Rv2681 - c.1206C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
170 Sensitive
2 RR-TB
29 HR-TB
34 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.3 | 254 |
| lineage1.1.2;lineage1.1.3.3 | 6 |
| lineage1.1.3.3;lineage2.2.1 | 2 |
| lineage1.1.1;lineage1.1.3.3 | 1 |
| lineage1.1.3.3;lineage4 | 3 |
| lineage4 | 1 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 269 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21727899 | Sensitive | lineage1.1.3.3 | None | ERR11082711 | Sensitive | lineage1.1.3.3 | None | SRR29016877 | MDR-TB | lineage1.1.3.3 | None | SRR29017100 | Pre-XDR-TB | lineage1.1.3.3 | None | SRR29017182 | Pre-XDR-TB | lineage1.1.3.3 | None | SRR29440701 | Sensitive | lineage1.1.3.3 | None | SRR21691022 | Sensitive | lineage1.1.3.3 | None | SRR29440716 | HR-TB | lineage1.1.3.3 | None | SRR28868682 | Other | lineage1.1.3.3 | None | SRR30182369 | Sensitive | lineage1.1.3.3 | None | ERR13266045 | HR-TB | lineage1.1.3.3 | None | SRR23316628 | HR-TB | lineage1.1.3.3 | None | SRR23316619 | HR-TB | lineage1.1.3.3 | None | SRR29231221 | Sensitive | lineage1.1.3.3 | None | SRR23316590 | HR-TB | lineage1.1.3.3 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR12882722 | Sensitive | lineage1.1.3.3 | None | ERR13260932 | Sensitive | lineage1.1.3.3 | None | ERR11082150 | HR-TB | lineage1.1.3.3 | None | SRR24799239 | Sensitive | lineage1.1.3.3 | None | ERR10465826 | Sensitive | lineage1.1.3.3 | None | ERR4553644 | RR-TB | lineage1.1.3.3 | None | SRR21733103 | Sensitive | lineage1.1.3.3 | None | SRR3724968 | Sensitive | lineage1.1.3.3 | None | SRR29096207 | Sensitive | lineage1.1.3.3 | None | ERR13261225 | Sensitive | lineage1.1.3.3 | None | SRR25827621 | MDR-TB | lineage1.1.3.3 | None | SRR26112640 | Sensitive | lineage1.1.3.3 | None | SRR11662225 | MDR-TB | lineage1.1.3.3 | None | ERR13261113 | Sensitive | lineage1.1.3.3 | None | SRR22251923 | Sensitive | lineage1.1.3.3 | None | ERR4816357 | Sensitive | lineage1.1.3.3 | None | SRR14520115 | Sensitive | lineage1.1.3.3 | None | SRR23316608 | HR-TB | lineage1.1.3.3 | None | SRR29016857 | MDR-TB | lineage1.1.3.3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR10185942 | MDR-TB | lineage1.1.3.3 | None | SRR6650277 | Sensitive | lineage1.1.3.3 | None | SRR27449985 | HR-TB | lineage1.1.3.3 | None | SRR7070066 | HR-TB | lineage1.1.3.3 | None | ERR230046 | Sensitive | lineage1.1.3.3 | None | SRR29017030 | MDR-TB | lineage1.1.3.3 | None | SRR6650202 | Sensitive | lineage1.1.2;lineage1.1.3.3 | None | SRR11662691 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1 | None | SRR7069742 | HR-TB | lineage1.1.3.3 | None | ERR4553411 | MDR-TB | lineage1.1.3.3 | None | SRR18213768 | Sensitive | lineage1.1.3.3 | None | SRR29440838 | Sensitive | lineage1.1.3.3 | None | ERR16022309 | MDR-TB | lineage1.1.3.3 | None | SRR26112108 | Sensitive | lineage1.1.3.3 | None | ERR2510700 | Pre-XDR-TB | lineage1.1.3.3 | pk | ERR16022320 | MDR-TB | lineage1.1.3.3 | None | ERR16022321 | MDR-TB | lineage1.1.3.3 | None | ERR1367616 | Sensitive | lineage1.1.3.3 | None | SRR6650419 | Sensitive | lineage1.1.3.3 | None | ERR4798599 | HR-TB | lineage1.1.3.3 | in | ERR4797433 | Sensitive | lineage1.1.3.3 | in | ERR4799662 | Sensitive | lineage1.1.3.3 | in | ERR4799664 | Sensitive | lineage1.1.3.3 | in | SRR6797520 | Sensitive | lineage1.1.3.3 | None | ERR4796446 | Sensitive | lineage1.1.3.3 | in | ERR4796422 | Sensitive | lineage1.1.3.3 | in | ERR4800214 | HR-TB | lineage1.1.3.3 | in | ERR751994 | Sensitive | lineage1.1.3.3 | th | ERR751653 | Sensitive | lineage1.1.3.3 | th | ERR752178 | Sensitive | lineage1.1.1;lineage1.1.3.3 | th | SRR6797689 | Sensitive | lineage1.1.3.3 | None | ERR718370 | Sensitive | lineage1.1.3.3 | th | ERR775754 | Sensitive | lineage1.1.3.3 | th | SRR28045652 | MDR-TB | lineage1.1.3.3 | None | ERR751754 | Sensitive | lineage1.1.3.3 | th | SRR28046099 | Sensitive | lineage1.1.3.3 | None | ERR718562 | Other | lineage1.1.3.3 | th | SRR1180320 | Sensitive | lineage1.1.2;lineage1.1.3.3 | None | ERR775765 | Sensitive | lineage1.1.3.3 | th | SRR28859920 | Sensitive | lineage1.1.3.3 | None | SRR28046129 | RR-TB | lineage1.1.3.3 | None | SRR28046276 | Sensitive | lineage1.1.3.3 | None | SRR28044652 | Sensitive | lineage1.1.3.3 | None | ERR7902652 | Sensitive | lineage1.1.3.3 | None | SRR6797824 | Sensitive | lineage1.1.3.3 | None | ERR4817033 | HR-TB | lineage1.1.3.3 | None | SRR10185951 | MDR-TB | lineage1.1.3.3 | None | ERR551084 | Sensitive | lineage1.1.3.3 | de | ERR552137 | Other | lineage1.1.3.3 | de | ERR4816008 | Sensitive | lineage1.1.3.3 | gb | ERR4817080 | Sensitive | lineage1.1.3.3 | gb | ERR4819717 | Sensitive | lineage1.1.3.3 | gb | ERR4820336 | Sensitive | lineage1.1.3.3 | gb | ERR4820445 | Sensitive | lineage1.1.3.3 | gb | ERR4820593 | Sensitive | lineage1.1.3.3 | gb | ERR4821182 | HR-TB | lineage1.1.3.3 | gb | ERR4821700 | Sensitive | lineage1.1.3.3 | gb | ERR4822079 | Sensitive | lineage1.1.3.3 | gb | ERR4822210 | Sensitive | lineage1.1.3.3 | gb | ERR2513144 | Sensitive | lineage1.1.3.3 | gb | ERR2513287 | Sensitive | lineage1.1.3.3 | gb | ERR2513557 | Sensitive | lineage1.1.3.3;lineage4 | gb | ERR2514053 | HR-TB | lineage1.1.3.3 | gb | ERR2514701 | Sensitive | lineage1.1.3.3 | gb | SRR7517784 | Other | lineage1.1.3.3 | None | SRR6650376 | Sensitive | lineage1.1.3.3 | None | SRR6797309 | Sensitive | lineage1.1.3.3 | None | ERR7902649 | Sensitive | lineage1.1.3.3 | None | SRR26112483 | Sensitive | lineage1.1.3.3 | None | ERR4818379 | Sensitive | lineage1.1.3.3 | None | ERR13289856 | Other | lineage1.1.3.3 | None | SRR21733208 | Sensitive | lineage1.1.3.3 | None | SRR28044559 | Sensitive | lineage1.1.3.3 | None | SRR6797802 | Sensitive | lineage1.1.3.3 | None | SRR21690422 | Sensitive | lineage1.1.3.3 | None | ERR4553605 | MDR-TB | lineage1.1.3.3 | None | SRR21732622 | Sensitive | lineage1.1.3.3 | None | SRR22250141 | Other | lineage1.1.3.3 | None | ERR4814770 | Sensitive | lineage1.1.3.3 | None | ERR4797194 | HR-TB | lineage1.1.3.3 | in | ERR4553510 | MDR-TB | lineage4 | None | SRR21733052 | Sensitive | lineage1.1.3.3 | None | SRR25827629 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1;lineage3 | None | ERR13292256 | Sensitive | lineage1.1.3.3 | None | ERR13292257 | Sensitive | lineage1.1.3.3 | None | ERR9657184 | Sensitive | lineage1.1.3.3 | None | SRR28046323 | Sensitive | lineage1.1.3.3 | None | SRR21690386 | HR-TB | lineage1.1.3.3 | None | SRR22250035 | Sensitive | lineage1.1.3.3 | None | SRR18911135 | Sensitive | lineage1.1.3.3 | None | SRR18911136 | Sensitive | lineage1.1.3.3 | None | SRR18911558 | Sensitive | lineage1.1.3.3 | None | SRR29017630 | MDR-TB | lineage1.1.3.3;lineage4 | None | SRR21689679 | Sensitive | lineage1.1.3.3 | None | SRR21732862 | Sensitive | lineage1.1.3.3 | None | SRR29055379 | Sensitive | lineage1.1.3.3 | None | SRR29096913 | Other | lineage1.1.3.3 | None | ERR2446504 | Sensitive | lineage1.1.3.3 | nl | ERR3275371 | Sensitive | lineage1.1.3.3 | nl | SRR29096899 | Sensitive | lineage1.1.3.3 | None | ERR3276009 | Sensitive | lineage1.1.3.3 | nl | SRR28044984 | Other | lineage1.1.3.3 | None | SRR28045570 | Sensitive | lineage1.1.3.3 | None | SRR25827554 | Sensitive | lineage1.1.3.3 | None | ERR4817148 | Other | lineage1.1.3.3 | None | SRR22251973 | Sensitive | lineage1.1.3.3 | None | SRR21732060 | HR-TB | lineage1.1.3.3 | None | SRR29096437 | Sensitive | lineage1.1.3.3 | None | ERR4819287 | Other | lineage1.1.3.3 | None | SRR6797462 | Sensitive | lineage1.1.3.3 | None | SRR29096463 | Sensitive | lineage1.1.3.3 | None | SRR22251236 | Sensitive | lineage1.1.3.3 | None | ERR4553504 | MDR-TB | None | ERR13267051 | Sensitive | lineage1.1.3.3 | None | SRR29017444 | MDR-TB | lineage1.1.3.3;lineage4 | None | SRR11662400 | MDR-TB | lineage1.1.3.3 | None | SRR28044564 | Sensitive | lineage1.1.3.3 | None | SRR29906778 | Sensitive | lineage1.1.3.3 | None | SRR29096967 | HR-TB | lineage1.1.3.3 | None | SRR6797453 | HR-TB | lineage1.1.3.3 | None | SRR11662180 | MDR-TB | lineage1.1.3.3 | None | SRR15522852 | Sensitive | lineage1.1.3.3 | None | SRR29441022 | HR-TB | lineage1.1.3.3 | None | ERR4553614 | MDR-TB | lineage1.1.3.3 | None | ERR13285595 | HR-TB | lineage1.1.3.3 | None | SRR29772579 | MDR-TB | lineage1.1.3.3 | None | ERR2512769 | Sensitive | lineage1.1.3.3 | None | SRR11662249 | MDR-TB | lineage1.1.3.3 | None | SRR25827415 | Sensitive | lineage1.1.3.3 | None | SRR11662582 | MDR-TB | lineage1.1.3.3 | None | SRR29096249 | Sensitive | lineage1.1.3.3 | None | SRR1172107 | Sensitive | lineage1.1.2;lineage1.1.3.3 | None | SRR6650157 | Sensitive | lineage1.1.3.3 | None | SRR22251987 | Other | lineage1.1.3.3 | None | SRR29096134 | Sensitive | lineage1.1.3.3 | None | SRR30182325 | Sensitive | lineage1.1.3.3 | None | SRR29096720 | HR-TB | lineage1.1.3.3 | None | SRR26112169 | Sensitive | lineage1.1.3.3 | None | SRR22249724 | Sensitive | lineage1.1.3.3 | None | SRR21733037 | HR-TB | lineage1.1.3.3 | None | SRR29096397 | Sensitive | lineage1.1.2;lineage1.1.3.3 | None | SRR11662484 | MDR-TB | lineage1.1.3.3 | None | SRR26112204 | Sensitive | lineage1.1.3.3 | None | ERR4820799 | Sensitive | lineage1.1.3.3 | None | SRR29096919 | Sensitive | lineage1.1.3.3 | None | ERR4799319 | Sensitive | lineage1.1.3.3 | None | ERR4553740 | MDR-TB | lineage1.1.3.3 | None | ERR9117801 | Sensitive | lineage1.1.3.3 | None | SRR30182464 | Sensitive | lineage1.1.3.3 | None | SRR29341481 | Sensitive | lineage1.1.3.3 | None | ERR13265870 | Sensitive | lineage1.1.3.3 | None | ERR16022272 | MDR-TB | lineage1.1.3.3 | None | ERR16022294 | MDR-TB | lineage1.1.3.3 | None | ERR15686450 | HR-TB | lineage1.1.3.3 | None | SRR29231597 | Sensitive | lineage1.1.3.3 | None | SRR28045237 | Sensitive | lineage1.1.3.3 | None | SRR29096755 | HR-TB | lineage1.1.3.3 | None | SRR6964589 | Sensitive | lineage1.1.3.3 | None | ERR13265910 | Sensitive | lineage1.1.3.3;lineage2.2.1 | None | ERR4796958 | Other | lineage1.1.3.3 | in | ERR4798751 | Sensitive | lineage1.1.3.3 | in | ERR4797125 | Sensitive | lineage1.1.3.3 | in | SRR6650407 | Sensitive | lineage1.1.3.3 | None | ERR4797446 | Sensitive | lineage1.1.3.3 | in | ERR4800325 | Sensitive | lineage1.1.3.3 | in | ERR4797267 | Sensitive | lineage1.1.3.3 | in | ERR4799757 | Pre-XDR-TB | lineage1.1.3.3 | in | ERR4800037 | Sensitive | lineage1.1.3.3 | in | ERR4799031 | MDR-TB | lineage1.1.3.3 | in | ERR4797950 | Sensitive | lineage1.1.3.3 | in | ERR4800495 | Other | lineage1.1.3.3 | in | SRR6650274 | Sensitive | lineage1.1.3.3 | None | ERR4798172 | Sensitive | lineage1.1.3.3 | in | SRR29096104 | Sensitive | lineage1.1.3.3 | None | ERR13266643 | Other | lineage1.1.3.3 | None | SRR21732801 | Sensitive | lineage1.1.3.3 | None | ERR4820070 | Sensitive | lineage1.1.3.3 | None | SAMN02599047 | Sensitive | lineage1.1.2;lineage1.1.3.3 | in | SRR14270080 | MDR-TB | lineage1.1.3.3 | None | SRR7070316 | Sensitive | lineage1.1.3.3 | None | ERR751849 | Sensitive | lineage1.1.3.3 | th | ERR752098 | Sensitive | lineage1.1.3.3 | th | ERR751688 | Sensitive | lineage1.1.3.3 | th | ERR751907 | Other | lineage1.1.3.3 | th | SRR28046320 | Other | lineage1.1.3.3 | None | ERR752290 | Sensitive | lineage1.1.3.3 | th | SRR28044990 | Sensitive | lineage1.1.3.3 | None | ERR752093 | Sensitive | lineage1.1.3.3 | th | SRR28044749 | Sensitive | lineage1.1.3.3 | None | SRR28046195 | Sensitive | lineage1.1.3.3 | None | ERR775795 | MDR-TB | lineage1.1.3.3 | th | ERR751669 | Sensitive | lineage1.1.3.3 | th | SRR28046317 | Sensitive | lineage1.1.3.3 | None | ERR752022 | Sensitive | lineage1.1.3.3 | th | SRR28045824 | Sensitive | lineage1.1.3.3 | None | SRR28046324 | Sensitive | lineage1.1.3.3 | None | SRR6797510 | Sensitive | lineage1.1.3.3 | None | SRR28046279 | Other | lineage1.1.3.3 | None | SRR28046082 | Sensitive | lineage1.1.3.3 | None | SRR28046326 | MDR-TB | lineage1.1.3.3 | None | SRR1169513 | Sensitive | lineage1.1.2;lineage1.1.3.3 | None | SRR6797306 | Other | lineage1.1.3.3 | None | SRR28046339 | Other | lineage1.1.3.3 | None | SRR6797659 | Other | lineage1.1.3.3 | None | ERR551632 | HR-TB | lineage1.1.3.3 | de | SRR2100418 | Sensitive | lineage1.1.3.3 | None | SRR2100461 | Sensitive | lineage1.1.3.3 | None | SRR2100671 | Sensitive | lineage1.1.3.3 | None | ERR718343 | Sensitive | lineage1.1.3.3 | th | ERR4814907 | Other | lineage1.1.3.3 | gb | ERR4814958 | Sensitive | lineage1.1.3.3 | gb | ERR4816356 | Sensitive | lineage1.1.3.3 | gb | ERR2512678 | Sensitive | lineage1.1.3.3 | gb | SRR5709920 | MDR-TB | lineage1.1.3.3 | th | SRR5709968 | MDR-TB | lineage1.1.3.3 | th | SRR29096803 | Sensitive | lineage1.1.3.3 | None | SRR11662491 | MDR-TB | lineage1.1.3.3 | None | SRR6442531 | Other | lineage1.1.3.3 | None | SRR6797361 | Sensitive | lineage1.1.3.3 | None | SRR29096713 | Other | lineage1.1.3.3 | None | ERR13260922 | Sensitive | lineage1.1.3.3 | None | SRR7517747 | HR-TB | lineage1.1.3.3 | ch | ERR387044 | Sensitive | lineage1.1.3.3 | None | SRR11662612 | Pre-XDR-TB | lineage1.1.3.3 | None | ERR2517197 | Sensitive | lineage1.1.3.3 | nl | SRR7585396 | Sensitive | lineage1.1.3.3 | in | SRR28045166 | Other | lineage1.1.3.3 | None | SRR6797574 | Sensitive | lineage1.1.3.3 | None | SRR27450389 | Sensitive | lineage1.1.3.3 | None | ERR13292302 | Sensitive | lineage1.1.3.3 | None | ERR1367624 | Sensitive | lineage1.1.3.3 | None | SRR26056468 | HR-TB | lineage1.1.3.3 | None | ERR4817751 | Other | lineage1.1.3.3 | None |
|---|
