SRR24709983
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15368886
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15369005
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715062
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782425
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801716
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR17657987
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207262
|
RR-TB
|
lineage2.2.1
|
None
|
SRR17657986
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR17657981
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21277429
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR21277257
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21277444
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR23938650
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21277859
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21279363
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR23938604
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23938679
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24828597
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR17657984
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24709902
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR24709935
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710083
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4815551
|
Other
|
lineage2.2.1
|
None
|
ERR1034677
|
MDR-TB
|
lineage4.3.3
|
co
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2
|
None
|
ERR1035192
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035175
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMEA2534207
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR718273
|
MDR-TB
|
lineage2.2.1
|
th
|
SAMEA2534157
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534197
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR6079937
|
MDR-TB
|
lineage2.2.1.1
|
au
|
SRR7517822
|
Pre-XDR-TB
|
lineage2.2.1
|
ch
|
SAMEA2534205
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534307
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534216
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534326
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR751552
|
Pre-XDR-TB
|
lineage2.2.1
|
pe
|
SAMEA2534415
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534840
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534862
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534924
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534908
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534938
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534992
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2535005
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR275182
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMEA2535098
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2535177
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533505
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533368
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR550812
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533542
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533585
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533546
|
HR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533776
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533610
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533664
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR551121
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533596
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533726
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533941
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533879
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533898
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533814
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533856
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534086
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2534058
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR551199
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533444
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2535338
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMEA2533574
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR4830031
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827630
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228056
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4827916
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7898220
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4830164
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827610
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827668
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827776
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827845
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828069
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3335760
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR3256128
|
MDR-TB
|
lineage4.1.1.3
|
ph
|
ERR3256127
|
MDR-TB
|
lineage4.1.1.3
|
ph
|
ERR2516723
|
Pre-XDR-TB
|
lineage2.2.1
|
pe
|
ERR4796953
|
MDR-TB
|
lineage1.2.2.1
|
in
|
ERR4797074
|
Pre-XDR-TB
|
lineage4.8
|
in
|
ERR4799803
|
MDR-TB
|
lineage3
|
in
|
ERR4799635
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR6484946
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799202
|
Pre-XDR-TB
|
lineage4.8
|
in
|
ERR4798738
|
XDR-TB
|
lineage2.2.1
|
in
|
SRR6484901
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799961
|
XDR-TB
|
lineage4.8
|
in
|
ERR4800089
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800064
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4872348
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR998802
|
MDR-TB
|
lineage5.1.1;lineage4.1.3
|
None
|
ERR3132228
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR998800
|
MDR-TB
|
lineage4.6.2.2;lineage4.1
|
None
|
SRR6785471
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4872356
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1034853
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR998803
|
MDR-TB
|
lineage5.1.1;lineage4.1.3
|
None
|
SRR998698
|
MDR-TB
|
lineage4.6.2.2;lineage4.1.3
|
None
|
SRR8368396
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR998696
|
MDR-TB
|
lineage4.6.2.2;lineage4.1.3
|
None
|
ERR10680190
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639716
|
MDR-TB
|
lineage4.7
|
None
|
ERR1394278
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11043802
|
MDR-TB
|
lineage4.7
|
None
|
ERR11043803
|
MDR-TB
|
lineage4.7
|
None
|
ERR3794449
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3794406
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794442
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3794404
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794478
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794511
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3794487
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3794498
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR17657985
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794536
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794547
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403245
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798564
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798559
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800162
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR17658011
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358741
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4800618
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665865
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5897111
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR11662491
|
MDR-TB
|
lineage1.1.3.3
|
None
|
SRR16088551
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR17657983
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1172848
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR10380143
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380142
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1145851
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR13232478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232621
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232546
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232656
|
MDR-TB
|
lineage2.2.1
|
None
|