lineage | Count |
---|---|
lineage4.1.2.1 | 27 |
lineage2.2.1 | 24 |
lineage2.2.1.1 | 3 |
lineage4.1.1.3 | 1 |
lineage4.2.1 | 5 |
lineage4.4.2 | 2 |
lineage3.1.2.1 | 2 |
lineage4.1.3 | 2 |
lineage4.3.3 | 1 |
lineage1.1.2;lineage2.2.1 | 1 |
lineage3.1.2 | 2 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 71 |
ID | Drug resistance | Lineage | Country iso2 | SRR28393646 | MDR-TB | lineage4.1.2.1 | None | SAMN02628485 | Pre-XDR-TB | lineage2.2.1 | ir | SRR25207155 | MDR-TB | lineage2.2.1 | None | SRR28393411 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3287341 | MDR-TB | lineage4.1.2.1 | pe | ERR6362010 | MDR-TB | lineage2.2.1.1 | None | SRR1172034 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SAMN02628508 | Pre-XDR-TB | lineage2.2.1 | ir | SAMEA5569520 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1183088 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02628483 | Pre-XDR-TB | lineage2.2.1 | ir | ERR4813711 | MDR-TB | lineage4.1.2.1 | None | ERR9119793 | MDR-TB | lineage2.2.1.1 | None | SRR1180166 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972446 | MDR-TB | lineage2.2.1 | None | ERR9029863 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3287327 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10748318 | MDR-TB | lineage4.1.1.3 | None | ERR3794517 | MDR-TB | lineage2.2.1 | None | ERR10762447 | Pre-XDR-TB | lineage4.2.1 | None | ERR4812643 | HR-TB | lineage4.1.2.1 | None | ERR5866419 | MDR-TB | lineage2.2.1 | None | ERR13290806 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813154 | XDR-TB | lineage4.1.2.1 | None | SRR28394294 | MDR-TB | lineage4.1.2.1 | None | SRR1174328 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024901 | MDR-TB | lineage4.4.2 | cn | SRR7829578 | MDR-TB | lineage4.2.1 | None | ERR5866420 | MDR-TB | lineage2.2.1 | None | ERR4798327 | Pre-XDR-TB | lineage3.1.2.1 | in | SRR3724791 | MDR-TB | lineage4.1.3 | None | ERR7911176 | MDR-TB | lineage2.2.1 | vn | SRR29017326 | MDR-TB | lineage4.3.3 | None | SRR13870398 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1183047 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | None | SRR22424879 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4811993 | MDR-TB | lineage4.1.2.1 | pe | ERR12118040 | MDR-TB | lineage4.1.2.1 | None | SRR28393855 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR13260672 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1173868 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173684 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273105 | MDR-TB | lineage2.2.1.1 | None | ERR751440 | MDR-TB | lineage4.1.2.1 | pe | SRR16370614 | MDR-TB | lineage2.2.1 | None | SRR1172091 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813323 | MDR-TB | lineage4.1.2.1 | None | SRR29056028 | MDR-TB | lineage4.1.2.1 | None | ERR12117988 | MDR-TB | lineage4.1.2.1 | None | SAMN02628484 | Pre-XDR-TB | lineage2.2.1 | ir | ERR2510880 | MDR-TB | lineage4.2.1 | None | SRR28393643 | MDR-TB | lineage4.1.2.1 | None | ERR688013 | Pre-XDR-TB | lineage3.1.2 | None | SRR1173552 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085316 | MDR-TB | lineage4.2.1 | None | ERR1034581 | Pre-XDR-TB | lineage3.1.2 | pk | ERR12118038 | MDR-TB | lineage4.1.2.1 | None | SRR2024896 | MDR-TB | lineage4.4.2 | cn | SRR5341329 | Pre-XDR-TB | lineage4.8 | in | SRR28393354 | MDR-TB | lineage4.1.2.1 | None | SRR1173347 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393577 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR3086380 | MDR-TB | lineage4.2.1 | None | ERR5866418 | MDR-TB | lineage2.2.1 | None | SRR6485038 | MDR-TB | lineage2.2.1 | None | SRR1174308 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393744 | HR-TB | lineage4.1.2.1 | None | ERR551807 | MDR-TB | lineage4.1.2.1 | None | SRR7517794 | MDR-TB | lineage4.1.3 | ci |
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