Rv2754c - c.660C>T
Drug resistance types
92 Sensitive
9 RR-TB
12 HR-TB
67 MDR-TB
97 Pre-XDR-TB
2 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 281 |
| lineage3 | 1 |
| 1 | |
| lineage2.2.1;lineage4.5 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 285 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12420811 | Other | lineage2.2.1 | None | SRR28046209 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420758 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266325 | Sensitive | lineage2.2.1 | None | ERR13265089 | Sensitive | lineage2.2.1 | None | SRR21732365 | Sensitive | lineage2.2.1 | None | ERR13265577 | Sensitive | lineage2.2.1 | None | SRR5341277 | MDR-TB | lineage2.2.1 | None | SRR16097562 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798365 | Pre-XDR-TB | lineage2.2.1 | in | ERR13265781 | Sensitive | lineage2.2.1 | None | DRR249154 | Sensitive | lineage2.2.1 | None | SRR29441041 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517707 | Other | lineage2.2.1 | ch | SRR671746 | MDR-TB | lineage2.2.1 | cn | SRR22137455 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797611 | Pre-XDR-TB | lineage2.2.1 | in | SRR16058662 | MDR-TB | lineage2.2.1 | None | ERR13265926 | Sensitive | lineage2.2.1 | None | SRR22137418 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266761 | XDR-TB | lineage2.2.1 | None | SRR18912994 | MDR-TB | lineage2.2.1 | None | SRR25207243 | MDR-TB | lineage2.2.1 | None | DRR249157 | Sensitive | lineage2.2.1 | None | SRR29093932 | MDR-TB | lineage2.2.1 | None | ERR13258398 | Pre-XDR-TB | lineage2.2.1 | None | SRR29440980 | Sensitive | lineage2.2.1 | None | SRR12420298 | Sensitive | lineage2.2.1 | None | ERR13258495 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265411 | Pre-XDR-TB | lineage2.2.1 | None | SRR21657658 | Sensitive | lineage2.2.1 | None | SRR12420761 | MDR-TB | lineage2.2.1 | None | SRR12420720 | MDR-TB | lineage2.2.1 | None | SRR28044897 | MDR-TB | lineage2.2.1 | None | SRR12142448 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420426 | Sensitive | lineage2.2.1 | None | SRR25207251 | MDR-TB | lineage2.2.1 | None | ERR13265924 | Sensitive | lineage2.2.1 | None | ERR13265994 | Sensitive | lineage2.2.1 | None | ERR4830962 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811648 | Sensitive | lineage2.2.1 | cn | SRR17732473 | Sensitive | lineage2.2.1 | None | SRR12420746 | Sensitive | lineage2.2.1 | None | SRR22137473 | Pre-XDR-TB | lineage2.2.1 | None | SRR8237311 | Sensitive | lineage2.2.1 | np | SRR22137461 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137470 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142409 | Pre-XDR-TB | lineage2.2.1 | None | SRR28409590 | RR-TB | lineage2.2.1 | None | SRR28409723 | Pre-XDR-TB | lineage2.2.1 | None | SRR22048286 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017156 | MDR-TB | lineage3 | None | ERR13264971 | Sensitive | lineage2.2.1 | None | SRR22137391 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420321 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420700 | MDR-TB | lineage2.2.1 | None | SRR6797866 | Sensitive | lineage2.2.1 | None | SRR22137467 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265812 | Sensitive | lineage2.2.1 | None | ERR13265962 | Sensitive | lineage2.2.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR13265555 | Sensitive | lineage2.2.1 | None | ERR13266256 | Sensitive | lineage2.2.1 | None | SRR22251476 | Sensitive | lineage2.2.1 | None | DRR034429 | Sensitive | lineage2.2.1 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137459 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420309 | HR-TB | lineage2.2.1 | None | SRR12420608 | Sensitive | lineage2.2.1 | None | SRR12420473 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420300 | MDR-TB | lineage2.2.1 | None | ERR11138644 | MDR-TB | lineage2.2.1 | None | ERR11043812 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137426 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827335 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137419 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420433 | MDR-TB | lineage2.2.1 | None | ERR13260093 | MDR-TB | lineage2.2.1 | None | ERR13265165 | Sensitive | lineage2.2.1 | None | SRR12420829 | MDR-TB | lineage2.2.1 | None | SRR22137428 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137462 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137412 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420823 | Sensitive | lineage2.2.1 | None | SRR12420563 | MDR-TB | lineage2.2.1 | None | SRR12420708 | Sensitive | lineage2.2.1 | None | SRR1723488 | RR-TB | lineage2.2.1 | None | SRR29093917 | MDR-TB | lineage2.2.1 | None | ERR13265708 | Sensitive | lineage2.2.1 | None | SRR22251602 | Sensitive | lineage2.2.1 | None | ERR13266346 | Sensitive | lineage2.2.1 | None | DRR130071 | Pre-XDR-TB | lineage2.2.1 | None | DRR249156 | HR-TB | lineage2.2.1 | None | ERR4830900 | Pre-XDR-TB | lineage2.2.1 | np | ERR4811110 | Sensitive | lineage2.2.1 | cn | SRR28045618 | Other | lineage2.2.1 | None | SRR12420511 | Sensitive | lineage2.2.1 | None | ERR8773601 | MDR-TB | lineage2.2.1 | None | ERR4797255 | Sensitive | lineage2.