Rv2428 - c.-47_-46insT

Drug resistance types
0 Sensitive 7 RR-TB 32 HR-TB 226 MDR-TB 27 Pre-XDR-TB 3 XDR-TB 1 Other
lineage Counts
lineage Count
lineage4.2.2.2 232
lineage4.4.2 3
lineage1.1.2 3
lineage2.2.1 22
lineage4.5 3
lineage2.2.1.1 5
lineage4.3.3 1
lineage4.1.2 9
lineage4.8 3
lineage4.6.2.2 3
La1.5;lineage4.5 2
lineage4.2.2.2;lineage4.8 1
lineage1.2.2.2 1
lineage4.1.2.1 1
lineage4.2.1 1
lineage4.9 1
lineage4.3.2 1
lineage4.3.4.2 1
lineage4.4.1.1 1
lineage4.2.2 1
lineage2.2.1;lineage2.2.2 1
spoligotype Counts
spoligotype Count
None 296
Geographic prevalence
Country level data for this variant is available for 72 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR278538 MDR-TB lineage4.2.2.2 None
SRR671760 Pre-XDR-TB lineage4.4.2 cn
ERR7737682 MDR-TB lineage4.2.2.2 None
ERR4830824 Pre-XDR-TB lineage4.2.2.2 et
ERR7737858 MDR-TB lineage4.2.2.2 None
ERR4830794 Pre-XDR-TB lineage4.2.2.2 et
ERR4822303 MDR-TB lineage4.2.2.2 de
SRR22251454 HR-TB lineage4.2.2.2 None
ERR6397171 MDR-TB lineage4.2.2.2 None
ERR2517342 MDR-TB lineage4.2.2.2 nl
SRR25827723 XDR-TB lineage1.1.2 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR4011965 MDR-TB lineage4.2.2.2 None
ERR2145520 MDR-TB lineage4.2.2.2 None
SRR21277567 Pre-XDR-TB lineage4.5 None
ERR7737856 MDR-TB lineage4.2.2.2 None
ERR4830785 Pre-XDR-TB lineage4.2.2.2 et
SRR3082080 MDR-TB lineage4.2.2.2 None
SAMN02414896 MDR-TB lineage4.2.2.2 se
ERR3639818 MDR-TB lineage4.2.2.2 None
SAMN03246299 MDR-TB lineage2.2.1 cn
ERR4830787 MDR-TB lineage4.2.2.2 None
ERR2516944 MDR-TB lineage4.2.2.2 gb
ERR4011964 MDR-TB lineage4.2.2.2 None
SRR6045932 MDR-TB lineage4.2.2.2 None
ERR11069129 MDR-TB lineage4.2.2.2 None
ERR11081695 MDR-TB lineage4.2.2.2 None
SRR25389454 Pre-XDR-TB lineage2.2.1.1 None
SRR1163201 MDR-TB lineage4.2.2.2 None
ERR4830796 Pre-XDR-TB lineage4.2.2.2 None
SRR25206898 MDR-TB lineage2.2.1 None
ERR1023410 MDR-TB lineage4.2.2.2 None
SRR3082073 MDR-TB lineage4.2.2.2 None
SRR1146293 MDR-TB lineage4.2.2.2 None
ERR11081050 MDR-TB lineage4.2.2.2 None
ERR270707 HR-TB lineage4.2.2.2 None
ERR4829102 Pre-XDR-TB lineage4.2.2.2 dj
SRR5818638 MDR-TB lineage4.2.2.2 dj
ERR7737819 MDR-TB lineage4.2.2.2 None
ERR7737847 MDR-TB lineage4.2.2.2 None
SRR1146309 MDR-TB lineage4.2.2.2 None
ERR7737777 MDR-TB lineage4.2.2.2 None
ERR2179657 Pre-XDR-TB lineage4.4.2 cn
ERR4830825 MDR-TB lineage4.2.2.2 et
