lineage | Count |
---|---|
lineage2.2.2 | 2 |
lineage3 | 4 |
lineage2.2.1 | 63 |
lineage3.1.2 | 8 |
lineage4.1.2.1 | 4 |
lineage4.2.2.2 | 5 |
lineage4.2.1 | 4 |
lineage4.3.2.1 | 6 |
lineage4.1.1.3 | 2 |
lineage4.8 | 1 |
lineage4.1.1 | 1 |
lineage4.3.3 | 5 |
lineage4.1.2 | 2 |
lineage1.2.2.2 | 1 |
lineage2.2.1.1 | 3 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage3.1 | 1 |
lineage2.2.1;lineage4.1.2.1 | 1 |
lineage4.9 | 2 |
lineage4.4.1.1 | 1 |
lineage2.2.1.2 | 1 |
lineage1.1.2 | 1 |
lineage4.1.3 | 1 |
spoligotype | Count |
---|---|
None | 120 |
ID | Drug resistance | Lineage | Country iso2 | SRR25515487 | Pre-XDR-TB | lineage2.2.2 | None | ERR2510425 | MDR-TB | lineage3 | pk | ERR5864437 | MDR-TB | lineage2.2.1 | None | SRR6484973 | MDR-TB | lineage2.2.1 | None | SRR29356788 | MDR-TB | lineage2.2.1 | None | ERR13267122 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | SRR16088123 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866005 | MDR-TB | lineage4.1.2.1 | None | ERR11044164 | MDR-TB | lineage4.2.2.2 | None | SRR14801599 | MDR-TB | lineage4.2.1 | None | ERR6362570 | MDR-TB | lineage4.3.2.1 | None | ERR9027227 | MDR-TB | lineage4.2.2.2 | None | ERR3794377 | MDR-TB | lineage2.2.1 | None | SRR29274056 | MDR-TB | lineage4.1.2.1 | None | SRR24256027 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864444 | MDR-TB | lineage2.2.1 | None | ERR7911165 | MDR-TB | lineage2.2.1 | vn | ERR10877856 | MDR-TB | lineage2.2.1 | None | ERR10748282 | MDR-TB | lineage4.1.1.3 | None | ERR11049829 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310897 | Pre-XDR-TB | lineage4.2.1 | None | ERR4830944 | Pre-XDR-TB | lineage2.2.1 | np | SRR22424884 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813771 | HR-TB | lineage4.8 | None | ERR2516703 | MDR-TB | lineage4.1.1 | nl | SRR29289263 | Pre-XDR-TB | lineage3 | None | ERR13261350 | MDR-TB | lineage3.1.2 | None | SRR28888089 | HR-TB | lineage4.3.3 | None | SRR28044957 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799050 | Pre-XDR-TB | lineage3.1.2 | None | SRR14801601 | MDR-TB | lineage4.2.1 | None | ERR5864445 | MDR-TB | lineage2.2.1 | None | ERR11049565 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888044 | XDR-TB | lineage4.3.3 | None | SRR23862102 | MDR-TB | lineage2.2.1 | None | ERR9119736 | MDR-TB | lineage4.3.2.1 | None | SRR28046067 | MDR-TB | lineage2.2.1 | None | SRR16156820 | MDR-TB | lineage4.3.2.1 | None | ERR4828923 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864440 | MDR-TB | lineage2.2.1 | None | ERR13266769 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864442 | MDR-TB | lineage2.2.1 | None | ERR5864439 | MDR-TB | lineage2.2.1 | None | ERR2707120 | MDR-TB | lineage4.1.2 | cd | SRR13232403 | MDR-TB | lineage2.2.1 | None | ERR8975805 | MDR-TB | lineage4.1.1.3 | None | ERR13262152 | HR-TB | lineage3.1.2 | None | ERR13291034 | MDR-TB | lineage1.2.2.2 | None | ERR2510376 | MDR-TB | lineage3 | None | ERR5864441 | MDR-TB | lineage2.2.1 | None | ERR10610137 | MDR-TB | lineage4.3.2.1 | None | ERR13267104 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484974 | MDR-TB | lineage2.2.1 | None | ERR4276883 | MDR-TB | lineage4.2.2.2 | None | ERR7162982 | MDR-TB | lineage2.2.1 | None | SRR21277852 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5864438 | MDR-TB | lineage2.2.1 | None | SRR15368839 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28706671 | MDR-TB | lineage2.2.1 | None | ERR3639718 | MDR-TB | lineage2.2.1 | None | SRR18715335 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316101 | MDR-TB | lineage2.2.1 | None | SRR7655954 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR25515528 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277841 | MDR-TB | lineage2.2.1 | None | ERR3794400 | MDR-TB | lineage2.2.1 | None | SRR14807630 | Pre-XDR-TB | lineage4.2.1 | None | SRR28351333 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773833 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829951 | MDR-TB | lineage3 | pk | ERR4797871 | Pre-XDR-TB | lineage3.1 | in | SRR29385272 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799756 | MDR-TB | lineage3.1.2 | in | SRR29772457 | MDR-TB | lineage3.1.2 | None | SRR24710180 | MDR-TB | lineage2.2.1 | None | ERR4830658 | Pre-XDR-TB | lineage2.2.1 | np | SRR29093911 | MDR-TB | lineage2.2.1 | None | ERR13267134 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370236 | MDR-TB | lineage2.2.1 | None | SRR28435002 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4798032 | Pre-XDR-TB | lineage3.1.2 | in | SRR5818423 | RR-TB | lineage4.9 | None | SRR11662695 | MDR-TB | lineage2.2.1 | None | SRR25827640 | XDR-TB | lineage2.2.1 | None | SRR6257042 | MDR-TB | lineage4.3.3 | None | ERR5864446 | MDR-TB | lineage2.2.1 | None | SRR1002686 | MDR-TB | lineage4.3.3 | None | ERR4797148 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797204 | Other | lineage4.4.1.1 | in | SRR16088377 | MDR-TB | lineage2.2.1 | None | SRR11662383 | MDR-TB | lineage2.2.1 | None | ERR4276882 | MDR-TB | lineage4.2.2.2 | None | ERR4831275 | MDR-TB | lineage4.2.2.2 | de | SRR5153309 | MDR-TB | lineage4.1.2.1 | None | SRR5153274 | MDR-TB | lineage2.2.1 | None | ERR9806626 | MDR-TB | lineage4.3.2.1 | None | ERR4827792 | MDR-TB | lineage2.2.1 | None | SRR28239759 | MDR-TB | lineage2.2.1 | None | ERR2517123 | MDR-TB | lineage3.1.2 | gb | SRR15465769 | MDR-TB | lineage2.2.1.2 | None | ERR5864443 | MDR-TB | lineage2.2.1 | None | ERR10748201 | MDR-TB | lineage4.3.2.1 | None | SRR29681246 | MDR-TB | lineage2.2.1 | None | SRR15014654 | MDR-TB | lineage1.1.2 | None | SRR22424777 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639711 | MDR-TB | lineage2.2.1 | None | SRR10397123 | MDR-TB | lineage2.2.1 | None | SRR29273663 | MDR-TB | lineage4.1.2.1 | None | SRR24222952 | MDR-TB | lineage2.2.1 | None | SRR24709986 | MDR-TB | lineage2.2.1 | None | ERR4800371 | MDR-TB | lineage2.2.1.1 | in | ERR13267109 | Pre-XDR-TB | lineage2.2.1 | None | SRR3724998 | MDR-TB | lineage4.1.3 | ci | SRR5818411 | RR-TB | lineage4.9 | None | SRR3082113 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888045 | Pre-XDR-TB | lineage4.3.3 | None | SRR15364430 | Pre-XDR-TB | lineage2.2.1 | None | SRR29230986 | MDR-TB | lineage4.1.2 | None | ERR13260060 | MDR-TB | lineage2.2.1 | None |
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