Rv2754c - c.660C>T


Drug resistance types
54 Sensitive 9 RR-TB 11 HR-TB 54 MDR-TB 88 Pre-XDR-TB 1 XDR-TB 7 Other
lineage Counts
lineage Count
lineage2.2.1 221
lineage2.2.1;lineage4.5 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
1
spoligotype Counts
spoligotype Count
None 224
Geographic prevalence
Country level data for this variant is available for 32 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12420511 Sensitive lineage2.2.1 None
SRR22137479 Pre-XDR-TB lineage2.2.1 None
SRR22137453 Pre-XDR-TB lineage2.2.1 None
SRR22137427 Pre-XDR-TB lineage2.2.1 None
SRR12420351 Sensitive lineage2.2.1 None
SRR22137461 Pre-XDR-TB lineage2.2.1 None
SRR12420767 Sensitive lineage2.2.1 None
SRR26112776 Pre-XDR-TB lineage2.2.1 None
SRR12420305 RR-TB lineage2.2.1 None
ERR4830902 Pre-XDR-TB lineage2.2.1 np
SRR6797866 Sensitive lineage2.2.1 None
SRR22137467 Pre-XDR-TB lineage2.2.1 None
ERR4830899 Pre-XDR-TB lineage2.2.1 np
SRR6339639 Sensitive lineage2.2.1 None
SRR22424931 Pre-XDR-TB lineage2.2.1 None
DRR034429 Sensitive lineage2.2.1 None
SRR12420473 Pre-XDR-TB lineage2.2.1 None
DRR130072 Pre-XDR-TB lineage2.2.1 None
SRR12420829 MDR-TB lineage2.2.1 None
ERR4553583 MDR-TB lineage2.2.1 None
SRR22137463 Pre-XDR-TB lineage2.2.1 None
SRR12420606 Sensitive lineage2.2.1 None
SRR22251602 Sensitive lineage2.2.1 None
SRR22137450 Pre-XDR-TB lineage2.2.1 None
SRR12420751 HR-TB lineage2.2.1 None
SRR22137429 Pre-XDR-TB lineage2.2.1 None
SRR12420394 MDR-TB lineage2.2.1 None
SRR12420527 Sensitive lineage2.2.1 None
ERR4797255 Sensitive lineage2.2.1 None
SRR28045255 Pre-XDR-TB lineage2.2.1 None
SRR28045918 HR-TB lineage2.2.1 None
SRR28046209 Pre-XDR-TB lineage2.2.1 None
SRR12142448 Pre-XDR-TB lineage2.2.1 None
DRR249155 Sensitive lineage2.2.1 None
SRR22137464 Pre-XDR-TB lineage2.2.1 None
SRR22137430 Pre-XDR-TB lineage2.2.1 None
SRR5341277 MDR-TB lineage2.2.1 None
SRR22137410 Pre-XDR-TB lineage2.2.1 None
SRR12420423 RR-TB lineage2.2.1 None
SRR21732365 Sensitive lineage2.2.1 None
SRR19303999 Pre-XDR-TB lineage2.2.1 None
ERR4798365 Pre-XDR-TB lineage2.2.1 in
SRR671746 MDR-TB lineage2.2.1 cn
DRR249156 HR-TB lineage2.2.1 None
SRR12420273 Sensitive lineage2.2.1 None
ERR2516293 Sensitive lineage2.2.1 be
SRR22137473 Pre-XDR-TB lineage2.2.1 None
SRR12420307 RR-TB lineage2.2.1 None
SRR22048286 Pre-XDR-TB lineage2.2.1 None
SRR22137466 Pre-XDR-TB lineage2.2.1 None
SRR12420746 Sensitive lineage2.2.1 None
ERR4811639 Sensitive lineage2.2.1 cn
SRR22137421 Pre-XDR-TB lineage2.2.1 None
ERR11138644 MDR-TB lineage2.2.1 None
ERR2513405 Other lineage2.2.1 None
ERR9125486 MDR-TB lineage2.2.1 None
SRR22137433 Pre-XDR-TB lineage2.2.1 None
SRR22137470 Pre-XDR-TB lineage2.2.1 None
SRR22137460 Pre-XDR-TB lineage2.2.1 None
SRR22137431 Pre-XDR-TB lineage2.2.1 None
SRR25207255 MDR-TB lineage2.2.1 None
ERR9125213 MDR-TB lineage2.2.1 None
ERR11080913 MDR-TB lineage2.2.1 None
SRR25207251 MDR-TB lineage2.2.1 None
SRR12420261 Sensitive lineage2.2.1 None
SRR22137425 Pre-XDR-TB lineage2.2.1 None
ERR2145516 Sensitive lineage2.2.1 None