SRR7781506 MDR-TB lineage4.2.2.2 None
ERR4827706 HR-TB lineage4.3.3 None
ERR7737707 MDR-TB lineage4.2.2.2 None
ERR11488682 MDR-TB lineage4.1.2 None
ERR4011952 MDR-TB lineage4.2.2.2 None
ERR7737644 MDR-TB lineage4.2.2.2 None
ERR7737842 MDR-TB lineage4.2.2.2 None
ERR4828993 MDR-TB lineage4.2.2.2 it
DRR474109 HR-TB lineage2.2.1.1 None
ERR7737817 MDR-TB lineage4.2.2.2 None
ERR11044060 MDR-TB lineage4.2.2.2 None
ERR4830784 MDR-TB lineage4.2.2.2 et
ERR6397151 MDR-TB lineage4.2.2.2 None
SRR21690975 MDR-TB lineage4.2.2.2 None
SRR3082099 MDR-TB lineage4.8 None
ERR2446468 MDR-TB lineage4.2.2.2 nl
ERR7737727 MDR-TB lineage4.2.2.2 None
SRR6046111 HR-TB lineage4.2.2.2 gb
ERR1023412 MDR-TB lineage4.2.2.2 None
SRR1723550 MDR-TB lineage2.2.1 None
ERR7737745 MDR-TB lineage4.2.2.2 None
SAMN02414930 MDR-TB lineage4.2.2.2 se
ERR7737864 MDR-TB lineage4.2.2.2 None
ERR11488446 MDR-TB lineage4.1.2 None
SRR1144808 MDR-TB lineage4.2.2.2 None
ERR4423631 RR-TB lineage4.6.2.2 None
SRR1144758 MDR-TB lineage4.2.2.2 None
ERR1035155 MDR-TB lineage4.2.2.2 sa
ERR7737855 MDR-TB lineage4.2.2.2 None
SRR1162986 MDR-TB lineage4.2.2.2 None
SRR1163085 MDR-TB lineage4.2.2.2 None
SAMN02414873 MDR-TB lineage4.2.2.2 se
SAMN02414876 MDR-TB lineage4.2.2.2 se
ERR11044337 HR-TB lineage4.2.2.2 None
ERR11488839 MDR-TB lineage4.1.2 None
SRR6045244 MDR-TB lineage4.2.2.2 None
SRR1144784 MDR-TB lineage4.2.2.2 None
ERR11044024 MDR-TB lineage4.2.2.2 None
ERR7737942 MDR-TB lineage4.2.2.2 None
SRR1163014 MDR-TB lineage4.2.2.2 None
ERR7737840 MDR-TB lineage4.2.2.2 None
ERR11488495 MDR-TB lineage4.1.2 None
ERR4011953 MDR-TB lineage4.2.2.2 None
ERR4830839 MDR-TB lineage4.2.2.2 et
SRR1144760 MDR-TB lineage4.2.2.2 None
SRR1163123 MDR-TB lineage4.2.2.2 None
SRR6930888 RR-TB lineage2.2.1 None
ERR4276870 MDR-TB lineage4.2.2.2 None
SRR1163142 MDR-TB lineage4.2.2.2 None
ERR7737896 MDR-TB lineage4.2.2.2 None
SRR1162879 MDR-TB lineage4.2.2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
ERR4830828 Pre-XDR-TB lineage4.2.2.2 et
ERR1023318 HR-TB lineage4.2.2.2 None
ERR270778 HR-TB lineage4.2.2.2 None
SRR1163128 MDR-TB lineage4.2.2.2 None
ERR7737685 MDR-TB lineage4.2.2.2 None
ERR386897 MDR-TB lineage4.2.2.2 None
SRR1146330 MDR-TB lineage4.2.2.2 None
SRR1723994 Pre-XDR-TB lineage4.4.2 cn
ERR6397199 MDR-TB lineage4.2.2.2 None
ERR4830792 MDR-TB lineage4.2.2.2 et
SRR6824403 MDR-TB lineage2.2.1 cn
