lineage | Count |
---|---|
lineage2.2.1 | 21 |
lineage1.2.2.2 | 2 |
lineage2.2.1.1 | 25 |
lineage1.1.1.1 | 1 |
lineage2.2.1.2 | 2 |
lineage4.8 | 1 |
lineage4.3.4.1 | 7 |
lineage4.2.1 | 1 |
lineage4.1.2 | 1 |
lineage5.2 | 1 |
lineage1.1.1 | 1 |
lineage2.2 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 65 |
ID | Drug resistance | Lineage | Country iso2 | SRR24256246 | Pre-XDR-TB | lineage2.2.1 | None | SRR25340907 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR6824313 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR22250097 | HR-TB | lineage1.1.1.1 | None | SRR1723683 | MDR-TB | lineage2.2.1.1 | cn | SRR1723684 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1723685 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1723686 | MDR-TB | lineage2.2.1.1 | cn | SRR1723687 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR5709935 | Pre-XDR-TB | lineage2.2.1 | th | SRR6824308 | MDR-TB | lineage2.2.1.1 | cn | SRR6824305 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR25207209 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1723688 | Pre-XDR-TB | lineage2.2.1.1 | cn | SAMEA2534642 | Pre-XDR-TB | lineage2.2.1 | ru | SRR671815 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824314 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR6824418 | MDR-TB | lineage2.2.1.1 | cn | SRR6824316 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR6824315 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR960987 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR960989 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR4798268 | Pre-XDR-TB | lineage2.2.1 | in | ERR1035107 | Pre-XDR-TB | lineage2.2.1 | vn | ERR2229439 | Other | lineage4.8 | None | SRR5153328 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024912 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR2024943 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR2653226 | MDR-TB | lineage4.3.4.1 | None | SRR23311011 | Pre-XDR-TB | lineage4.2.1 | None | ERR137204 | Pre-XDR-TB | lineage2.2.1 | ru | SRR3742668 | Pre-XDR-TB | lineage2.2.1 | None | SRR4035713 | Other | lineage4.1.2 | None | SRR2024991 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR2706950 | MDR-TB | lineage5.2 | cd | ERR4797908 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811370 | Pre-XDR-TB | lineage2.2.1.2 | cn | ERR4797378 | XDR-TB | lineage2.2.1.1 | in | SRR7517694 | MDR-TB | lineage2.2.1 | None | ERR3287381 | Pre-XDR-TB | lineage2.2.1 | pe | SRR7517817 | MDR-TB | lineage2.2.1 | None | DRR130088 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130089 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130090 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130187 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130087 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR11662202 | MDR-TB | lineage1.1.1 | None | ERR5865320 | Pre-XDR-TB | lineage2.2 | None | DRR130188 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088571 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865319 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865321 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865318 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774579 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305958 | MDR-TB | lineage2.2.1.1 | None | SRR10305959 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10305960 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1367225 | Pre-XDR-TB | lineage2.2.1 | None | SRR25340814 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR20632805 | MDR-TB | lineage2.2.1.1 | None | SRR20632821 | MDR-TB | lineage2.2.1.1 | None | ERR5758326 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389453 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11081245 | MDR-TB | lineage2.2.1 | None |
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