lineage | Count |
---|---|
lineage4.2.2.2 | 3 |
lineage2.2.1 | 19 |
lineage4.2.1 | 12 |
lineage4.1.2 | 2 |
lineage4.1.3 | 9 |
lineage4.3.2.1 | 2 |
lineage4.1 | 1 |
lineage4.3.4.2 | 4 |
lineage3.1 | 1 |
lineage4.6.1.2 | 6 |
lineage4.3.2.1;lineage2.2.1 | 1 |
lineage1.1.1.1 | 3 |
lineage2.2.1.1;lineage1.1.1.1 | 1 |
2 | |
lineage2.2.1.1 | 2 |
lineage4.4.2 | 1 |
lineage4.2.2.2;lineage2.2.1 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 71 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831005 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4822373 | Pre-XDR-TB | lineage2.2.1 | kg | ERR4872278 | Pre-XDR-TB | lineage4.2.1 | None | ERR4872294 | Pre-XDR-TB | lineage4.2.1 | None | ERR4872286 | Pre-XDR-TB | lineage4.2.1 | None | ERR11488659 | MDR-TB | lineage4.1.2 | None | SRR998830 | MDR-TB | lineage4.1.3 | None | ERR11488448 | HR-TB | lineage4.1.2 | None | SRR998829 | MDR-TB | lineage4.1.3 | None | SRR998850 | MDR-TB | lineage4.1.3 | None | SRR998835 | MDR-TB | lineage4.1.3 | None | SRR998836 | MDR-TB | lineage4.1.3 | None | SRR9971159 | MDR-TB | lineage4.3.2.1 | None | SRR998851 | MDR-TB | lineage4.1 | None | SRR998849 | MDR-TB | lineage4.1.3 | None | ERR11798703 | Pre-XDR-TB | lineage4.2.1 | None | ERR11798702 | Pre-XDR-TB | lineage4.2.1 | None | SRR998852 | MDR-TB | lineage4.1.3 | None | ERR12268360 | MDR-TB | lineage2.2.1 | None | ERR11798636 | MDR-TB | lineage4.3.4.2 | None | ERR3273092 | MDR-TB | lineage2.2.1 | None | ERR3273177 | MDR-TB | lineage2.2.1 | None | ERR4830552 | MDR-TB | lineage4.3.2.1 | None | ERR4553455 | MDR-TB | lineage3.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR16088254 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315480 | MDR-TB | lineage4.3.2.1;lineage2.2.1 | None | SRR10303290 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049651 | MDR-TB | lineage4.6.1.2 | None | SRR10380217 | MDR-TB | lineage4.3.4.2 | None | SRR10380218 | MDR-TB | lineage4.3.4.2 | None | SRR10379987 | Pre-XDR-TB | lineage4.2.1 | None | SRR10379995 | Pre-XDR-TB | lineage4.2.1 | None | SRR10430368 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049652 | MDR-TB | lineage4.6.1.2 | None | SRR1162865 | MDR-TB | lineage1.1.1.1 | None | SRR1140664 | MDR-TB | lineage4.6.1.2 | None | SRR1144788 | MDR-TB | lineage1.1.1.1 | None | SRR1144811 | MDR-TB | lineage2.2.1.1;lineage1.1.1.1 | None | SRR1146325 | MDR-TB | None | SRR1049976 | MDR-TB | lineage4.1.3 | None | SRR1062912 | MDR-TB | lineage4.6.1.2 | None | SRR1162855 | MDR-TB | lineage1.1.1.1 | None | SRR14782654 | Pre-XDR-TB | lineage4.2.1 | None | SRR14781875 | Pre-XDR-TB | lineage4.2.1 | None | SRR11972316 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15600364 | MDR-TB | lineage2.2.1.1 | None | SRR14801884 | Pre-XDR-TB | lineage4.2.1 | None | SRR24709930 | MDR-TB | lineage2.2.1 | None | SRR18003005 | RR-TB | lineage2.2.1 | None | ERR11081695 | MDR-TB | lineage4.2.2.2 | None | SRR25827771 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR24256145 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887730 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710248 | MDR-TB | lineage2.2.1 | None | SRR25207045 | MDR-TB | lineage4.4.2 | None | SRR25395643 | Pre-XDR-TB | lineage4.3.4.2 | None | SAMN02381022 | MDR-TB | lineage4.6.1.2 | ug | SRR6824295 | MDR-TB | lineage2.2.1 | cn | SAMN03246351 | MDR-TB | lineage2.2.1 | cn | SRR25827820 | Pre-XDR-TB | lineage4.2.2.2;lineage2.2.1 | None | SRR23691422 | MDR-TB | lineage2.2.1 | None | SRR3743477 | Pre-XDR-TB | lineage4.2.1 | None | ERR7911493 | Pre-XDR-TB | lineage2.2.1 | vn | ERR552677 | MDR-TB | lineage2.2.1 | uz | SAMEA2534455 | Pre-XDR-TB | lineage2.2.1 | uz | SAMEA2534025 | MDR-TB | lineage2.2.1 | uz | SRR8791274 | Other | None | SAMN02231185 | MDR-TB | lineage4.1.3 | ml | SRR20969977 | MDR-TB | lineage2.2.2 | None | SRR23310872 | MDR-TB | lineage4.2.1 | None |
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