SRR1146301 MDR-TB lineage4.2.2.2 None
ERR4830834 MDR-TB lineage4.2.2.2 None
SRR1144785 MDR-TB lineage4.2.2.2 None
ERR7737675 MDR-TB lineage4.2.2.2 None
SRR1146289 MDR-TB lineage4.2.2.2 None
ERR11488659 MDR-TB lineage4.1.2 None
ERR7737905 MDR-TB lineage4.2.2.2 None
SRR15315794 HR-TB La1.5;lineage4.5 None
ERR7737662 MDR-TB lineage4.2.2.2 None
SRR21690946 MDR-TB lineage4.2.2.2 None
ERR11049567 MDR-TB lineage4.2.2.2 None
SAMN02414977 MDR-TB lineage4.2.2.2 se
SRR1723538 MDR-TB lineage2.2.1 cn
ERR11080920 MDR-TB lineage4.2.2.2 None
SRR5818595 MDR-TB lineage4.2.2.2 dj
ERR4011962 MDR-TB lineage4.2.2.2 None
ERR7737670 MDR-TB lineage4.2.2.2 None
ERR11043787 MDR-TB lineage4.2.2.2 None
SRR10305980 MDR-TB lineage2.2.1 None
ERR4011951 MDR-TB lineage4.2.2.2 None
ERR403414 HR-TB lineage4.2.2.2 None
ERR4830826 HR-TB lineage4.2.2.2;lineage4.8 et
ERR4828843 MDR-TB lineage4.2.2.2 None
ERR11488448 HR-TB lineage4.1.2 None
ERR4423632 RR-TB lineage4.6.2.2 None
ERR7737776 MDR-TB lineage4.2.2.2 None
SRR28044449 Pre-XDR-TB lineage1.2.2.2 None
ERR7737906 MDR-TB lineage4.2.2.2 None
ERR4828989 MDR-TB lineage4.2.2.2 it
SRR1723792 MDR-TB lineage2.2.1 cn
SRR2469380 HR-TB lineage4.2.2.2 None
ERR3275847 MDR-TB lineage4.2.2.2 nl
SRR6045841 HR-TB lineage4.2.2.2 gb
ERR1200620 MDR-TB lineage4.2.2.2 et
SRR10809029 HR-TB lineage4.1.2.1 None
ERR3275727 MDR-TB lineage4.2.2.2 nl
ERR4828871 MDR-TB lineage4.2.2.2 None
SRR6824435 MDR-TB lineage2.2.1.1 cn
SRR1163093 MDR-TB lineage4.2.2.2 None
ERR114495 HR-TB lineage4.2.2.2 None
ERR266608 HR-TB lineage4.2.2.2 None
ERR7737645 MDR-TB lineage4.2.2.2 None
ERR11044157 MDR-TB lineage4.2.2.2 None
ERR2517069 MDR-TB lineage4.2.2.2 gb
SRR3085334 MDR-TB lineage4.2.2.2 None
ERR4830829 MDR-TB lineage4.2.2.2 et
ERR4831178 HR-TB lineage4.2.2.2 de
SRR1162874 MDR-TB lineage4.2.2.2 None
ERR4830813 MDR-TB lineage4.2.2.2 et
ERR4827531 RR-TB lineage4.2.1 None
ERR6397154 MDR-TB lineage4.2.2.2 None
SRR1166925 MDR-TB lineage4.2.2.2 None
SRR5535830 MDR-TB lineage4.6.2.2 None
ERR11043466 MDR-TB lineage4.8 None
ERR4830797 MDR-TB lineage4.2.2.2 et
ERR2497879 MDR-TB lineage4.9 None
ERR4830798 MDR-TB lineage4.2.2.2 et
ERR4830793 MDR-TB lineage4.2.2.2 et
ERR7737641 MDR-TB lineage4.2.2.2 None
ERR4830831 Pre-XDR-TB lineage4.2.2.2 et
ERR4830782 MDR-TB lineage4.2.2.2 et
ERR11489033 MDR-TB lineage4.1.2 None
SRR1163208 MDR-TB lineage4.2.2.2 None
ERR4813835 Pre-XDR-TB lineage4.3.2 None