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | SRR28045574 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351262 | MDR-TB | lineage2.2.1 | None | SRR27069400 | MDR-TB | lineage2.2.1 | None | SRR28044798 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045651 | MDR-TB | lineage2.2.1 | None | SRR28044553 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291573 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265385 | Sensitive | lineage2.2.1 | None | SRR29440849 | Sensitive | lineage2.2.1 | None | SRR28868795 | Sensitive | lineage2.2.1 | None | SRR30182501 | MDR-TB | lineage2.2.1 | None | ERR4830910 | Pre-XDR-TB | lineage2.2.1 | np | ERR8773592 | MDR-TB | lineage2.2.1 | None | SRR12420305 | RR-TB | lineage2.2.1 | None | SRR12420533 | Sensitive | lineage2.2.1 | None | SRR21277231 | Sensitive | lineage2.2.1 | None | SRR22137460 | Pre-XDR-TB | lineage2.2.1 | None | SRR6339639 | Sensitive | lineage2.2.1 | None | SRR22137424 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125486 | MDR-TB | lineage2.2.1 | None | SRR12420429 | Sensitive | lineage2.2.1 | None | SRR12420792 | Sensitive | lineage2.2.1 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR22137450 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265077 | Sensitive | lineage2.2.1 | None | ERR13265884 | Sensitive | lineage2.2.1 | None | ERR13265096 | Sensitive | lineage2.2.1 | None | ERR8773594 | MDR-TB | lineage2.2.1 | None | SRR11972348 | MDR-TB | lineage2.2.1 | None | SRR22137413 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420517 | HR-TB | lineage2.2.1 | None | SRR28045918 | HR-TB | lineage2.2.1 | None | SRR22137431 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137435 | Pre-XDR-TB | lineage2.2.1 | None | DRR249158 | Sensitive | lineage2.2.1 | None | ERR13193801 | MDR-TB | lineage2.2.1 | None | SRR12420767 | Sensitive | lineage2.2.1 | None | SRR22137451 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265695 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266268 | Sensitive | lineage2.2.1 | None | ERR2516293 | Sensitive | lineage2.2.1 | be | SRR12420614 | Sensitive | lineage2.2.1 | None | SRR25207250 | MDR-TB | lineage2.2.1 | None | SRR13423632 | Other | lineage2.2.1 | None | SRR22137468 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137427 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420606 | Sensitive | lineage2.2.1 | None | SRR6824662 | RR-TB | lineage2.2.1 | cn | SAMN03246246 | RR-TB | lineage2.2.1 | cn | SRR22137474 | Pre-XDR-TB | lineage2.2.1 | None | DRR249155 | Sensitive | lineage2.2.1 | None | SRR18002958 | Sensitive | lineage2.2.1 | None | SRR16100235 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137410 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420423 | RR-TB | lineage2.2.1 | None | ERR4811646 | MDR-TB | lineage2.2.1 | cn | SRR12420351 | Sensitive | lineage2.2.1 | None | ERR9125213 | MDR-TB | lineage2.2.1 | None | ERR11080913 | MDR-TB | lineage2.2.1 | None | SRR22137472 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265002 | Sensitive | lineage2.2.1 | None | ERR4830907 | Pre-XDR-TB | lineage2.2.1 | np | SRR070008 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420273 | Sensitive | lineage2.2.1 | None | SRR12420617 | Sensitive | lineage2.2.1 | None | SRR12420807 | HR-TB | lineage2.2.1 | None | SRR26112074 | Sensitive | lineage2.2.1 | None | ERR4797979 | MDR-TB | lineage2.2.1 | in | SRR671738 | MDR-TB | lineage2.2.1 | cn | SRR22137454 | Pre-XDR-TB | lineage2.2.1 | None | SRR16057904 | MDR-TB | lineage2.2.1 | None | SRR17732463 | Sensitive | lineage2.2.1 | None | SRR22137469 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549003 | HR-TB | lineage2.2.1 | None | ERR13243113 | MDR-TB | lineage2.2.1 | None | ERR4811639 | Sensitive | lineage2.2.1 | cn | SRR12420556 | Sensitive | lineage2.2.1 | None | SRR12420725 | MDR-TB | lineage2.2.1 | None | DRR130072 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262243 | Sensitive | lineage2.2.1 | None | SRR22137457 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137421 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137433 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627751 | MDR-TB | lineage2.2.1 | None | SRR16058676 | MDR-TB | lineage2.2.1 | None | SRR25207255 | MDR-TB | lineage2.2.1 | None | SRR19303999 