Rv2043c - c.-866T>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
255 Sensitive
14 RR-TB
22 HR-TB
40 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 340 |
| lineage1.2.2.2;lineage4.3.2.1 | 3 |
| lineage2.2.1.1;lineage4.3.2.1 | 1 |
| lineage2.2.1;lineage4.3.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 346 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13260502 | MDR-TB | lineage4.3.2.1 | None | ERR190346 | Sensitive | lineage4.3.2.1 | mw | ERR11252610 | Sensitive | lineage4.3.2.1 | None | ERR9030447 | RR-TB | lineage4.3.2.1 | None | ERR9120052 | MDR-TB | lineage4.3.2.1 | None | ERR279528 | Sensitive | lineage4.3.2.1 | None | ERR13260826 | HR-TB | lineage4.3.2.1 | None | ERR279614 | Sensitive | lineage4.3.2.1 | None | ERR10112841 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR9119736 | MDR-TB | lineage4.3.2.1 | None | SRR6896409 | Sensitive | lineage4.3.2.1 | None | ERR10748220 | RR-TB | lineage4.3.2.1 | None | ERR108131 | Sensitive | lineage4.3.2.1 | za | SRR4034425 | Sensitive | lineage4.3.2.1 | None | ERR11465027 | Sensitive | lineage4.3.2.1 | None | SRR29093590 | RR-TB | lineage4.3.2.1 | None | ERR11465768 | Sensitive | lineage4.3.2.1 | None | ERR13288905 | RR-TB | lineage4.3.2.1 | None | ERR13289055 | MDR-TB | lineage4.3.2.1 | None | SRR16156820 | MDR-TB | lineage4.3.2.1 | None | ERR11464987 | HR-TB | lineage4.3.2.1 | None | SRR16156778 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR279506 | Sensitive | lineage4.3.2.1 | None | SRR6896309 | Sensitive | lineage4.3.2.1 | None | SRR6982534 | Sensitive | lineage4.3.2.1 | None | ERR11465892 | Sensitive | lineage4.3.2.1 | None | ERR9120051 | MDR-TB | lineage4.3.2.1 | None | SRR6896390 | Sensitive | lineage4.3.2.1 | None | ERR6362570 | MDR-TB | lineage4.3.2.1 | None | SRR4034612 | Sensitive | lineage4.3.2.1 | za | SRR4034063 | Sensitive | lineage4.3.2.1 | za | SRR4034047 | Sensitive | lineage4.3.2.1 | za | SRR4034007 | Sensitive | lineage4.3.2.1 | za | SRR4034042 | Sensitive | lineage4.3.2.1 | za | SRR4034031 | Sensitive | lineage4.3.2.1 | za | SRR4034492 | Sensitive | lineage4.3.2.1 | za | SRR4034259 | Sensitive | lineage4.3.2.1 | za | SRR4034436 | Sensitive | lineage4.3.2.1 | za | SRR29096866 | MDR-TB | lineage4.3.2.1 | None | ERR279537 | Sensitive | lineage4.3.2.1 | None | ERR10610234 | RR-TB | lineage4.3.2.1 | None | ERR552696 | HR-TB | lineage4.3.2.1 | None | ERR9806626 | MDR-TB | lineage4.3.2.1 | None | ERR6362056 | MDR-TB | lineage4.3.2.1 | None | ERR9806863 | MDR-TB | lineage4.3.2.1 | None | ERR13292530 | MDR-TB | lineage4.3.2.1 | None | ERR495090 | Sensitive | lineage1.2.2.2;lineage4.3.2.1 | None | ERR11488415 | MDR-TB | lineage4.3.2.1 | None | SRR6896398 | Sensitive | lineage4.3.2.1 | None | ERR13288914 | HR-TB | lineage4.3.2.1 | None | ERR8774242 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR4423475 