Rv2043c - p.Ala171Val
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
2 HR-TB
77 MDR-TB
40 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 64 |
| lineage2.2.1.2 | 9 |
| lineage1.1.2 | 1 |
| lineage4.2.2.2 | 3 |
| lineage3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage1.1.1.1 | 3 |
| lineage1.2.1.2 | 2 |
| lineage4.1.4 | 12 |
| lineage4 | 2 |
| lineage2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 10 |
| lineage4.3.3 | 2 |
| lineage4.1.1 | 1 |
| lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.2;lineage3.1.2.1 | 1 |
| lineage1.1.3.1;lineage4.3.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 122 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23311052 | MDR-TB | lineage2.2.1 | None | ERR13267101 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13290608 | MDR-TB | lineage2.2.1 | None | SRR6964619 | MDR-TB | lineage1.1.2 | None | SRR29093311 | MDR-TB | lineage4.2.2.2 | None | SRR23938681 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808787 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082650 | MDR-TB | lineage3 | None | SAMN02414972 | MDR-TB | lineage2.2.1 | se | SRR28351664 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR28393567 | MDR-TB | lineage4.1.2.1 | None | ERR7911287 | MDR-TB | lineage1.1.1.1 | vn | ERR7911286 | MDR-TB | lineage1.1.1.1 | vn | ERR5866554 | MDR-TB | lineage2.2.1 | None | ERR4820667 | MDR-TB | lineage1.2.1.2 | gb | SRR14782615 | MDR-TB | lineage2.2.1 | None | ERR13284227 | MDR-TB | lineage2.2.1 | None | SRR28706468 | MDR-TB | lineage2.2.1 | None | SAMN03246584 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10762378 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872219 | MDR-TB | lineage4.1.4 | None | SRR14781844 | MDR-TB | lineage2.2.1 | None | ERR4872188 | MDR-TB | lineage4.1.4 | None | SRR13870420 | Pre-XDR-TB | lineage4 | None | ERR5865497 | MDR-TB | lineage2.2.1 | None | ERR553391 | MDR-TB | lineage2.2.1 | None | ERR9119586 | MDR-TB | lineage4.1.4 | None | SRR1723476 | MDR-TB | lineage2.2.1 | cn | ERR4872124 | MDR-TB | lineage4.1.4 | None | ERR9119507 | MDR-TB | lineage4.1.4 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR7737937 | MDR-TB | lineage4.2.2.2 | None | SRR10040250 | XDR-TB | lineage2.2.2 | None | ERR4011969 | MDR-TB | lineage4.2.2.2 | None | SRR11871433 | MDR-TB | lineage2.2.1 | None | ERR3273220 | MDR-TB | lineage4.1.2 | None | ERR13261614 | MDR-TB | lineage4.3.4.1 | None | ERR13267102 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR552936 | MDR-TB | lineage2.2.1 | None | SRR23938662 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165437 | MDR-TB | lineage2.2.1 | None | SRR11871435 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284328 | MDR-TB | lineage2.2.1 | None | ERR4796414 | Pre-XDR-TB | lineage4.3.3 | in | ERR13260086 | MDR-TB | lineage4.1.1 | None | ERR1035296 | HR-TB | lineage4.9 | br | SRR1723865 | Pre-XDR-TB | lineage2.2.1 | None | ERR751401 | MDR-TB | lineage4.3.3 | pe | ERR751626 | MDR-TB | lineage4.3.4.1 | pe | SRR1162848 | MDR-TB | lineage2.2.1 | None | ERR8975450 | HR-TB | lineage4.3.4.2.1 | None | SRR25827439 | XDR-TB | lineage2.2.1.2;lineage3.1.2.1 | None | ERR1352334 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1352338 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4872101 | MDR-TB | lineage4.1.4 | None | ERR13290607 | MDR-TB | lineage2.2.1 | None | SRR6480602 | Pre-XDR-TB | lineage2.2.1 | None | SRR8847007 | MDR-TB | lineage2.2.1 | None | ERR4827948 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797089 | Pre-XDR-TB | lineage1.1.3.1;lineage4.3.3 | in | ERR2307604 | MDR-TB | lineage2.2.1 | None | ERR13286048 | RR-TB | lineage2.2.1.1 | None | ERR5865496 | MDR-TB | lineage2.2.1 | None | SRR14782012 | MDR-TB | lineage2.2.1 | None | ERR1035359 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR551453 | MDR-TB | lineage2.2.1 | None | ERR5866555 | MDR-TB | lineage2.2.1 | None | SRR1166870 | MDR-TB | lineage2.2.1 | None | SRR1167080 | MDR-TB | lineage2.2.1 | None | ERR10762283 | MDR-TB | lineage2.2.1 | None | ERR11068705 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR6930927 | MDR-TB | lineage1.2.1.2 | None | ERR9119530 | MDR-TB | lineage4.1.4 | None | SRR26936948 | MDR-TB | lineage1.1.1.1 | None | SRR1723864 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058683 | MDR-TB | lineage2.2.1 | None | ERR13285820 | MDR-TB | lineage2.2.1 | None | ERR11488975 | MDR-TB | lineage2.2.1 | None | SRR29017413 | MDR-TB | lineage1.1.3.1 | None | ERR13285818 | MDR-TB | lineage2.2.1 | None | ERR13284485 | MDR-TB | lineage2.2.1 | None | ERR13260530 | MDR-TB | lineage4.3.4.1 | None | ERR13290606 | MDR-TB | lineage2.2.1 | None | ERR4799882 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR25827390 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR9119488 | MDR-TB | lineage4.1.4 | None | ERR4800236 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4872082 | MDR-TB | lineage4.1.4 | None | ERR1352335 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287367 | MDR-TB | lineage4.3.4.1 | pe | SRR25827854 | Pre-XDR-TB | lineage2.2.1.2;lineage3 | None | ERR4813027 | MDR-TB | lineage4.3.4.1 | None | ERR502955 | MDR-TB | lineage2.2.1 | None | ERR2510840 | Pre-XDR-TB | lineage2.2.1 | it | SRR849475 | MDR-TB | lineage2.2.1 | None | ERR4813738 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR10808535 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824369 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1352339 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1352337 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4827920 | MDR-TB | lineage2.2.1 | None | ERR4872120 | MDR-TB | lineage4.1.4 | None | SRR11871411 | MDR-TB | lineage2.2.1 | None | SRR606318 | MDR-TB | lineage2.2.1 | None | ERR1352336 | Pre-XDR-TB | lineage2.2.1 | cn | ERR9124971 | MDR-TB | lineage2.2.1 | None | ERR13290609 | MDR-TB | lineage2.2.1 | None | SRR25827406 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13285927 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207261 | MDR-TB | lineage2.2.1 | None | ERR13261607 | MDR-TB | lineage4.3.4.1 | None | ERR13266524 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR5866056 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762397 | MDR-TB | lineage2.2.1 | None | ERR13260434 | MDR-TB | lineage4.3.4.1 | None | ERR13260671 | Pre-XDR-TB | lineage4 | None | ERR9119526 | MDR-TB | lineage4.1.4 | None | ERR4813706 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR13284598 | MDR-TB | lineage3 | None | ERR9119613 | MDR-TB | lineage4.1.4 | None | SRR29539019 | MDR-TB | lineage2.2.1 | None | ERR5866057 | Pre-XDR-TB | lineage2.2.1 | None |
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