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137402 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081227 | MDR-TB | lineage2.2.1 | None | SRR25207129 | MDR-TB | lineage2.2.1 | None | SRR22137475 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291955 | Pre-XDR-TB | lineage2.2.1 | None | ERR13259992 | MDR-TB | lineage2.2.1 | None | ERR751873 | Sensitive | lineage2.2.1 | th | ERR2145516 | Sensitive | lineage2.2.1 | None | ERR4830659 | Pre-XDR-TB | lineage2.2.1 | np | SRR22250042 | Sensitive | lineage2.2.1 | None | ERR4831036 | HR-TB | lineage2.2.1 | np | ERR4810974 | MDR-TB | lineage2.2.1 | cn | ERR4830906 | Pre-XDR-TB | lineage2.2.1 | np | SRR15723073 | Sensitive | lineage2.2.1 | None | SRR12420261 | Sensitive | lineage2.2.1 | None | SRR29093127 | HR-TB | lineage2.2.1 | None | SRR22137432 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420618 | MDR-TB | lineage2.2.1 | None | ERR4798301 | Pre-XDR-TB | lineage2.2.1 | in | SRR22137416 | XDR-TB | lineage2.2.1 | None | ERR13266764 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112774 | Sensitive | lineage2.2.1 | None | SRR12420355 | MDR-TB | lineage2.2.1 | None | ERR13265151 | Sensitive | lineage2.2.1 | None | SRR12420382 | HR-TB | lineage2.2.1 | None | SRR22137446 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773599 | MDR-TB | lineage2.2.1 | None | SRR12420818 | Sensitive | lineage2.2.1 | None | SRR7517745 | MDR-TB | lineage2.2.1 | None | ERR4798578 | MDR-TB | lineage2.2.1 | in | SRR29093942 | MDR-TB | lineage2.2.1 | None | SRR16115879 | MDR-TB | lineage2.2.1 | None | SRR25827600 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420540 | RR-TB | lineage2.2.1 | None | SRR12420756 | MDR-TB | lineage2.2.1 | None | ERR4553583 | MDR-TB | lineage2.2.1 | None | SRR22137463 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420393 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137471 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420751 | HR-TB | lineage2.2.1 | None | SRR22137429 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420304 | MDR-TB | lineage2.2.1 | None | SRR12420307 | RR-TB | lineage2.2.1 | None | ERR13266335 | Sensitive | lineage2.2.1 | None | SRR12420527 | Sensitive | lineage2.2.1 | None | SRR28045255 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045463 | Pre-XDR-TB | lineage2.2.1 | None | SRR8237325 | MDR-TB | lineage2.2.1 | np | ERR13265252 | Sensitive | lineage2.2.1 | None | SRR22137466 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137478 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772444 | Pre-XDR-TB | lineage2.2.1 | None | SRR29440567 | Sensitive | lineage2.2.1 | None | SRR22137456 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093377 | MDR-TB | lineage2.2.1 | None | ERR13194028 | Sensitive | lineage2.2.1 | None | ERR13265696 | Sensitive | lineage2.2.1 | None | ERR13265780 | Sensitive | lineage2.2.1 | None | ERR4553559 | MDR-TB | None | ERR9125253 | Pre-XDR-TB | lineage2.2.1 | None | ERR13191048 | Sensitive | lineage2.2.1 | None | SRR12420394 | MDR-TB | lineage2.2.1 | None | SRR12420575 | MDR-TB | lineage2.2.1 | None | SRR1723490 | HR-TB | lineage2.2.1;lineage4.5 | cn | ERR2516240 | Sensitive | lineage2.2.1 | be | SRR12420716 | MDR-TB | lineage2.2.1 | None | SRR22137479 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137414 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265316 | Sensitive | lineage2.2.1 | None | ERR13291028 | MDR-TB | lineage2.2.1 | None | ERR4830908 | Pre-XDR-TB | lineage2.2.1 | np | SRR22137430 | Pre-XDR-TB | lineage2.2.1 | None | DRR249153 | Sensitive | lineage2.2.1 | None | ERR13276413 | MDR-TB | lineage2.2.1 | None | SRR22249368 | Sensitive | lineage2.2.1 | None | SRR22137453 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316593 | Sensitive | lineage2.2.1 | None | SRR16058404 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265147 | Sensitive | lineage2.2.1 | None | ERR13265485 | Sensitive | lineage2.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4830902 | Pre-XDR-TB | lineage2.2.1 | np | SRR12420376 | RR-TB | lineage2.2.1 | None | SRR25534179 | HR-TB | lineage2.2.1 | None | SRR22137449 | MDR-TB | lineage2.2.1 | None | ERR4276861 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137423 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045993 | Sensitive | lineage2.2.1 | None | ERR4830899 | Pre-XDR-TB | lineage2.2.1 | np | SRR26112776 | Pre-XDR-TB | lineage2.2.1 | None | ERR13232476 | MDR-TB | lineage2.2.1 | None | SRR12420774 | Sensitive | lineage2.2.1 | None | SRR22137464 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265887 | Sensitive | lineage2.2.1 | None | ERR4830993 | Pre-XDR-TB | lineage2.2.1 | np | SRR12420280 | MDR-TB | lineage2.2.1 | None | SRR12420709 | Sensitive | lineage2.2.1 | None |
|---|