ERR3275476 MDR-TB lineage4.2.2.2 nl
ERR2677447 MDR-TB lineage4.2.2.2 de
SRR12420431 MDR-TB lineage2.2.1 None
ERR270713 HR-TB lineage4.2.2.2 None
SRR25827593 XDR-TB lineage1.1.2 None
SRR1163413 MDR-TB lineage4.2.2.2 None
ERR7732707 MDR-TB lineage4.2.2.2 None
ERR4828868 MDR-TB lineage4.2.2.2 None
ERR7737720 MDR-TB lineage4.2.2.2 None
ERR4830809 Pre-XDR-TB lineage4.2.2.2 None
ERR4011968 MDR-TB lineage4.2.2.2 None
ERR2517379 MDR-TB lineage4.2.2.2 nl
ERR11081701 MDR-TB lineage4.2.2.2 None
ERR7737806 MDR-TB lineage4.2.2.2 None
SRR1163179 MDR-TB lineage4.2.2.2 None
ERR4830820 MDR-TB lineage4.2.2.2 et
ERR7737937 MDR-TB lineage4.2.2.2 None
ERR7737851 MDR-TB lineage4.2.2.2 None
ERR11067246 MDR-TB lineage4.2.2.2 None
SRR6930885 MDR-TB lineage2.2.1 None
ERR4822497 MDR-TB lineage4.2.2.2 de
ERR7737871 MDR-TB lineage4.2.2.2 None
SRR3142013 MDR-TB lineage4.2.2.2 None
SRR21689464 Pre-XDR-TB lineage4.2.2.2 None
SRR6045277 HR-TB lineage4.2.2.2 None
ERR11069128 MDR-TB lineage4.2.2.2 None
ERR4276911 MDR-TB lineage4.2.2.2 None
SRR15316025 Pre-XDR-TB lineage4.5 None
SRR1162800 MDR-TB lineage4.2.2.2 None
ERR7737926 MDR-TB lineage4.2.2.2 None
ERR2446297 MDR-TB lineage4.2.2.2 nl
SRR22251828 MDR-TB lineage4.2.2.2 None
ERR4831209 HR-TB lineage4.2.2.2 de
ERR4830821 Pre-XDR-TB lineage4.2.2.2 et
ERR3275716 MDR-TB lineage4.2.2.2 nl
ERR7737756 MDR-TB lineage4.2.2.2 None
ERR4553743 RR-TB lineage4.8 None
SRR21277255 HR-TB La1.5;lineage4.5 None
ERR7732708 MDR-TB lineage4.2.2.2 None
ERR4011969 MDR-TB lineage4.2.2.2 None
SRR1165372 MDR-TB lineage4.2.2.2 None
SRR1162796 MDR-TB lineage4.2.2.2 None
SRR22249514 Other lineage2.2.1 None
SRR12420444 RR-TB lineage2.2.1 None
ERR11050152 MDR-TB lineage4.2.2.2 None
ERR4831240 MDR-TB lineage4.2.2.2 de
ERR4011963 MDR-TB lineage4.2.2.2 None
ERR11488433 MDR-TB lineage4.1.2 None
ERR7737680 MDR-TB lineage4.2.2.2 None
ERR4011973 MDR-TB lineage4.2.2.2 None
ERR4011960 MDR-TB lineage4.2.2.2 None
SAMN02414887 MDR-TB lineage4.2.2.2 se
ERR11081528 MDR-TB lineage4.2.2.2 None
SRR1144833 MDR-TB lineage4.2.2.2 None
ERR4828996 MDR-TB lineage4.2.2.2 None
ERR3275385 MDR-TB lineage4.2.2.2 nl
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1144814 MDR-TB lineage4.2.2.2 None
SRR25827591 XDR-TB lineage1.1.2 None
ERR7737947 MDR-TB lineage4.2.2.2 None
ERR2516914 MDR-TB lineage4.2.2.2 gb
SRR6930924 Pre-XDR-TB lineage4.3.4.2 None
