Rv2043c - p.Val7Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
11 HR-TB
82 MDR-TB
79 Pre-XDR-TB
6 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 135 |
| lineage4.8 | 11 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage3 | 5 |
| lineage4.3.4.2 | 1 |
| lineage4.1.3 | 6 |
| lineage4.6.1.1 | 2 |
| lineage4.2.1 | 4 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage4.2.2 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.2.2.1 | 3 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02628499 | Pre-XDR-TB | lineage2.2.1 | ir | SAMN02628502 | Pre-XDR-TB | lineage2.2.1 | ir | SAMN02628501 | Pre-XDR-TB | lineage2.2.1 | ir | SAMN02628500 | Pre-XDR-TB | lineage2.2.1 | ir | ERR11488640 | MDR-TB | lineage4.8 | None | ERR4810850 | MDR-TB | lineage2.2.1 | cn | SRR28706396 | MDR-TB | lineage2.2.1 | None | ERR13284817 | MDR-TB | lineage2.2.1 | None | ERR8665833 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665523 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510712 | MDR-TB | lineage2.2.1 | it | SRR5152958 | HR-TB | lineage2.2.1 | None | SRR26937130 | MDR-TB | lineage2.2.1.1 | None | SRR1173628 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173675 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041800 | MDR-TB | lineage2.2.1 | rs | ERR2041691 | MDR-TB | lineage2.2.1 | rs | ERR2041704 | MDR-TB | lineage2.2.1 | rs | SRR6824593 | XDR-TB | lineage2.2.1 | cn | ERR2307642 | MDR-TB | lineage2.2.1 | None | ERR234566 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR21576567 | MDR-TB | lineage2.2.1.1 | None | SRR671721 | MDR-TB | lineage2.2.1 | cn | ERR117456 | MDR-TB | lineage2.2.1 | ru | ERR4828114 | MDR-TB | lineage2.2.1 | None | ERR137194 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR1173750 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917664 | MDR-TB | lineage2.2.1 | by | SRR13232786 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811000 | MDR-TB | lineage2.2.1 | cn | SRR26937027 | MDR-TB | lineage2.2.1 | None | SRR13232711 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080892 | MDR-TB | lineage3 | None | SRR13232548 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043291 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832498 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2041690 | MDR-TB | lineage2.2.1 | None | ERR13284051 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665768 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284776 | MDR-TB | lineage3 | None | SRR21001885 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152963 | HR-TB | lineage2.2.1 | None | SRR21001884 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368720 | MDR-TB | lineage2.2.1 | None | SRR1002689 | MDR-TB | lineage2.2.1 | None | ERR7737845 | MDR-TB | lineage2.2.1 | None | SRR1049969 | Pre-XDR-TB | lineage4.1.3 | None | SRR14807665 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041694 | MDR-TB | lineage2.2.1 | None | ERR11082026 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232714 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049970 | Pre-XDR-TB | lineage4.1.3 | None | ERR144591 | Pre-XDR-TB | lineage2.2.1 | ru | SRR1172711 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797577 | MDR-TB | lineage4.8 | in | SRR5152949 | HR-TB | lineage2.2.1 | None | SRR1049590 | MDR-TB | lineage4.6.1.1 | None | ERR4798515 | Pre-XDR-TB | lineage4.8 | in | ERR4810865 | Pre-XDR-TB | lineage2.2.1 | cn | SRR24710221 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351214 | Pre-XDR-TB | lineage4.2.1 | None | SRR6832824 | MDR-TB | lineage2.2.1 | None | ERR4811323 | XDR-TB | lineage2.2.1 | cn | SRR1173842 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174307 | Pre-XDR-TB | lineage2.2.1 | None | SRR19612378 | MDR-TB | lineage2.2.1 | None | SRR13232493 | Pre-XDR-TB | lineage2.2.1 | None | ERR137202 | Other | lineage4.1.2.1 | ru | ERR133888 | HR-TB | lineage2.2.1 | ru | ERR133900 | Pre-XDR-TB | lineage2.2.1 | ru | ERR133815 | HR-TB | lineage2.2.1 | ru | ERR144542 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2200148 | MDR-TB | lineage2.2.1 | rs | ERR2041706 | MDR-TB | lineage2.2.1 | rs | ERR9119676 | MDR-TB | lineage2.2.1 | None | SRR10397262 | Pre-XDR-TB | lineage2.2.1 | None | ERR13275896 | MDR-TB | lineage2.2.1 | None | SRR13232593 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041703 | MDR-TB | lineage2.2.1 | None | SRR27069398 | MDR-TB | lineage2.2.1.1 | None | SRR13232405 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665656 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173393 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785371 | HR-TB | lineage2.2.1 | None | SRR14807588 | MDR-TB | lineage4.2.1 | None | SRR7652977 | MDR-TB | lineage2.2.1 | None | ERR8665770 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040177 | MDR-TB | lineage2.2.1 | None | SRR25207389 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458443 | Pre-XDR-TB | lineage2.2.1 | None | ERR13273380 | MDR-TB | lineage2.2.1 | None | ERR13275948 | MDR-TB | lineage2.2.1 | None | SRR13232674 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665721 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794515 | MDR-TB | lineage2.2.1 | None | SRR14782317 | HR-TB | lineage4.2.1 | None | ERR13276018 | MDR-TB | lineage2.2.1 | None | SRR25207162 | MDR-TB | lineage2.2.1 | None | ERR13275971 | HR-TB | lineage2.2.1;lineage4.2.2 | None | ERR13260523 | MDR-TB | lineage4.1.2.1 | None | ERR13276026 | MDR-TB | lineage2.2.1 | None | SRR6484938 | HR-TB | lineage2.2.1 | None | ERR8774393 | MDR-TB | lineage4.4.1.1 | None | SRR15368774 | MDR-TB | lineage2.2.1 | None | SRR1173722 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173792 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276007 | HR-TB | lineage2.2.1 | None | SRR22873603 | XDR-TB | lineage2.2.1 | None | ERR8665696 | XDR-TB | lineage2.2.1 | None | SRR6257043 | MDR-TB | lineage2.2.1 | None | SRR1049591 | MDR-TB | lineage4.6.1.1 | None | SRR7652971 | MDR-TB | lineage2.2.1 | None | SRR6832015 | MDR-TB | lineage2.2.1 | None | ERR2307372 | MDR-TB | lineage2.2.1 | None | SRR29289222 | Pre-XDR-TB | lineage3 | None | SRR29289234 | MDR-TB | lineage3 | None | ERR4796609 | Pre-XDR-TB | lineage4.8 | in | ERR4796681 | Pre-XDR-TB | lineage4.8 | in | ERR13276329 | Pre-XDR-TB | lineage2.2.1 | None | SRR22351877 | XDR-TB | lineage2.2.1 | None | SRR22179522 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR13276263 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR18714921 | MDR-TB | lineage2.2.1 | None | SRR21658532 | Other | lineage4.4.1.1 | None | ERR13273248 | MDR-TB | lineage2.2.1 | None | ERR4423711 | MDR-TB | lineage4.4.1.1 | None | SAMN02628498 | Pre-XDR-TB | lineage2.2.1 | ir | ERR4828081 | MDR-TB | lineage2.2.1 | None | ERR2041695 | MDR-TB | lineage2.2.1 | None | ERR8665655 | Pre-XDR-TB | lineage2.2.1 | None | SRR28467039 | MDR-TB | lineage2.2.1.1 | None | ERR4822297 | Pre-XDR-TB | lineage2.2.1 | de | ERR11798563 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR5865941 | MDR-TB | lineage2.2.1 | None | SRR998774 | Pre-XDR-TB | lineage4.1.3 | None | ERR11044220 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232492 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232629 | MDR-TB | lineage2.2.1 | None | SRR5709871 | MDR-TB | lineage2.2.1 | th | SRR6824586 | MDR-TB | lineage2.2.1 | cn | ERR2041716 | MDR-TB | lineage2.2.1 | None | SRR1173446 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865737 | MDR-TB | lineage2.2.1 | None | ERR11488412 | Pre-XDR-TB | lineage4.8 | None | ERR2677442 | Pre-XDR-TB | lineage4.2.2.1 | de | ERR8665720 | Pre-XDR-TB | lineage2.2.1 | None | ERR228043 | MDR-TB | lineage2.2.1 | ru | ERR8665697 | XDR-TB | lineage2.2.1 | None | ERR3794504 | MDR-TB | lineage2.2.1 | None | ERR2516243 | MDR-TB | lineage2.2.1 | be | SRR10303281 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399843 | MDR-TB | lineage2.2.1 | None | ERR11773841 | Pre-XDR-TB | lineage4.2.1 | None | SRR5153618 | MDR-TB | lineage2.2.1 | None | SRR25207199 | MDR-TB | lineage2.2.1 | None | SRR1723776 | MDR-TB | lineage2.2.1 | cn | SRR25206871 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276910 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680025 | MDR-TB | lineage4.1.3 | None | ERR11488642 | Pre-XDR-TB | lineage4.8 | None | SRR6785297 | MDR-TB | lineage2.2.1 | None | SRR998773 | Pre-XDR-TB | lineage4.1.3 | None | SRR29051184 | Other | lineage4.4.1.1 | None | ERR9030268 | MDR-TB | lineage4.8 | None | ERR2041705 | MDR-TB | lineage2.2.1 | None | ERR13276342 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041799 | MDR-TB | lineage2.2.1 | None | SRR5153713 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772547 | MDR-TB | lineage1.1.2 | None | SRR10430358 | Pre-XDR-TB | lineage2.2.1 | None | ERR13273347 | MDR-TB | lineage2.2.1 | None | ERR11488550 | Pre-XDR-TB | lineage4.8 | None | ERR4798290 | Pre-XDR-TB | lineage3 | in | ERR4799283 | Pre-XDR-TB | lineage4.8 | in | ERR4797780 | Pre-XDR-TB | lineage4.8 | in | ERR2041715 | MDR-TB | lineage2.2.1 | None | SAMN02231161 | Pre-XDR-TB | lineage4.1.3 | ml | ERR4831097 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276057 | MDR-TB | lineage2.2.1 | None | ERR8665967 | Pre-XDR-TB | lineage2.2.1 | None |
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