229374 | Sensitive | lineage4.8 | None | ERR2229381 | Sensitive | lineage4.8 | None | ERR2229377 | Other | lineage4.8 | None | ERR2229685 | Other | lineage4.8 | None | ERR2229401 | Sensitive | lineage4.8 | None | ERR2229380 | Sensitive | lineage4.8 | None | ERR2229388 | Sensitive | lineage4 | None | ERR2229391 | Other | lineage4.8 | None | ERR2229389 | RR-TB | lineage4 | None | ERR2229802 | Sensitive | lineage4.8 | None | ERR2229413 | RR-TB | lineage4 | None | ERR2229425 | Sensitive | lineage4 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229429 | HR-TB | lineage4.8 | None | ERR2229447 | Sensitive | lineage4.8 | None | ERR2229430 | Sensitive | lineage4.8 | dk | ERR2229795 | Sensitive | lineage4.8 | None | ERR2229708 | HR-TB | lineage4.8 | None | ERR2229719 | Sensitive | lineage4.8 | None | ERR2229482 | Sensitive | lineage4 | None | ERR2228814 | Sensitive | lineage4.8 | None | ERR2229501 | HR-TB | lineage4.9 | None | ERR2228811 | Sensitive | lineage4.8 | None | ERR2229502 | Sensitive | lineage4.9 | None | ERR2229416 | Sensitive | lineage4.8 | dk | ERR2229729 | Sensitive | lineage4 | None | ERR2228877 | Sensitive | lineage4.8 | dk | ERR2228905 | Sensitive | lineage4.8 | None | ERR2228886 | Sensitive | lineage4.8 | dk | ERR2228889 | Sensitive | lineage4.8 | dk | ERR2228919 | Sensitive | lineage4.8 | dk | ERR2228893 | Sensitive | lineage4.8 | dk | ERR2228911 | Sensitive | lineage4.8 | dk | ERR2245286 | HR-TB | lineage3.1.1 | None | ERR2513173 | Sensitive | lineage4.1.2 | None | ERR2245352 | RR-TB | lineage3.1.1 | no | ERR4817789 | Sensitive | lineage4.3.1 | None | ERR4817902 | Sensitive | lineage3.1.1 | None | ERR2512378 | Sensitive | lineage3.1.1 | no | ERR2513210 | Sensitive | lineage3 | gb | ERR2512474 | HR-TB | lineage1.1.2 | None | ERR4817601 | Sensitive | lineage2.2.1 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR4818574 | Other | lineage6 | None | ERR2503454 | Other | lineage1.1.1.1 | fi | ERR4818619 | Sensitive | lineage3 | None | ERR2512912 | Sensitive | lineage4.6.2.2 | None | ERR2513748 | Sensitive | lineage3 | gb | ERR4817658 | Sensitive | lineage5.1.3 | None | ERR4819207 | Sensitive | lineage3 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513871 | Sensitive | lineage3 | gb | ERR4819871 | Sensitive | lineage4.8 | None | ERR2513895 | Sensitive | lineage4.8 | None | ERR4820362 | Sensitive | lineage4.2 | None | ERR2514070 | Other | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819751 | Sensitive | None | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR4819947 | Sensitive | lineage4.1.1 | None | ERR2515032 | Other | lineage3 | None | ERR2515041 | Sensitive | lineage4.8 | None | ERR4827437 | Pre-XDR-TB | lineage2.2.1 | None | ERR2659167 | Sensitive | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821708 | Sensitive | lineage3 | None | ERR4829923 | HR-TB | lineage4.3.1 | it | SRR6045860 | Sensitive | lineage4.1.1.2 | None | ERR4829924 | HR-TB | lineage4.3.3 | it | SRR6046273 | Other | lineage3.1.2 | None | SRR6046553 | Sensitive | lineage3 | None | ERR4830822 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4828955 | HR-TB | lineage4.8 | None | SRR6046860 | Other | lineage4.4.1.1 | None |
---|