Rv2043c - p.Ser104Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
6 HR-TB
207 MDR-TB
53 Pre-XDR-TB
1 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 106 |
| lineage2.2.1 | 90 |
| lineage4.1.2.1 | 9 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 9 |
| lineage1.2.1.2.1 | 35 |
| lineage2.2.2 | 15 |
| lineage4.2.1 | 2 |
| lineage3 | 4 |
| lineage4 | 3 |
| lineage4.3.3 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 2 |
| lineage4.1.3 | 4 |
| lineage5.2 | 1 |
| lineage2.2 | 3 |
| lineage1.1.1 | 3 |
| lineage4.9 | 1 |
| lineage1.2.2.2;lineage3;lineage4.4.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage6.3.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 303 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29081581 | MDR-TB | lineage4.3.2 | None | ERR776456 | MDR-TB | lineage4.3.2 | None | SRR29681383 | MDR-TB | lineage2.2.1 | None | SRR29274059 | MDR-TB | lineage4.1.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1180259 | MDR-TB | lineage2.2.1 | None | SRR29539401 | XDR-TB | lineage4.3.4.2 | None | ERR776660 | MDR-TB | lineage4.3.2 | None | SRR1013539 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972554 | MDR-TB | lineage4.3.2 | None | ERR9806669 | MDR-TB | lineage4.3.2.1 | None | ERR12328174 | Other | lineage1.2.1.2.1 | None | ERR4972478 | MDR-TB | lineage4.3.2 | None | SRR1048836 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048839 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165597 | MDR-TB | lineage2.2.1 | None | ERR10748495 | MDR-TB | lineage2.2.1 | None | ERR4972542 | MDR-TB | lineage4.3.2 | None | ERR4972545 | MDR-TB | lineage4.3.2 | None | SRR29081564 | Pre-XDR-TB | lineage4.3.2 | None | SRR29081639 | MDR-TB | lineage4.3.2 | None | SRR14807455 | MDR-TB | lineage2.2.1 | None | ERR5866074 | MDR-TB | lineage2.2.1 | None | ERR772262 | MDR-TB | lineage4.3.2 | None | ERR776662 | MDR-TB | lineage4.3.2 | None | SRR1013625 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165541 | MDR-TB | lineage2.2.1 | None | ERR12328186 | Other | lineage1.2.1.2.1 | None | SRR1173260 | MDR-TB | lineage4.3.2.1 | None | ERR2510408 | Pre-XDR-TB | lineage2.2.1 | pk | SRR14802033 | MDR-TB | lineage2.2.1 | None | SRR14782531 | HR-TB | lineage4.2.1 | None | SRR1013540 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662700 | MDR-TB | lineage1.2.1.2.1 | None | SRR29017152 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181061 | MDR-TB | lineage2.2.1 | None | ERR4972565 | MDR-TB | lineage4.3.2 | None | ERR4800011 | MDR-TB | lineage3 | in | ERR4830106 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049812 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972555 | MDR-TB | lineage4.3.2 | None | SAMN02360548 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02360549 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02403634 | MDR-TB | lineage4.3.2.1 | za | ERR4972497 | MDR-TB | lineage4.3.2 | None | ERR3287866 | Pre-XDR-TB | lineage4 | None | SAMN02360622 | Pre-XDR-TB | lineage2.2.1 | kr | ERR2184488 | MDR-TB | lineage4.3.3 | pe | ERR768003 | Other | lineage1.2.1.2.1 | th | SRR6153236 | Other | lineage1.2.1.2.1 | ca | ERR751726 | Other | lineage1.2.1.2.1 | th | ERR4832023 | MDR-TB | lineage2.2.1 | None | ERR4832048 | MDR-TB | lineage2.2.1 | vn | ERR4830731 | MDR-TB | lineage4.4.1.1 | dz | ERR4828658 | Other | lineage1.2.1.2.1 | vn | ERR4830742 | MDR-TB | lineage4.4.1.1 | dz | ERR4972491 | Pre-XDR-TB | lineage4.3.2 | None | ERR4972585 | MDR-TB | lineage4.3.2 | None | ERR8975533 | MDR-TB | lineage4.3.2.1 | None | ERR8975699 | MDR-TB | lineage2.2.1 | None | ERR4972563 | MDR-TB | lineage4.3.2 | None | ERR776462 | MDR-TB | lineage4.3.2 | None | ERR776665 | MDR-TB | lineage4.3.2 | None | ERR776666 | MDR-TB | lineage4.3.2 | None | SRR2100825 | Other | lineage1.2.1.2.1 | None | ERR2516945 | MDR-TB | lineage4.8 | gb | ERR2516810 | MDR-TB | lineage4.8 | gb | ERR2600461 | MDR-TB | lineage2.2.1 | None | ERR11049741 | MDR-TB | lineage4.1.3 | None | ERR4972552 | MDR-TB | lineage4.3.2 | None | ERR13290557 | MDR-TB | lineage2.2.1 | None | SRR5065336 | MDR-TB | lineage2.2.1 | vn | ERR2383627 | MDR-TB | lineage5.2 | fr | SRR25389423 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972566 | MDR-TB | lineage4.3.2 | None | SRR1003099 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003103 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553671 | MDR-TB | lineage2.2 | None | SRR6832519 | MDR-TB | lineage2.2.1 | None | SRR1175330 | MDR-TB | lineage4.3.2.1 | None | SRR1013537 | Pre-XDR-TB | lineage2.2.1 | None | ERR9029873 | Pre-XDR-TB | lineage4 | None | ERR776667 | MDR-TB | lineage4.3.2 | None | SRR3085284 | MDR-TB | lineage4.1.2.1 | None | ERR4972541 | MDR-TB | lineage4.3.2 | None | ERR4972502 | MDR-TB | lineage4.3.2 | None | ERR4972503 | MDR-TB | lineage4.3.2 | None | ERR4972505 | MDR-TB | lineage4.3.2 | None | ERR4972568 | MDR-TB | lineage4.3.2 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | ERR12328185 | Other | lineage1.2.1.2.1 | None | ERR776668 | MDR-TB | lineage4.3.2 | None | ERR776471 | MDR-TB | lineage4.3.2 | None | SRR1172294 | MDR-TB | lineage2.2.1 | None | ERR10680103 | MDR-TB | lineage1.1.1 | None | SRR6356969 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830637 | Pre-XDR-TB | lineage2.2.1 | tm | ERR776468 | MDR-TB | lineage4.3.2 | None | ERR776472 | MDR-TB | lineage4.3.2 | None | SRR18593225 | Pre-XDR-TB | lineage3 | None | SRR1048838 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182398 | Other | lineage1.2.1.2.1 | None | SRR4423153 | Pre-XDR-TB | lineage2.2.2 | None | ERR4972584 | MDR-TB | lineage4.3.2 | None | ERR776659 | MDR-TB | lineage4.3.2 | None | ERR12328182 | RR-TB | lineage1.2.1.2.1 | None | ERR776670 | MDR-TB | lineage4.3.2 | None | SRR29081607 | Pre-XDR-TB | lineage4.3.2 | None | SRR29081662 | MDR-TB | lineage4.3.2 | None | SRR1184014 | MDR-TB | lineage2.2.1 | None | SRR10808419 | MDR-TB | lineage4.3.3 | None | SRR29539564 | MDR-TB | lineage2.2.1 | None | SRR21690137 | Other | lineage1.2.1.2.1 | None | SRR29081620 | MDR-TB | lineage4.3.2 | None | ERR4553868 | MDR-TB | lineage2.2 | None | ERR4972484 | MDR-TB | lineage4.3.2 | None | SRR21732429 | Other | lineage1.2.1.2.1 | None | ERR772263 | MDR-TB | lineage4.3.2 | None | ERR4972474 | MDR-TB | lineage4.3.2 | None | SRR1166875 | MDR-TB | lineage2.2.1 | None | SRR9971020 | MDR-TB | lineage2.2.1 | None | ERR4553659 | MDR-TB | lineage2.2 | None | ERR776469 | MDR-TB | lineage4.3.2 | None | ERR776452 | MDR-TB | lineage4.3.2 | None | ERR776464 | MDR-TB | lineage4.3.2 | None | ERR7902674 | Other | lineage1.2.1.2.1 | None | ERR4830520 | MDR-TB | lineage2.2.1 | None | SRR5485546 | RR-TB | lineage4.9 | None | ERR772265 | MDR-TB | lineage4.3.2 | None | SRR29094479 | MDR-TB | lineage4.3.2 | None | SRR9971267 | MDR-TB | lineage2.2.1 | None | SRR24256351 | MDR-TB | lineage2.2.1 | None | SRR29081578 | MDR-TB | lineage4.3.2 | None | SRR3086362 | MDR-TB | lineage4.1.2.1 | None | ERR11049264 | MDR-TB | lineage4.1.3 | None | SRR24709919 | MDR-TB | lineage2.2.1 | None | SRR29051301 | Other | lineage1.2.1.2.1 | None | SRR1165634 | MDR-TB | lineage2.2.1 | None | SRR1180378 | MDR-TB | lineage2.2.1 | None | SRR1165231 | MDR-TB | lineage4.3.2.1 | None | ERR776454 | MDR-TB | lineage4.3.2 | None | ERR776458 | MDR-TB | lineage4.3.2 | None | SRR29081584 | MDR-TB | lineage4.3.2 | None | SRR833190 | HR-TB | lineage2.2.1 | None | ERR4972553 | MDR-TB | lineage4.3.2 | None | ERR4796787 | MDR-TB | lineage1.2.2.2;lineage3;lineage4.4.1.1 | in | SAMN02360621 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02414954 | MDR-TB | lineage2.2.1 | se | SAMN02403538 | MDR-TB | lineage2.2.1 | za | SRR11662517 | Other | lineage1.2.1.2.1 | None | SRR1049020 | Pre-XDR-TB | lineage2.2.2 | None | ERR2184227 | MDR-TB | lineage4.3.3 | pe | ERR4829388 | MDR-TB | lineage4.1.2.1 | it | ERR4831999 | MDR-TB | lineage2.2.1 | None | SRR10040361 | Pre-XDR-TB | lineage2.2.1 | None | SRR4423146 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975644 | MDR-TB | lineage4.3.2.1 | None | SRR833085 | MDR-TB | lineage2.2.1 | None | SRR2100896 | Other | lineage1.2.1.2.1 | None | ERR2432994 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR5817478 | MDR-TB | lineage2.2.2 | au | SRR6832390 | MDR-TB | lineage2.2.1 | None | ERR776470 | MDR-TB | lineage4.3.2 | None | SRR22251570 | Other | lineage1.2.1.2.1 | None | SRR25389430 | Pre-XDR-TB | lineage2.2.1 | None | DRR184609 | MDR-TB | lineage2.2.1 | vn | SRR25389422 | Pre-XDR-TB | lineage2.2.1 | None | ERR772254 | MDR-TB | lineage4.3.2 | None | ERR270799 | Other | lineage1.2.1.2.1 | None | SRR10828623 | MDR-TB | lineage1.2.1.2.1 | None | SRR11662408 | Pre-XDR-TB | lineage2.2.1 | None | ERR13439925 | MDR-TB | lineage2.2.1 | None | SRR1162829 | MDR-TB | lineage2.2.1 | None | SRR1048835 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680016 | MDR-TB | lineage1.1.1 | None | ERR4972591 | MDR-TB | lineage4.3.2 | None | SRR21726732 | MDR-TB | lineage2.2.1 | None | SRR17729356 | Other | lineage1.2.1.2.1 | None | SRR21689639 | Other | lineage1.2.1.2.1 | None | ERR4972562 | MDR-TB | lineage4.3.2 | None | ERR12328148 | Other | lineage1.2.1.2.1 | None | SAMN02053798 | HR-TB | lineage2.2.1 | za | ERR776663 | MDR-TB | lineage4.3.2 | None | ERR776461 | MDR-TB | lineage4.3.2 | None | ERR776669 | MDR-TB | lineage4.3.2 | None | SRR29081612 | MDR-TB | lineage4.3.2 | None | SRR6832528 | Pre-XDR-TB | lineage2.2.1 | None | SRR29081640 | MDR-TB | lineage4.3.2 | None | SRR29274062 | MDR-TB | lineage4.1.2.1 | None | ERR4553877 | MDR-TB | lineage2.2.2 | None | ERR772258 | MDR-TB | lineage4.3.2 | None | SRR25389429 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972543 | MDR-TB | lineage4.3.2 | None | ERR776459 | MDR-TB | lineage4.3.2 | None | ERR776460 | MDR-TB | lineage4.3.2 | None | ERR772257 | MDR-TB | lineage4.3.2 | None | ERR13290556 | MDR-TB | lineage2.2.1 | None | ERR13290554 | MDR-TB | lineage2.2.1 | None | ERR4972471 | MDR-TB | lineage4.3.2 | None | ERR772261 | MDR-TB | lineage4.3.2 | None | SRR4423139 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049019 | Pre-XDR-TB | lineage2.2.2 | None | ERR11067274 | Other | lineage1.2.1.2.1 | None | ERR776476 | MDR-TB | lineage4.3.2 | None | SRR29017412 | MDR-TB | lineage2.2.2 | None | SRR29539682 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866073 | MDR-TB | lineage2.2.1 | None | SRR29274133 | MDR-TB | lineage4.1.2.1 | None | ERR776455 | MDR-TB | lineage4.3.2 | None | ERR439968 | MDR-TB | lineage6.3.1 | None | ERR776672 | MDR-TB | lineage4.3.2 | None | SAMEA5570060 | Pre-XDR-TB | lineage4 | None | SRR1013538 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341438 | Other | lineage3 | None | SRR29017263 | Other | lineage1.2.1.2.1 | None | SRR12142420 | MDR-TB | lineage2.2.2 | None | SRR10808520 | MDR-TB | lineage4.3.3 | None | ERR13439924 | MDR-TB | lineage2.2.1 | None | ERR13260871 | MDR-TB | lineage2.2.1 | None | SRR833159 | Other | lineage2.2.1;lineage4.9 | None | ERR13272908 | Other | lineage1.2.1.2.1 | None | SRR29081656 | MDR-TB | lineage4.3.2 | None | ERR13262063 | MDR-TB | lineage4.2.2.2 | None | ERR4972561 | MDR-TB | lineage4.3.2 | None | ERR4972526 | MDR-TB | lineage4.3.2 | None | SRR833170 | HR-TB | lineage2.2.1 | None | SRR24799280 | MDR-TB | lineage2.2.1 | None | ERR776674 | MDR-TB | lineage4.3.2 | None | SRR16087884 | MDR-TB | lineage2.2.1 | None | ERR772256 | MDR-TB | lineage4.3.2 | None | SAMN02360593 | Pre-XDR-TB | lineage2.2.2 | kr | ERR270715 | Other | lineage1.2.1.2.1 | None | ERR776675 | MDR-TB | lineage4.3.2 | None | ERR4813829 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1167318 | MDR-TB | lineage4.3.2.1 | None | ERR4972479 | MDR-TB | lineage4.3.2 | None | ERR4972544 | MDR-TB | lineage4.3.2 | None | ERR4972546 | MDR-TB | lineage4.3.2 | None | SRR25827549 | Pre-XDR-TB | lineage3 | None | ERR4972589 | MDR-TB | lineage4.3.2 | None | ERR4972592 | MDR-TB | lineage4.3.2 | None | ERR4811185 | Pre-XDR-TB | lineage4.5 | cn | ERR751984 | Other | lineage1.2.1.2.1 | th | SRR28240064 | MDR-TB | lineage2.2.1 | None | ERR751829 | Other | lineage1.2.1.2.1 | th | SRR9971248 | MDR-TB | lineage2.2.1 | None | ERR776671 | MDR-TB | lineage4.3.2 | None | ERR1023300 | HR-TB | lineage1.2.1.2.1 | None | ERR4829393 | MDR-TB | lineage4.1.2.1 | it | ERR772260 | MDR-TB | lineage4.3.2 | None | SRR10380213 | MDR-TB | lineage4.2.1 | None | ERR776457 | MDR-TB | lineage4.3.2 | None | ERR776467 | MDR-TB | lineage4.3.2 | None | ERR776673 | MDR-TB | lineage4.3.2 | None | ERR137271 | MDR-TB | lineage2.2.1;lineage4.2.1 | ru | SRR5709903 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709863 | Pre-XDR-TB | lineage2.2.1 | th | SRR6824489 | MDR-TB | lineage2.2.1 | cn | SRR29094452 | MDR-TB | lineage4.3.2 | None | SAMN02585980 | MDR-TB | lineage2.2.1 | za | SRR28860026 | Other | lineage1.2.1.2.1 | None | ERR776453 | MDR-TB | lineage4.3.2 | None | ERR4972551 | MDR-TB | lineage4.3.2 | None | ERR4972587 | MDR-TB | lineage4.3.2 | None | ERR776463 | MDR-TB | lineage4.3.2 | None | SRR1169192 | MDR-TB | lineage2.2.1 | None | SRR29094450 | MDR-TB | lineage4.3.2 | None | ERR4972536 | HR-TB | lineage4.3.2 | None | SRR29017122 | MDR-TB | lineage2.2.2 | None | ERR776473 | MDR-TB | lineage4.3.2 | None | ERR776474 | MDR-TB | lineage4.3.2 | None | SRR6356943 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972564 | MDR-TB | lineage4.3.2 | None | ERR10610364 | MDR-TB | lineage4.3.2.1 | None | SRR11662327 | Pre-XDR-TB | lineage2.2.1 | None | SRR18054771 | MDR-TB | lineage2.2.1 | None | ERR13288779 | MDR-TB | lineage2.2.1 | None | ERR10680024 | MDR-TB | lineage1.1.1 | None | ERR4553872 | MDR-TB | lineage2.2.2 | None | ERR2510858 | MDR-TB | lineage4.1.2.1 | None | ERR772264 | MDR-TB | lineage4.3.2 | None | ERR4828649 | Other | lineage1.2.1.2.1 | vn | SRR1167327 | MDR-TB | lineage2.2.1 | None | SRR12882336 | Other | lineage1.2.1.2.1 | None | SRR12882285 | Other | lineage1.2.1.2.1 | None | ERR4972489 | MDR-TB | lineage4.3.2 | None | ERR4972508 | MDR-TB | lineage4.3.2 | None | SRR1013626 | Pre-XDR-TB | lineage2.2.2 | None | SRR21732871 | Other | lineage1.2.1.2.1 | None | ERR772259 | MDR-TB | lineage4.3.2 | None | SRR11662710 | MDR-TB | lineage2.2.1 | None | ERR13439923 | MDR-TB | lineage2.2.1 | None | SRR1003102 | Pre-XDR-TB | lineage2.2.1 | None | ERR2679273 | MDR-TB | lineage4.1.3 | None | ERR4972550 | Other | lineage4.3.2 | None | SRR29081618 | MDR-TB | lineage4.3.2 | None | ERR13290555 | MDR-TB | lineage2.2.1 | None | SRR29273959 | MDR-TB | lineage4.1.2.1 | None | SRR29126974 | MDR-TB | lineage4.1.3 | None | ERR9286026 | MDR-TB | lineage3.1.1 | None | ERR4972507 | MDR-TB | lineage4.3.2 | None | SRR25389424 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
