lineage | Count |
---|---|
lineage2.2.1 | 9 |
lineage1.1.2 | 1 |
lineage4 | 12 |
3 | |
lineage2.1 | 3 |
lineage4.1.1 | 14 |
lineage3.1 | 1 |
lineage4.1.1.1 | 4 |
lineage4.1.2.1 | 1 |
lineage4.2.1 | 2 |
lineage4.1 | 6 |
lineage4.3.4.1 | 1 |
lineage6.1.1 | 3 |
lineage4.2.2.1 | 2 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 | SRR21279452 | Other | lineage2.2.1 | None | ERR4817769 | HR-TB | lineage1.1.2 | None | SRR6797630 | HR-TB | lineage4 | None | SRR25515017 | MDR-TB | lineage2.2.1 | None | SRR3105787 | Pre-XDR-TB | None | SRR5709748 | Pre-XDR-TB | lineage2.1 | th | SRR6797627 | Pre-XDR-TB | lineage4.1.1 | None | SRR6797637 | HR-TB | lineage4.1.1 | None | SRR6797426 | MDR-TB | lineage4.1.1 | None | SRR5485553 | MDR-TB | None | SRR6257052 | Pre-XDR-TB | lineage2.2.1 | None | SRR5485592 | RR-TB | None | ERR4797687 | MDR-TB | lineage3.1 | in | ERR1213950 | MDR-TB | lineage4.1.1.1 | bd | ERR2516440 | RR-TB | lineage4.1.2.1 | pe | ERR1213945 | HR-TB | lineage4.1.1.1 | bd | ERR3132235 | HR-TB | lineage4.1.1 | None | ERR3132270 | MDR-TB | lineage4.1.1 | None | SRR6832566 | MDR-TB | lineage2.2.1 | None | SRR6797389 | MDR-TB | lineage4.1.1 | None | SRR6797272 | MDR-TB | lineage4.1.1 | None | ERR2510421 | Pre-XDR-TB | lineage4.1.1.1 | pk | SRR6797612 | HR-TB | lineage4.1.1 | None | SRR7645939 | MDR-TB | lineage4.2.1 | None | SRR9738504 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755752 | MDR-TB | lineage4.2.1 | None | ERR4553604 | MDR-TB | lineage4.1 | None | ERR4553457 | MDR-TB | lineage4.1 | None | ERR4553485 | MDR-TB | lineage4 | None | ERR3287537 | MDR-TB | lineage4.3.4.1 | None | ERR4553467 | MDR-TB | lineage4 | None | ERR4553513 | MDR-TB | lineage4 | None | ERR4553712 | MDR-TB | lineage4.1.1 | None | ERR4553618 | MDR-TB | lineage4 | None | ERR4553700 | MDR-TB | lineage4 | None | ERR4553683 | Pre-XDR-TB | lineage4 | None | ERR4553863 | Pre-XDR-TB | lineage4 | None | ERR4553769 | MDR-TB | lineage4 | None | ERR4553810 | MDR-TB | lineage4.1.1 | None | ERR4553798 | MDR-TB | lineage4 | None | ERR4553831 | MDR-TB | lineage4.1.1 | None | ERR4553848 | MDR-TB | lineage4.1 | None | ERR4553855 | Pre-XDR-TB | lineage4 | None | ERR4553879 | Pre-XDR-TB | lineage4.1.1 | None | ERR4553886 | Pre-XDR-TB | lineage4.1 | None | ERR4553917 | Pre-XDR-TB | lineage4.1.1 | None | ERR4553894 | Pre-XDR-TB | lineage4.1 | None | ERR4553981 | MDR-TB | lineage4 | None | ERR4553949 | Pre-XDR-TB | lineage4.1.1 | None | ERR4553932 | Pre-XDR-TB | lineage4.1 | None | SRR11828985 | Pre-XDR-TB | lineage2.1 | th | SRR17658015 | MDR-TB | lineage4.1.1.1 | None | ERR5865072 | MDR-TB | lineage2.2.1 | None | SRR16087942 | Pre-XDR-TB | lineage2.2.1 | None | SRR1577831 | MDR-TB | lineage6.1.1 | None | ERR5865071 | MDR-TB | lineage2.2.1 | None | SRR13232787 | Pre-XDR-TB | lineage2.2.1 | None | SRR11715716 | Pre-XDR-TB | lineage2.1 | None | SRR1577820 | MDR-TB | lineage6.1.1 | None | SRR16149113 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR18002890 | MDR-TB | lineage4.4.2 | None | SRR1577834 | MDR-TB | lineage6.1.1 | None | SRR16149136 | MDR-TB | lineage4.2.2.1 | None |
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