ERR233350 MDR-TB lineage4.2.2.2 et
ERR11043936 MDR-TB lineage4.2.2.2 None
DRR473806 HR-TB lineage2.2.1.1 None
SAMN02414962 MDR-TB lineage4.2.2.2 se
DRR474198 HR-TB lineage2.2.1.1 None
SRR1166876 MDR-TB lineage4.2.2.2 None
ERR7737836 MDR-TB lineage4.2.2.2 None
ERR4831239 MDR-TB lineage4.2.2.2 None
SRR3085331 MDR-TB lineage4.2.2.2 None
ERR4011974 MDR-TB lineage4.2.2.2 None
ERR7737882 MDR-TB lineage4.2.2.2 None
ERR11044333 MDR-TB lineage4.2.2.2 None
SRR2100878 HR-TB lineage4.2.2.2 None
ERR4829004 MDR-TB lineage4.2.2.2 it
SRR12420297 HR-TB lineage2.2.1 None
SRR18213722 HR-TB lineage4.2.2.2 None
ERR11042995 MDR-TB lineage4.2.2.2 None
ERR11488454 MDR-TB lineage4.1.2 None
ERR6397213 MDR-TB lineage4.2.2.2 None
ERR2653195 Pre-XDR-TB lineage4.4.1.1 None
SRR15316421 MDR-TB lineage4.2.2 None
SRR5818581 MDR-TB lineage4.2.2.2 dj
ERR11082116 MDR-TB lineage4.2.2.2 None
ERR7737868 MDR-TB lineage4.2.2.2 None
ERR4011954 MDR-TB lineage4.2.2.2 None
ERR2516962 MDR-TB lineage4.2.2.2 gb
SRR21576579 MDR-TB lineage2.2.1 None
ERR7737919 MDR-TB lineage4.2.2.2 None
ERR7737772 MDR-TB lineage4.2.2.2 None
ERR11044335 HR-TB lineage4.2.2.2 None
ERR4011966 Pre-XDR-TB lineage4.2.2.2 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4830789 Pre-XDR-TB lineage4.2.2.2 et
ERR7737739 MDR-TB lineage4.2.2.2 None
ERR7737656 MDR-TB lineage4.2.2.2 None
ERR11044007 MDR-TB lineage4.2.2.2 None
ERR4830638 MDR-TB lineage2.2.1 tm
SRR1167061 MDR-TB lineage4.2.2.2 None
SRR1167131 MDR-TB lineage4.2.2.2 None
SRR2100925 MDR-TB lineage4.2.2.2 None
SRR1165432 MDR-TB lineage4.2.2.2 None
ERR7737722 MDR-TB lineage4.2.2.2 None
ERR7737647 MDR-TB lineage4.2.2.2 None
ERR8975137 HR-TB lineage4.2.2.2 None
SRR2100342 HR-TB lineage4.2.2.2 None
SRR5818577 MDR-TB lineage4.2.2.2 dj
ERR7737890 MDR-TB lineage4.2.2.2 None
ERR4830840 MDR-TB lineage4.2.2.2 et
ERR11044613 MDR-TB lineage4.2.2.2 None
SRR21674620 MDR-TB lineage4.2.2.2 None
SRR10305996 MDR-TB lineage2.2.1 None
ERR11082240 MDR-TB lineage4.2.2.2 None
SRR1162968 MDR-TB lineage4.2.2.2 None
ERR4830838 Pre-XDR-TB lineage4.2.2.2 et
SRR1723551 MDR-TB lineage2.2.1 None
SRR12420418 RR-TB lineage2.2.1 None
ERR11044055 MDR-TB lineage4.2.2.2 None
ERR4831241 MDR-TB lineage4.2.2.2 de
SRR6824366 Pre-XDR-TB lineage4.5 cn
SRR6824694 MDR-TB lineage2.2.1 cn
SRR1146320 MDR-TB lineage4.2.2.2 None
SRR2100823 HR-TB lineage4.2.2.2 None
ERR11080856 MDR-TB lineage4.2.2.2 None