SRR22250042 Sensitive lineage2.2.1 None
SRR12420700 MDR-TB lineage2.2.1 None
ERR4831036 HR-TB lineage2.2.1 np
ERR4811648 Sensitive lineage2.2.1 cn
ERR4810974 MDR-TB lineage2.2.1 cn
SRR12420792 Sensitive lineage2.2.1 None
SRR15723073 Sensitive lineage2.2.1 None
SRR12142409 Pre-XDR-TB lineage2.2.1 None
ERR4798301 Pre-XDR-TB lineage2.2.1 in
ERR4830910 Pre-XDR-TB lineage2.2.1 np
SRR12420517 HR-TB lineage2.2.1 None
SRR22137454 Pre-XDR-TB lineage2.2.1 None
SRR22137391 Pre-XDR-TB lineage2.2.1 None
ERR4830907 Pre-XDR-TB lineage2.2.1 np
SRR12420355 MDR-TB lineage2.2.1 None
SRR17732463 Sensitive lineage2.2.1 None
DRR249153 Sensitive lineage2.2.1 None
SRR22251476 Sensitive lineage2.2.1 None
SRR12420382 HR-TB lineage2.2.1 None
SRR12420608 Sensitive lineage2.2.1 None
SRR22137426 Pre-XDR-TB lineage2.2.1 None
SRR7517745 MDR-TB lineage2.2.1 None
ERR9125253 Pre-XDR-TB lineage2.2.1 None
SRR22137419 Pre-XDR-TB lineage2.2.1 None
SRR12420433 MDR-TB lineage2.2.1 None
SRR18912994 MDR-TB lineage2.2.1 None
SRR12420556 Sensitive lineage2.2.1 None
SRR22137428 Pre-XDR-TB lineage2.2.1 None
SRR22137402 Pre-XDR-TB lineage2.2.1 None
SRR12420563 MDR-TB lineage2.2.1 None
SRR12420818 Sensitive lineage2.2.1 None
ERR4830900 Pre-XDR-TB lineage2.2.1 np
SRR12420756 MDR-TB lineage2.2.1 None
SRR28409723 Pre-XDR-TB lineage2.2.1 None
SRR27069400 MDR-TB lineage2.2.1 None
ERR4797979 MDR-TB lineage2.2.1 in
SRR22137451 Pre-XDR-TB lineage2.2.1 None
SRR13423632 Other lineage2.2.1 None
ERR4276861 Pre-XDR-TB lineage2.2.1 None
ERR983241 MDR-TB lineage2.2.1 None
SRR25207250 MDR-TB lineage2.2.1 None
SRR22137412 Pre-XDR-TB lineage2.2.1 None
SRR6824662 RR-TB lineage2.2.1 cn
SRR22137474 Pre-XDR-TB lineage2.2.1 None
ERR11081227 MDR-TB lineage2.2.1 None
SRR12420426 Sensitive lineage2.2.1 None
DRR249158 Sensitive lineage2.2.1 None
SRR15316593 Sensitive lineage2.2.1 None
SRR12420429 Sensitive lineage2.2.1 None
SRR12420300 MDR-TB lineage2.2.1 None
SRR25207129 MDR-TB lineage2.2.1 None
SRR22137472 Pre-XDR-TB lineage2.2.1 None
DRR249154 Sensitive lineage2.2.1 None
SRR8237325 MDR-TB lineage2.2.1 np
SRR16058662 MDR-TB lineage2.2.1 None
SRR16057904 MDR-TB lineage2.2.1 None
SRR070008 Pre-XDR-TB lineage2.2.1 None
SRR22137418 Pre-XDR-TB lineage2.2.1 None
SRR12420280 MDR-TB lineage2.2.1 None
SRR1723490 HR-TB lineage2.2.1;lineage4.5 cn
SRR671738 MDR-TB lineage2.2.1 cn
DRR249157 Sensitive lineage2.2.1 None
SRR11972348 MDR-TB lineage2.2.1 None
SRR12420617 Sensitive lineage2.2.1 None
SRR22137457 Pre-XDR-TB lineage2.2.1 None
SRR16627751 MDR-TB lineage2.2.1 None
SRR12420761 MDR-TB lineage2.2.1 None
SRR16058676 MDR-TB lineage2.2.1 None
SRR12420708 Sensitive lineage2.2.1 None
DRR130071 Pre-XDR-TB lineage2.2.1 None
SRR12420720 MDR-TB lineage2.2.1 None
ERR751873 Sensitive lineage2.2.1 th
SRR22137471 Pre-XDR-TB lineage2.2.1 None
SRR12420725 MDR-TB lineage2.2.1 None
SRR17732473 Sensitive lineage2.2.1 None
SRR16058404 Pre-XDR-TB lineage2.2.1 None
ERR8773592 MDR-TB lineage2.2.1 None
ERR4830906 Pre-XDR-TB lineage2.2.1 np
