Rv2043c - p.Gly105Asp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
3 RR-TB
6 HR-TB
56 MDR-TB
35 Pre-XDR-TB
3 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 21 |
| lineage4.1.1.1 | 47 |
| 19 | |
| lineage1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.2.2.1 | 3 |
| lineage4.1.2.1 | 1 |
| lineage2.1 | 3 |
| lineage4.9 | 2 |
| lineage4.4.2 | 1 |
| lineage3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage6.1.1 | 3 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6257052 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832566 | MDR-TB | lineage2.2.1 | None | SRR4423149 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29017080 | MDR-TB | lineage4.1.1.1 | None | SRR29017059 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29017221 | MDR-TB | lineage4.1.1.1 | None | SRR4423144 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29017578 | MDR-TB | lineage4.1.1.1 | None | ERR4553981 | MDR-TB | None | SRR3105787 | Other | lineage1.1 | None | ERR2307723 | MDR-TB | lineage2.2.1 | None | ERR5865071 | MDR-TB | lineage2.2.1 | None | SRR29016860 | MDR-TB | lineage4.1.1.1 | None | SRR29017202 | MDR-TB | lineage4.1.1.1 | None | SRR29016956 | MDR-TB | lineage4.1.1.1 | None | SRR6797389 | MDR-TB | lineage4.1.1.1 | None | SRR29017228 | MDR-TB | lineage4.1.1.1 | None | SRR29539821 | MDR-TB | lineage2.2.1 | None | SRR29017601 | MDR-TB | lineage4.1.1.1 | None | SRR7755752 | MDR-TB | lineage4.2.1 | None | ERR2307550 | MDR-TB | lineage2.2.1 | None | SRR29274251 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR2307661 | MDR-TB | lineage2.2.1 | None | SRR6797272 | MDR-TB | lineage4.1.1.1 | None | ERR3132235 | HR-TB | lineage4.1.1.1 | None | ERR4553886 | Pre-XDR-TB | None | ERR4553712 | MDR-TB | None | ERR4553932 | Pre-XDR-TB | None | SRR28706643 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553894 | XDR-TB | None | ERR4553863 | Pre-XDR-TB | None | ERR4553513 | MDR-TB | None | ERR4553798 | MDR-TB | None | ERR4553700 | MDR-TB | None | ERR4553604 | MDR-TB | None | ERR2516440 | RR-TB | lineage4.1.2.1 | pe | SRR5709748 | Pre-XDR-TB | lineage2.1 | th | SRR7645939 | MDR-TB | lineage4.2.1 | None | SRR29017163 | MDR-TB | lineage4.1.1.1 | None | SRR25515017 | MDR-TB | lineage2.2.1 | None | ERR5865072 | MDR-TB | lineage2.2.1 | None | SRR11715716 | Pre-XDR-TB | lineage2.1 | None | SRR29016886 | MDR-TB | lineage4.1.1.1 | None | SRR5485553 | RR-TB | lineage4.9 | None | SRR29017437 | MDR-TB | lineage4.1.1.1 | None | SRR16149136 | MDR-TB | lineage4.2.2.1 | None | SRR29017204 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29017393 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13264957 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4553769 | MDR-TB | None | SRR29017679 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR12916911 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738504 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017199 | XDR-TB | lineage4.1.1.1 | None | ERR4553831 | HR-TB | None | ERR4553848 | MDR-TB | lineage4.1.1.1 | None | ERR13264939 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR5485592 | RR-TB | lineage4.9 | None | SRR16149113 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR29289279 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR18002890 | MDR-TB | lineage4.4.2 | None | SRR29289278 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29017697 | MDR-TB | lineage4.1.1.1 | None | SRR17658015 | MDR-TB | lineage4.1.1.1 | None | ERR4797687 | MDR-TB | lineage3.1 | in | SRR29016874 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29274031 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817769 | HR-TB | lineage1.1.2 | None | SRR6797426 | HR-TB | lineage4.1.1.1 | None | SRR11828985 | Pre-XDR-TB | lineage2.1 | th | ERR2307719 | MDR-TB | lineage2.2.1 | None | SRR16087942 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553618 | MDR-TB | None | SRR29539172 | Pre-XDR-TB | lineage2.2.1 | None | SRR1577820 | MDR-TB | lineage6.1.1 | None | SRR29017617 | MDR-TB | lineage4.1.1.1 | None | SRR1577831 | MDR-TB | lineage6.1.1 | None | SRR6797637 | HR-TB | lineage4.1.1.1 | None | SRR1577834 | MDR-TB | lineage6.1.1 | None | SRR29017631 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29017448 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4553683 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4553949 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR6797630 | Other | lineage4.1.1.1 | None | SRR29017223 | MDR-TB | lineage4.1.1.1 | None | SRR13232787 | Pre-XDR-TB | lineage2.2.1 | None | SRR21279452 | Other | lineage2.2.1 | None | ERR2510421 | Pre-XDR-TB | lineage4.1.1.1 | pk | SRR29017305 | MDR-TB | lineage4.1.1.1 | None | SRR6797612 | HR-TB | lineage4.1.1.1 | None | ERR4553855 | MDR-TB | None | ERR4553879 | MDR-TB | None | ERR4553485 | MDR-TB | None | SRR28045946 | XDR-TB | lineage2.2.1 | None | ERR3287537 | MDR-TB | lineage4.3.4.1 | None | SRR28119796 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553467 | MDR-TB | None | ERR1213950 | MDR-TB | lineage4.1.1.1 | bd | SRR6797627 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR3132270 | MDR-TB | lineage4.1.1.1 | None | ERR4553917 | MDR-TB | lineage4.1.1.1 | None | SRR29017586 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29016859 | MDR-TB | lineage4.1.1.1 | None | ERR2307722 | MDR-TB | lineage2.2.1 | None | ERR4553457 | MDR-TB | None | ERR4553810 | MDR-TB | None |
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