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SRA data
Rv2754c
- p.Asp22Glu
Drug resistance types
5 Sensitive
0 RR-TB
4 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
4
lineage1.1.3.1
2
lineage4.9
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
lineage4.9;lineage7
1
La1.7.1;La1.7.X-unk4;lineage7
1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
11
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3445501
HR-TB
La1.7.1;La1.7.X-unk4;lineage7
None
ERR3445502
Sensitive
lineage4.9;lineage7
None
ERR3509861
HR-TB
lineage1.1.3.1
None
ERR4811372
HR-TB
lineage2.2.1
None
ERR4811533
Sensitive
lineage2.2.1
cn
ERR6359045
Other
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
None
SRR12882559
HR-TB
lineage1.1.3.1
None
SRR21732299
Sensitive
lineage2.2.1
None
SRR24114365
Sensitive
lineage2.2.1
None
SRR29017081
Sensitive
lineage4.9
None
Showing 1 to 10 of 11 entries
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