SRR12420618 MDR-TB lineage2.2.1 None
SAMN03246246 RR-TB lineage2.2.1 cn
SRR22137416 XDR-TB lineage2.2.1 None
SRR12420540 RR-TB lineage2.2.1 None
SRR12420709 Sensitive lineage2.2.1 None
ERR8773594 MDR-TB lineage2.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR12420575 MDR-TB lineage2.2.1 None
SRR12420321 Pre-XDR-TB lineage2.2.1 None
SRR12420807 HR-TB lineage2.2.1 None
SRR22137459 Pre-XDR-TB lineage2.2.1 None
SRR12420811 Other lineage2.2.1 None
SRR12420309 HR-TB lineage2.2.1 None
SRR22137446 Pre-XDR-TB lineage2.2.1 None
ERR8773599 MDR-TB lineage2.2.1 None
SRR21657658 Other lineage2.2.1 None
SRR8237311 Sensitive lineage2.2.1 np
SRR25827335 Pre-XDR-TB lineage2.2.1 None
ERR4798578 MDR-TB lineage2.2.1 in
SRR16115879 MDR-TB lineage2.2.1 None
SRR22137414 Pre-XDR-TB lineage2.2.1 None
DRR184913 Sensitive lineage2.2.1 None
SRR25827600 Pre-XDR-TB lineage2.2.1 None
SRR12420823 Sensitive lineage2.2.1 None
SRR18549003 HR-TB lineage2.2.1 None
SRR1723488 RR-TB lineage2.2.1 None
SRR12420393 Pre-XDR-TB lineage2.2.1 None
ERR4830962 Pre-XDR-TB lineage2.2.1 np
SRR12420376 RR-TB lineage2.2.1 None
SRR22137435 Pre-XDR-TB lineage2.2.1 None
ERR4811110 Sensitive lineage2.2.1 cn
ERR4830659 Pre-XDR-TB lineage2.2.1 np
ERR8773601 MDR-TB lineage2.2.1 None
SRR26112774 Sensitive lineage2.2.1 None
SRR22137456 Pre-XDR-TB lineage2.2.1 None
SRR28045993 Sensitive lineage2.2.1 None
ERR4553559 MDR-TB None
SRR28409590 RR-TB lineage2.2.1 None
SRR28045574 Pre-XDR-TB lineage2.2.1 None
SRR28044897 MDR-TB lineage2.2.1 None
SRR28351262 MDR-TB lineage2.2.1 None
SRR28044798 Pre-XDR-TB lineage2.2.1 None
SRR28045618 Other lineage2.2.1 None
SRR28045651 MDR-TB lineage2.2.1 None
SRR28044553 Pre-XDR-TB lineage2.2.1 None
SRR28045463 Pre-XDR-TB lineage2.2.1 None
SRR12420614 Sensitive lineage2.2.1 None
SRR22137449 MDR-TB lineage2.2.1 None
SRR22137468 Pre-XDR-TB lineage2.2.1 None
ERR11043812 Pre-XDR-TB lineage2.2.1 None
SRR12420533 Sensitive lineage2.2.1 None
SRR21277231 Sensitive lineage2.2.1 None
SRR22249368 Sensitive lineage2.2.1 None
SRR12420774 Sensitive lineage2.2.1 None
ERR4830908 Pre-XDR-TB lineage2.2.1 np
SRR12420716 MDR-TB lineage2.2.1 None
SRR22137413 Pre-XDR-TB lineage2.2.1 None
ERR4830993 Pre-XDR-TB lineage2.2.1 np
SRR18002958 Sensitive lineage2.2.1 None
ERR2516240 Sensitive lineage2.2.1 be
SRR16100235 Pre-XDR-TB lineage2.2.1 None
SRR12420304 MDR-TB lineage2.2.1 None
ERR4811646 MDR-TB lineage2.2.1 cn
SRR25534179 HR-TB lineage2.2.1 None
SRR22137455 Pre-XDR-TB lineage2.2.1 None
ERR4797611 Pre-XDR-TB lineage2.2.1 in
SRR7517707 Other lineage2.2.1 ch
SRR26112074 Sensitive lineage2.2.1 None
SRR22137469 Pre-XDR-TB lineage2.2.1 None
SRR25207243 MDR-TB lineage2.2.1 None
SRR22137423 Pre-XDR-TB lineage2.2.1 None
SRR22137475 Pre-XDR-TB lineage2.2.1 None
SRR22137478 Pre-XDR-TB lineage2.2.1 None
SRR22137462 Pre-XDR-TB lineage2.2.1 None
SRR22137424 Pre-XDR-TB lineage2.2.1 None
SRR12420298 Sensitive lineage2.2.1 None
SRR22137432 Pre-XDR-TB lineage2.2.1 None
SRR12420758 Pre-XDR-TB lineage2.2.1 None
SRR16097562 Pre-XDR-TB lineage2.2.1 None