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR5987201 | Sensitive | lineage4.3.2.1 | None | ERR2660520 | Sensitive | lineage4.3.2.1 | None | ERR5987349 | MDR-TB | lineage4.3.2.1 | None | ERR495037 | Sensitive | lineage4.3.2.1 | None | ERR1035039 | MDR-TB | lineage4.3.2.1 | za | ERR13260794 | Sensitive | lineage4.3.2.1 | None | SRR3055718 | MDR-TB | lineage4.3.2.1 | None | ERR841462 | Sensitive | lineage4.3.2.1 | None | SRR10869009 | Sensitive | lineage4.3.2.1 | None | SRR29093587 | Sensitive | lineage4.3.2.1 | None | SRR4034281 | Sensitive | lineage4.3.2.1 | None | SRR4034480 | Sensitive | lineage4.3.2.1 | None | ERR13292529 | MDR-TB | lineage4.3.2.1 | None | SRR4034002 | Sensitive | lineage4.3.2.1 | za | ERR8774449 | Sensitive | lineage4.3.2.1 | None | SRR4034005 | Sensitive | lineage4.3.2.1 | za | SRR4034023 | Sensitive | lineage4.3.2.1 | za | SRR4034052 | Sensitive | lineage4.3.2.1 | za | SRR4034058 | Sensitive | lineage4.3.2.1 | za | SRR4033997 | Sensitive | lineage4.3.2.1 | za | SRR4034024 | Sensitive | lineage4.3.2.1 | za | SRR4034015 | Sensitive | lineage4.3.2.1 | za | SRR4034026 | Sensitive | lineage4.3.2.1 | za | SRR4034051 | Sensitive | lineage4.3.2.1 | za | SRR4034056 | Sensitive | lineage4.3.2.1 | za | SRR4034037 | Sensitive | lineage4.3.2.1 | za | SRR4034004 | Sensitive | lineage4.3.2.1 | za | SRR4034016 | Sensitive | lineage4.3.2.1 | za | SRR4034057 | Sensitive | lineage4.3.2.1 | za | SRR4034159 | Sensitive | lineage4.3.2.1 | za | ERR11465573 | Sensitive | lineage4.3.2.1 | None | SRR4034247 | Sensitive | lineage4.3.2.1 | za | SRR4034270 | Sensitive | lineage4.3.2.1 | za | SRR4034170 | Sensitive | lineage4.3.2.1 | za | ERR2199968 | HR-TB | lineage4.3.2.1 | None | SRR4034503 | Sensitive | lineage4.3.2.1 | za | SRR4034601 | Sensitive | lineage4.3.2.1 | za | SRR4034525 | Sensitive | lineage4.3.2.1 | za | ERR495059 | Sensitive | lineage4.3.2.1 | None | SRR4034634 | Sensitive | lineage4.3.2.1 | za | SRR4034030 | Sensitive | lineage4.3.2.1 | za | SRR4034017 | Sensitive | lineage4.3.2.1 | za | SRR4034021 | Sensitive | lineage4.3.2.1 | za | SRR4033999 | Sensitive | lineage4.3.2.1 | za | SRR4034025 | Sensitive | lineage4.3.2.1 | za | SRR4034039 | Sensitive | lineage4.3.2.1 | za | SRR4034020 | Sensitive | lineage4.3.2.1 | za | SRR4034040 | Sensitive | lineage4.3.2.1 | za | SRR4034050 | Sensitive | lineage4.3.2.1 | za | SRR4034059 | Sensitive | lineage4.3.2.1 | za | SRR4034045 | Sensitive | lineage4.3.2.1 | za | SRR4034041 | Sensitive | lineage4.3.2.1 | za | SRR4034146 | Sensitive | lineage4.3.2.1 | za | ERR4809156 | MDR-TB | lineage4.3.2.1 | za | ERR4809162 | MDR-TB | lineage4.3.2.1 | None | SRR4034325 | Sensitive | lineage4.3.2.1 | za | ERR4809226 | Sensitive | lineage4.3.2.1 | za | SRR4034001 | Sensitive | lineage4.3.2.1 | None | ERR4809261 | MDR-TB | lineage4.3.2.1 | za | ERR1633832 | Sensitive | lineage4.3.2.1 | za | ERR4808916 | Sensitive | lineage4.3.2.1 | None | ERR12141666 | Sensitive | lineage4.3.2.1 | None | ERR12141667 | HR-TB | lineage4.3.2.1 | None | ERR5918058 | HR-TB | lineage4.3.2.1 | za | ERR1023479 | Sensitive | lineage4.3.2.1 | None | ERR8699179 | Sensitive | lineage4.3.2.1 | None | ERR8699762 | Sensitive | lineage4.3.2.1 | None | ERR5918148 | Sensitive | lineage4.3.2.1 | za | ERR8700278 | Sensitive | lineage4.3.2.1 | None | SRR12708401 | MDR-TB | lineage4.3.2.1 | None | ERR8975144 | Sensitive | lineage4.3.2.1 | None | ERR8975186 | Sensitive | lineage4.3.2.1 | None | ERR8975969 | Sensitive | lineage4.3.2.1 | None | ERR9806907 | RR-TB | lineage4.3.2.1 | None | SRR2101342 | HR-TB | lineage4.3.2.1 | None | SRR2101404 | Sensitive | lineage4.3.2.1 | None | SRR2101423 | Sensitive | lineage4.3.2.1 | None | SRR2101503 | Sensitive | lineage4.3.2.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101639 | HR-TB | lineage4.3.2.1 | None | ERR3340729 | Sensitive | lineage4.3.2.1 | za | ERR3340732 | Sensitive | lineage2.2.1.1;lineage4.3.2.1 | za | ERR552221 | HR-TB | lineage4.3.2.1 | sz | ERR550794 | HR-TB | lineage4.3.2.1 | sz | ERR552695 | HR-TB | lineage4.3.2.1 | sz | ERR2199952 | Sensitive | lineage4.3.2.1 | sz | ERR11465630 | Sensitive | lineage4.3.2.1 | None | ERR4831594 | MDR-TB | lineage4.3.2.1 | None | ERR11465572 | Sensitive | lineage4.3.2.1 | None | ERR11252605 | Sensitive | lineage4.3.2.1 | None | ERR279558 | Sensitive | lineage4.3.2.1 | None | ERR13288727 | RR-TB | lineage4.3.2.1 | None | ERR2516052 | Sensitive | lineage4.3.2.1 | za | ERR495124 | Sensitive | lineage4.3.2.1 | None | ERR11465574 | Sensitive | lineage4.3.2.1 | None | ERR11466274 | Sensitive | lineage4.3.2.1 | None | ERR8773907 | HR-TB | lineage4.3.2.1 | None | ERR11465769 | Sensitive | lineage4.3.2.1 | None | ERR10748173 | MDR-TB | lineage4.3.2.1 | None | SRR16156773 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR4034006 | Sensitive | lineage4.3.2.1 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | ERR11466575 | Sensitive | lineage4.3.2.1 | None | ERR279486 | Sensitive | lineage4.3.2.1 | None | ERR495042 | Sensitive | lineage4.3.2.1 | None | SRR2101465 | Sensitive | lineage4.3.2.1 | None | SRR16156683 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR4034014 | Sensitive | lineage4.3.2.1 | za | SRR4034028 | Sensitive | lineage4.3.2.1 | za | SRR4034192 | Sensitive | lineage4.3.2.1 | za | SRR4034147 | Sensitive | lineage4.3.2.1 | za | SRR4034590 | Sensitive | lineage4.3.2.1 | za | SRR4034336 | Sensitive | lineage4.3.2.1 | za | SRR4034034 | Sensitive | lineage4.3.2.1 | za | SRR4034003 | Sensitive | lineage4.3.2.1 | za | ERR1633957 | Sensitive | lineage4.3.2.1 | za | ERR1633865 | Sensitive | lineage4.3.2.1 | za | ERR1633813 | Sensitive | lineage4.3.2.1 | za | ERR1633894 | Sensitive | lineage4.3.2.1 | za | ERR1633808 | Sensitive | lineage4.3.2.1 | za | ERR108132 | Sensitive | lineage4.3.2.1 | za | SRR16156793 | HR-TB | lineage4.3.2.1 | None | SRR2101398 | Sensitive | lineage4.3.2.1 | None | SRR6982280 | HR-TB | lineage4.3.2.1 | None | ERR495089 | Sensitive | lineage4.3.2.1 | None | ERR10610137 | MDR-TB | lineage4.3.2.1 | None | ERR9806867 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR279570 | Sensitive | lineage4.3.2.1 | None | ERR9119719 | Sensitive | lineage4.3.2.1 | None | SRR6896288 | Sensitive | lineage4.3.2.1 | None | ERR11465592 | Sensitive | lineage4.3.2.1 | None | ERR11466350 | Sensitive | lineage4.3.2.1 | None | SRR26112496 | Sensitive | lineage4.3.2.1 | None | SRR6896392 | Sensitive | lineage4.3.2.1 | None | SRR6896522 | Sensitive | lineage4.3.2.1 | None | ERR10748201 | MDR-TB | lineage4.3.2.1 | None | ERR7361940 | Sensitive | lineage4.3.2.1 | None | SRR10869307 | Sensitive | lineage4.3.2.1 | None | SRR6896289 | HR-TB | lineage4.3.2.1 | None | SRR6487127 | Sensitive | lineage4.3.2.1 | None | SRR16156853 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR13292531 | Other | lineage4.3.2.1 | None | SRR29093977 | Sensitive | lineage4.3.2.1 | None | SRR6856105 | Sensitive | lineage4.3.2.1 | None | SRR4034236 | Sensitive | lineage4.3.2.1 | za | SRR4034303 | Sensitive | lineage4.3.2.1 | za | SRR4034392 | Sensitive | lineage4.3.2.1 | za | SRR6896491 | Sensitive | lineage4.3.2.1 | None | SRR4034403 | Sensitive | lineage4.3.2.1 | za | SRR4034414 | Sensitive | lineage4.3.2.1 | za | ERR9806818 | RR-TB | lineage4.3.2.1 | None | SRR16156769 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR495017 | Sensitive | lineage4.3.2.1 | None | ERR4808941 | Sensitive | lineage4.3.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | ERR4809088 | HR-TB | lineage4.3.2.1 | za | ERR8686170 | Sensitive | lineage4.3.2.1 | None | ERR8686175 | Sensitive | lineage4.3.2.1 | None | ERR8686563 | Sensitive | lineage4.3.2.1 | None | ERR1023450 | Sensitive | lineage4.3.2.1 | None | ERR8699161 | Sensitive | lineage4.3.2.1 | None | ERR11466481 | Sensitive | lineage4.3.2.1 | None | ERR8975594 | HR-TB | lineage4.3.2.1 | None | ERR8975925 | Sensitive | lineage4.3.2.1 | None | ERR8975425 | HR-TB | lineage4.3.2.1 | None | ERR279559 | Sensitive | lineage1.2.2.2;lineage4.3.2.1 | None | ERR8975551 | Sensitive | lineage4.3.2.1 | None | ERR8975720 | HR-TB | lineage4.3.2.1 | None | SRR6855997 | Sensitive | lineage4.3.2.1 | None | ERR1193896 | HR-TB | lineage4.3.2.1 | sz | ERR1193895 | Sensitive | lineage4.3.2.1 | sz | ERR1193752 | Sensitive | lineage4.3.2.1 | za | SRR4034064 | Sensitive | lineage4.3.2.1 | None | ERR221529 | Sensitive | lineage4.3.2.1 | mw | ERR5987305 | Sensitive | lineage4.3.2.1 | None | ERR9806892 | Sensitive | lineage4.3.2.1 | None | ERR279487 | Sensitive | lineage4.3.2.1 | None | ERR11775056 | Sensitive | lineage4.3.2.1 | None | ERR9120137 | Sensitive | lineage4.3.2.1 | None | ERR2515295 | Sensitive | lineage4.3.2.1 | za | ERR13289056 | MDR-TB | lineage4.3.2.1 | None | ERR4831537 | MDR-TB | lineage4.3.2.1 | None | ERR13288761 | MDR-TB | lineage4.3.2.1 | None | ERR13286156 | MDR-TB | lineage4.3.2.1 | None | ERR9992840 | XDR-TB | lineage4.3.2.1 | None | ERR9992679 | MDR-TB | lineage4.3.2.1 | None | ERR6052024 | Sensitive | lineage4.3.2.1 | None | ERR2515127 | Sensitive | lineage4.3.2.1 | za | ERR2515759 | MDR-TB | lineage4.3.2.1 | za | ERR8975510 | Sensitive | lineage4.3.2.1 | None | ERR1035011 | MDR-TB | lineage4.3.2.1 | za | ERR495101 | Sensitive | lineage4.3.2.1 | None | ERR7737782 | MDR-TB | lineage4.3.2.1 | None | SRR29096173 | RR-TB | lineage4.3.2.1 | None | SRR6855948 | Sensitive | lineage4.3.2.1 | None | ERR495145 | Sensitive | lineage4.3.2.1 | None | SRR4034062 | Sensitive | lineage4.3.2.1 | za | SRR4034048 | Sensitive | lineage4.3.2.1 | za | SRR4034010 | Sensitive | lineage4.3.2.1 | za | SRR4033998 | Sensitive | lineage4.3.2.1 | za | SRR4034036 | Sensitive | lineage4.3.2.1 | za | SRR4034027 | Sensitive | lineage4.3.2.1 | za | SRR4034347 | Sensitive | lineage4.3.2.1 | za | SRR4034009 | Sensitive | lineage4.3.2.1 | za | SRR4034181 | Sensitive | lineage4.3.2.1 | za | SRR4034043 | Sensitive | lineage4.3.2.1 | za | SRR4034214 | Sensitive | lineage4.3.2.1 | za | SRR4034258 | Sensitive | lineage4.3.2.1 | za | SRR4034469 | Sensitive | lineage4.3.2.1 | za | SRR4034203 | Sensitive | lineage4.3.2.1 | za | SRR4034012 | Sensitive | lineage4.3.2.1 | za | SRR4034046 | Sensitive | lineage4.3.2.1 | za | ERR1633786 | Sensitive | lineage4.3.2.1 | za | ERR1633866 | Sensitive | lineage1.2.2.2;lineage4.3.2.1 | za | ERR1633842 | Sensitive | lineage4.3.2.1 | za | ERR1633916 | Sensitive | lineage4.3.2.1 | za | ERR11466564 | Sensitive | lineage4.3.2.1 | None | ERR279511 | Sensitive | lineage4.3.2.1 | None | SRR4034370 | Sensitive | lineage4.3.2.1 | None | SRR6896546 | Sensitive | lineage4.3.2.1 | None | ERR279593 | Sensitive | lineage4.3.2.1 | None | SRR10303343 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR16156788 | MDR-TB | lineage4.3.2.1 | None | ERR5987289 | RR-TB | lineage4.3.2.1 | None | SRR10430396 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR29093304 | Sensitive | lineage4.3.2.1 | None | ERR13260808 | Sensitive | lineage4.3.2.1 | None | SRR29096563 | MDR-TB | lineage4.3.2.1 | None | SRR26331594 | MDR-TB | lineage4.3.2.1 | None | ERR11465462 | Sensitive | lineage4.3.2.1 | None | ERR1035051 | RR-TB | lineage4.3.2.1 | za | ERR1750927 | Sensitive | lineage4.3.2.1 | za | SRR6982092 | Other | lineage4.3.2.1 | None | ERR5987319 | Sensitive | lineage4.3.2.1 | None | ERR495068 | Sensitive | lineage4.3.2.1 | None | SRR5535773 | Sensitive | lineage4.3.2.1 | None | SRR29094039 | Sensitive | lineage4.3.2.1 | None | ERR13292532 | Other | lineage4.3.2.1 | None | ERR8774451 | Sensitive | lineage4.3.2.1 | None | SRR4034008 | Sensitive | lineage4.3.2.1 | za | SRR4034018 | Sensitive | lineage4.3.2.1 | za | SRR4034049 | Sensitive | lineage4.3.2.1 | za | SRR4034019 | Sensitive | lineage4.3.2.1 | za | SRR4034053 | Sensitive | lineage4.3.2.1 | za | SRR4034054 | Sensitive | lineage4.3.2.1 | za | SRR4034013 | Sensitive | lineage4.3.2.1 | za | SRR4034035 | Sensitive | lineage4.3.2.1 | za | SRR4034038 | Sensitive | lineage4.3.2.1 | za | SRR4034032 | Sensitive | lineage4.3.2.1 | za | SRR4034148 | Sensitive | lineage4.3.2.1 | za | SRR4034061 | Sensitive | lineage4.3.2.1 | za | SRR4034358 | Sensitive | lineage4.3.2.1 | za | SRR4034369 | Sensitive | lineage4.3.2.1 | za | SRR4034381 | Sensitive | lineage4.3.2.1 | za | SRR4034447 | Sensitive | lineage4.3.2.1 | za | SRR4034225 | Sensitive | lineage4.3.2.1 | za | SRR4034292 | Sensitive | lineage4.3.2.1 | za | SRR4034314 | Sensitive | lineage4.3.2.1 | za | SRR4034458 | Sensitive | lineage4.3.2.1 | za | SRR4034481 | Sensitive | lineage4.3.2.1 | za | SRR29093387 | Sensitive | lineage4.3.2.1 | None | SRR4034536 | Sensitive | lineage4.3.2.1 | za | SRR16156858 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR4034623 | Sensitive | lineage4.3.2.1 | za | ERR8975098 | Sensitive | lineage4.3.2.1 | None | SRR4034547 | Sensitive | lineage4.3.2.1 | za | ERR11775019 | MDR-TB | lineage4.3.2.1 | None | ERR11252627 | Sensitive | lineage4.3.2.1 | None | ERR5918086 | HR-TB | lineage4.3.2.1 | za | ERR8700360 | Sensitive | lineage4.3.2.1 | None | ERR5918033 | Sensitive | lineage4.3.2.1 | za | ERR5918047 | Sensitive | lineage4.3.2.1 | za | ERR8699203 | Sensitive | lineage4.3.2.1 | None | ERR8699201 | MDR-TB | lineage4.3.2.1 | None | ERR8686163 | Sensitive | lineage4.3.2.1 | None | ERR8975022 | RR-TB | lineage4.3.2.1 | None | SRR10868974 | Sensitive | lineage4.3.2.1 | None | SRR3724746 | Sensitive | lineage4.3.2.1 | None | SRR4034514 | Sensitive | lineage4.3.2.1 | None | ERR8975500 | RR-TB | lineage4.3.2.1 | None | ERR11466198 | Sensitive | lineage4.3.2.1 | None | ERR11464999 | Sensitive | lineage4.3.2.1 | None | ERR8975994 | Sensitive | lineage4.3.2.1 | None | ERR8976099 | Sensitive | lineage4.3.2.1 | None | ERR8975674 | RR-TB | lineage4.3.2.1 | None | ERR8975936 | Sensitive | lineage4.3.2.1 | None | ERR2515824 | Sensitive | lineage4.3.2.1 | za | ERR2515866 | Sensitive | lineage4.3.2.1 | za | ERR2515722 | Sensitive | lineage4.3.2.1 | za | ERR2515616 | Sensitive | lineage4.3.2.1 | za | ERR2515543 | Sensitive | lineage4.3.2.1 | za | SRR6982193 | Sensitive | lineage4.3.2.1 | None |
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