Rv2043c - p.Ile6Thr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
0 HR-TB
59 MDR-TB
43 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 2 |
| lineage2.2.1 | 76 |
| lineage3 | 5 |
| lineage1.1.2 | 9 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.2.1 | 2 |
| lineage4.6.2.2 | 4 |
| lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR25389528 | Pre-XDR-TB | lineage2.2.1 | None | ERR13281467 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801717 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085290 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796895 | MDR-TB | lineage3 | in | ERR4796997 | MDR-TB | lineage3 | in | SRR24256054 | MDR-TB | lineage2.2.1 | None | SAMN02414908 | MDR-TB | lineage1.1.2 | se | SAMN02414851 | MDR-TB | lineage2.2.1 | se | ERR4822283 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290837 | MDR-TB | lineage2.2.1 | None | SRR25389486 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144791 | MDR-TB | lineage1.1.2 | None | ERR4811239 | RR-TB | lineage2.2.1 | None | SRR28706378 | MDR-TB | lineage2.2.1 | None | ERR2307418 | MDR-TB | lineage2.2.1 | None | ERR108450 | MDR-TB | lineage2.2.1 | ru | SRR25389525 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260068 | MDR-TB | lineage4.1.2.1 | None | SRR14807525 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR1559739 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510686 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510690 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510702 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510703 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510710 | Pre-XDR-TB | lineage2.2.1 | it | SRR1165553 | MDR-TB | lineage2.2.1 | None | ERR9125454 | MDR-TB | lineage1.2.1.2.1 | None | SRR14801390 | MDR-TB | lineage4.2.1 | None | SRR10040151 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207155 | MDR-TB | lineage2.2.1 | None | SRR1165540 | MDR-TB | lineage2.2.1 | None | ERR4797261 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290281 | MDR-TB | lineage2.2.1 | None | ERR2307470 | MDR-TB | lineage2.2.1 | None | SRR13232662 | Pre-XDR-TB | lineage2.2.1 | None | SRR26936928 | MDR-TB | lineage2.2.1 | None | ERR13290279 | MDR-TB | lineage2.2.1 | None | ERR13266671 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389526 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517825 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872338 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866556 | MDR-TB | lineage2.2.1 | None | ERR9119502 | MDR-TB | lineage4.6.2.2 | None | ERR1559741 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872111 | MDR-TB | lineage4.6.2.2 | None | ERR2510434 | Pre-XDR-TB | lineage4.9 | pk | SRR1162741 | MDR-TB | lineage2.2.1 | None | ERR4799708 | MDR-TB | lineage3 | in | SRR25389524 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799687 | MDR-TB | lineage3 | in | SRR7517696 | Pre-XDR-TB | lineage2.2.1 | None | SRR1146277 | MDR-TB | lineage1.1.2 | None | SRR1165535 | MDR-TB | lineage2.2.1 | None | ERR7911450 | MDR-TB | lineage4.3.2 | za | SRR18715272 | Other | lineage4.3.3 | None | SRR7829576 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085292 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284860 | MDR-TB | lineage2.2.1 | None | ERR1559740 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310995 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737665 | MDR-TB | lineage4.3.4.2.1 | None | ERR4276855 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370225 | MDR-TB | lineage2.2.1 | None | SRR28706461 | MDR-TB | lineage2.2.1 | None | SRR10040136 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872096 | MDR-TB | lineage4.6.2.2 | None | SRR6257096 | MDR-TB | lineage2.2.1 | None | SRR13232641 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166864 | MDR-TB | lineage2.2.1 | None | SRR11972306 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119517 | MDR-TB | lineage4.6.2.2 | None | SRR25389527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872314 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800679 | MDR-TB | lineage2.2.1 | None | ERR13290278 | MDR-TB | lineage2.2.1 | None | ERR13290419 | MDR-TB | lineage1.1.2 | None | SRR28351385 | MDR-TB | lineage4.2.1 | None | SRR22351858 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290420 | MDR-TB | lineage1.1.2 | None | ERR4799653 | MDR-TB | lineage3 | in | ERR5866557 | MDR-TB | lineage2.2.1 | None | ERR4798666 | Pre-XDR-TB | lineage2.2.1 | in | SAMN02414859 | MDR-TB | lineage2.2.1 | se | SRR1162709 | MDR-TB | lineage2.2.1 | None | ERR7911166 | MDR-TB | lineage2.2.1 | vn | SRR25389514 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310992 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290421 | MDR-TB | lineage1.1.2 | None | SRR1166932 | MDR-TB | lineage2.2.1 | None | ERR2510709 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510723 | Pre-XDR-TB | lineage2.2.1 | it | ERR4872355 | MDR-TB | lineage2.2.1 | None | SRR25207396 | RR-TB | lineage2.2.1 | None | SRR8380010 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058724 | MDR-TB | lineage1.2.1.2.1 | None | SRR28706383 | MDR-TB | lineage2.2.1 | None | SRR3086365 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165563 | MDR-TB | lineage2.2.1 | None | SRR23311054 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163076 | MDR-TB | lineage1.1.2 | None | ERR13290418 | MDR-TB | lineage1.1.2 | None | SRR1163465 | MDR-TB | lineage1.1.2 | None | ERR13290280 | MDR-TB | lineage2.2.1 | None |
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