Rv2754c - c.660C>T
Drug resistance types
33 Sensitive
2 RR-TB
6 HR-TB
34 MDR-TB
77 Pre-XDR-TB
1 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 153 |
| lineage2.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 32 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15723193 | Sensitive | lineage2.2.1 | None | SRR12142448 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423632 | Other | lineage2.2 | None | SRR11972348 | MDR-TB | lineage2.2.1 | None | SRR12142409 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316593 | Sensitive | lineage2.2.1 | None | SRR15723073 | Sensitive | lineage2.2.1 | None | SRR16058404 | Pre-XDR-TB | lineage2.2.1 | None | SRR16057904 | MDR-TB | lineage2.2.1 | None | SRR16058662 | MDR-TB | lineage2.2.1 | None | SRR16097562 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058676 | MDR-TB | lineage2.2.1 | None | SRR16115879 | MDR-TB | lineage2.2.1 | None | SRR16100235 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549003 | HR-TB | lineage2.2.1 | None | SRR17732463 | Sensitive | lineage2.2.1 | None | SRR18002958 | Sensitive | lineage2.2.1 | None | SRR16627751 | MDR-TB | lineage2.2.1 | None | SRR17732473 | Sensitive | lineage2.2.1 | None | SRR18912994 | MDR-TB | lineage2.2.1 | None | SRR19303999 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112774 | Sensitive | lineage2.2.1 | None | SRR21277231 | Sensitive | lineage2.2.1 | None | SRR25207255 | MDR-TB | lineage2.2.1 | None | SRR25827335 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | SRR21657658 | Sensitive | lineage2.2.1 | None | SRR22048286 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080913 | MDR-TB | lineage2.2.1 | None | ERR11081227 | MDR-TB | lineage2.2.1 | None | SRR22137412 | Pre-XDR-TB | lineage2.2.1 | None | ERR11138644 | MDR-TB | lineage2.2.1 | None | SRR6797866 | Sensitive | lineage2.2.1 | None | SRR25534179 | HR-TB | lineage2.2.1 | None | SRR22137391 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137418 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137402 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137413 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137433 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137419 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137427 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137429 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137446 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137426 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137455 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137454 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137450 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137451 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137464 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137463 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137457 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137460 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137472 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137462 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137473 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207243 | MDR-TB | lineage2.2.1 | None | SRR22137474 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207129 | MDR-TB | lineage2.2.1 | None | SRR26112776 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207250 | MDR-TB | lineage2.2.1 | None | SRR25207251 | MDR-TB | lineage2.2.1 | None | SRR26112074 | Sensitive | lineage2.2.1 | None | SRR25827600 | Pre-XDR-TB | lineage2.2.1 | None | SRR671746 | MDR-TB | lineage2.2.1 | cn | SRR671738 | MDR-TB | lineage2.2.1 | cn | SAMN03246246 | RR-TB | lineage2.2.1 | cn | SRR1723490 | HR-TB | lineage4.5;lineage2.2.1 | cn | SRR8237311 | Sensitive | lineage2.2.1 | np | SRR6824662 | RR-TB | lineage2.2.1 | cn | SRR8237325 | MDR-TB | lineage2.2.1 | np | ERR4831036 | HR-TB | lineage2.2.1 | np | SRR7517707 | Other | lineage2.2.1 | ch | ERR2513405 | Other | lineage2.2.1 | None | SRR6045289 | Other | None | SRR7517745 | MDR-TB | lineage2.2.1 | None | ERR751873 | Sensitive | lineage2.2.1 | th | SRR5341277 | MDR-TB | lineage2.2.1 | None | ERR2516293 | Sensitive | lineage2.2.1 | be | ERR4798301 | Pre-XDR-TB | lineage2.2.1 | in | ERR2516240 | Sensitive | lineage2.2.1 | be | ERR4798365 | Pre-XDR-TB | lineage2.2.1 | in | ERR4810974 | MDR-TB | lineage2.2.1 | cn | ERR4830962 | Pre-XDR-TB | lineage2.2.1 | np | SRR6339639 | Sensitive | lineage2.2.1 | None | ERR4798578 | MDR-TB | lineage2.2.1 | in | ERR4811639 | Sensitive | lineage2.2.1 | cn | ERR4830899 | Pre-XDR-TB | lineage2.2.1 | np | ERR4811110 | Sensitive | lineage2.2.1 | cn | ERR4811648 | Sensitive | lineage2.2.1 | cn | ERR4811646 | MDR-TB | lineage2.2.1 | cn | ERR4830900 | Pre-XDR-TB | lineage2.2.1 | np | ERR4797979 | MDR-TB | lineage2.2.1 | in | ERR4797611 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830993 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830910 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830907 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830902 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830906 | Pre-XDR-TB | lineage2.2.1 | np | DRR130071 | Pre-XDR-TB | lineage2.2.1 | None | DRR034429 | Sensitive | lineage2.2.1 | None | DRR130072 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830908 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830659 | Pre-XDR-TB | lineage2.2.1 | np | DRR249156 | HR-TB | lineage2.2.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | DRR249158 | Sensitive | lineage2.2.1 | None | DRR249153 | Sensitive | lineage2.2.1 | None | DRR249157 | Sensitive | lineage2.2.1 | None | DRR249155 | Sensitive | lineage2.2.1 | None | DRR249154 | Sensitive | lineage2.2.1 | None | ERR11043812 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034652 | Other | None | ERR4276861 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553583 | MDR-TB | lineage2.2.1 | None | ERR4553559 | MDR-TB | None | SRR22137423 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797255 | Sensitive | lineage2.2.1 | None | SRR21732365 | Sensitive | lineage2.2.1 | None | SRR22137410 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137416 | XDR-TB | lineage2.2.1 | None | ERR2145516 | Sensitive | lineage2.2.1 | None | SRR22137430 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137432 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137461 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137449 | MDR-TB | lineage2.2.1 | None | SRR22137456 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137466 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137470 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137468 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137414 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137475 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137479 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251602 | Sensitive | lineage2.2.1 | None | SRR22137471 | Pre-XDR-TB | lineage2.2.1 | None | SRR22249368 | Sensitive | lineage2.2.1 | None | SRR22137421 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137424 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137453 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137428 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137469 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137431 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137459 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137467 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137435 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137478 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773594 | HR-TB | lineage2.2.1 | None | ERR8773599 | MDR-TB | lineage2.2.1 | None | ERR8773592 | MDR-TB | lineage2.2.1 | None | SRR22250042 | Sensitive | lineage2.2.1 | None | ERR8773601 | MDR-TB | lineage2.2.1 | None | SRR22251476 | Sensitive | lineage2.2.1 | None | ERR9125213 | MDR-TB | lineage2.2.1 | None | ERR9125253 | Pre-XDR-TB | lineage2.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9125473 | MDR-TB | lineage2.2.1 | None | ERR9125486 | MDR-TB | lineage2.2.1 | None | SRR070008 | Pre-XDR-TB | lineage2.2.1 | None |
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