lineage | Count |
---|---|
lineage4.4 | 13 |
lineage2.2.1 | 15 |
lineage2.2.2 | 1 |
lineage4.8 | 1 |
lineage1.2.2.2 | 2 |
lineage2.2.1.1 | 3 |
1 | |
lineage3.1.2 | 2 |
lineage4.4;lineage3 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | ERR9117706 | Other | lineage4.4 | None | SRR10305617 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117843 | Other | lineage4.4 | None | SRR11871436 | XDR-TB | lineage2.2.1 | None | SRR11871423 | XDR-TB | lineage2.2.1 | None | SRR10306025 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871427 | XDR-TB | lineage2.2.1 | None | SRR11871440 | XDR-TB | lineage2.2.1 | None | SRR11871447 | XDR-TB | lineage2.2.1 | None | SRR2099928 | Other | lineage4.4 | None | SRR18213656 | Other | lineage4.4 | None | SRR19612359 | Pre-XDR-TB | lineage2.2.2 | None | SRR20139560 | MDR-TB | lineage4.8 | None | SRR2101262 | Other | lineage4.4 | None | SRR2100055 | Other | lineage4.4 | None | SAMN03246286 | MDR-TB | lineage2.2.1 | cn | SRR21747029 | MDR-TB | lineage1.2.2.2 | None | SRR5073892 | HR-TB | lineage2.2.1.1 | vn | ERR2514359 | Other | lineage4.4 | gb | ERR2512642 | Other | lineage4.4 | gb | ERR2514962 | Other | lineage4.4 | None | ERR270618 | Other | lineage4.4 | None | SAMEA2533959 | MDR-TB | lineage2.2.1 | uz | ERR4831713 | HR-TB | lineage2.2.1.1 | vn | SRR6339662 | MDR-TB | lineage2.2.1 | au | SRR6484920 | MDR-TB | lineage2.2.1 | None | ERR4821727 | Other | lineage4.4 | gb | SRR8357446 | MDR-TB | lineage2.2.1 | None | SRR6824474 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824677 | MDR-TB | lineage2.2.1 | cn | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR1723578 | Pre-XDR-TB | lineage2.2.1 | cn | ERR386857 | Other | lineage4.4 | None | ERR4553779 | MDR-TB | None | ERR4797096 | Pre-XDR-TB | lineage3.1.2 | None | ERR4799831 | Pre-XDR-TB | lineage3.1.2 | in | ERR11044274 | MDR-TB | lineage1.2.2.2 | None | ERR351925 | Other | lineage4.4 | None | ERR386858 | HR-TB | lineage4.4;lineage3 | None |
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