lineage | Count |
---|---|
lineage4.4 | 7 |
lineage2.2.1 | 9 |
lineage4.1.1 | 2 |
lineage4.2.1 | 2 |
lineage4.2.2.2 | 1 |
lineage3 | 2 |
lineage4.1.3 | 2 |
lineage4.1 | 1 |
lineage4.1.2.1 | 1 |
2 | |
lineage4 | 1 |
lineage4.4.2 | 6 |
lineage1.1.1.1 | 2 |
lineage4.8 | 1 |
lineage4.6.1.2 | 2 |
lineage1.2.1.2.1 | 1 |
lineage2.2.2 | 1 |
lineage4.5;lineage2.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.3 | 2 |
lineage6.2.1 | 1 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | SAMN02628478 | MDR-TB | lineage4.4 | ir | ERR4797860 | Pre-XDR-TB | lineage2.2.1 | in | ERR4872185 | MDR-TB | lineage4.1.1 | None | SRR6807742 | MDR-TB | lineage4.2.1 | None | SRR8217914 | MDR-TB | lineage2.2.1 | None | ERR4831501 | Pre-XDR-TB | lineage4.2.2.2 | pk | ERR2510587 | Pre-XDR-TB | lineage3 | pk | ERR2510501 | RR-TB | lineage3 | pk | SRR998756 | MDR-TB | lineage4.1.3 | None | SRR998758 | MDR-TB | lineage4.1.3 | None | SRR998757 | MDR-TB | lineage4.1 | None | ERR4830329 | MDR-TB | lineage2.2.1 | None | ERR10680210 | RR-TB | lineage4.1.2.1 | None | ERR4553994 | MDR-TB | None | SRR998759 | MDR-TB | lineage4 | None | SRR7645882 | MDR-TB | lineage4.2.1 | None | ERR11488975 | MDR-TB | lineage2.2.1 | None | ERR4553503 | MDR-TB | None | ERR9119389 | MDR-TB | lineage2.2.1 | None | SRR11662360 | MDR-TB | lineage4.4.2 | None | SRR22250177 | Sensitive | lineage1.1.1.1 | None | SRR1172713 | MDR-TB | lineage4.4 | None | ERR9119583 | MDR-TB | lineage4.1.1 | None | SRR10525374 | Pre-XDR-TB | lineage4.8 | None | SRR11662171 | MDR-TB | lineage4.4.2 | None | SRR1172944 | MDR-TB | lineage4.4 | None | SRR1174313 | MDR-TB | lineage4.6.1.2 | None | SRR1173544 | MDR-TB | lineage4.6.1.2 | None | SRR1174323 | MDR-TB | lineage4.4 | None | SRR1180218 | MDR-TB | lineage4.4 | None | SRR1183118 | MDR-TB | lineage4.4 | None | SRR12006567 | MDR-TB | lineage1.2.1.2.1 | None | SRR11662307 | MDR-TB | lineage4.4.2 | None | SRR16370454 | MDR-TB | lineage2.2.1 | None | SRR21277269 | MDR-TB | lineage2.2.2 | None | SRR21747017 | MDR-TB | lineage4.5;lineage2.2.1 | None | SRR10828615 | MDR-TB | lineage4.4.2 | None | SRR5709821 | MDR-TB | lineage4.4.2 | th | SRR26399222 | HR-TB | lineage2.2.1.1 | None | SRR26399430 | MDR-TB | lineage2.2.1 | None | ERR718287 | MDR-TB | lineage1.1.1.1 | th | SRR5709915 | MDR-TB | lineage4.4.2 | th | ERR1193864 | MDR-TB | lineage4.3.3 | uz | DRR185076 | MDR-TB | lineage2.2.1 | vn | SAMEA2534365 | MDR-TB | lineage4.3.3 | uz | ERR502893 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02628529 | MDR-TB | lineage4.4 | ir | ERR502506 | MDR-TB | lineage6.2.1 | gh |
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