Rv3457c - c.-130G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
75 Sensitive
3 RR-TB
18 HR-TB
74 MDR-TB
39 Pre-XDR-TB
4 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1;lineage4.8 | 1 |
| lineage2.2.1 | 67 |
| lineage4.1.2.1 | 11 |
| lineage3 | 14 |
| lineage4.2.1 | 4 |
| lineage4.2.1.1 | 7 |
| lineage1.2.2.2 | 8 |
| lineage4.4.1.1 | 3 |
| lineage4.2 | 3 |
| lineage4.8 | 26 |
| lineage2.2.2 | 5 |
| lineage4.7 | 2 |
| lineage3.1.2 | 2 |
| lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage1.1.3.1 | 9 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.3.3 | 12 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.9 | 7 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage1.1.2 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.2.2.1 | 3 |
| lineage3;lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage3;lineage4.8 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 224 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14807491 | Other | lineage4.1.2.1;lineage4.8 | None | SRR14807642 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465317 | Sensitive | lineage4.1.2.1 | None | SRR14801591 | MDR-TB | lineage2.2.1 | None | ERR4827725 | Sensitive | lineage2.2.1 | None | SRR29017217 | MDR-TB | lineage3 | None | SRR10379890 | MDR-TB | lineage4.2.1 | None | ERR4800607 | Other | lineage2.2.1 | None | SRR14801909 | Sensitive | lineage4.2.1.1 | None | SRR10430401 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430391 | HR-TB | lineage2.2.1 | None | SRR14801971 | Sensitive | lineage2.2.1 | None | SRR14802164 | MDR-TB | lineage2.2.1 | None | SRR29017602 | MDR-TB | lineage1.2.2.2 | None | SRR29093125 | Sensitive | lineage4.4.1.1 | None | ERR13276290 | MDR-TB | lineage4.2 | None | ERR10465754 | Sensitive | lineage4.8 | None | SRR29017174 | MDR-TB | lineage2.2.2 | None | SRR29093969 | Pre-XDR-TB | lineage4.7 | None | SRR14801597 | Pre-XDR-TB | lineage2.2.1 | None | ERR6397158 | Sensitive | lineage3 | None | SRR29230716 | Sensitive | lineage3.1.2 | None | SRR25827744 | Pre-XDR-TB | lineage1.1.3.1;lineage2.2.1 | None | SRR25827881 | MDR-TB | lineage2.2.1 | None | SRR29017709 | Pre-XDR-TB | lineage1.1.3.1 | None | SRR29274004 | MDR-TB | lineage4.8 | None | ERR11775865 | HR-TB | lineage4.6.1.1 | None | SRR29017675 | HR-TB | lineage1.1.3.1 | None | ERR13276302 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017239 | MDR-TB | lineage1.1.3.1 | None | SRR14801959 | MDR-TB | lineage2.2.1 | None | ERR4827745 | HR-TB | lineage2.2.1 | None | ERR11043486 | Sensitive | lineage3 | None | SRR29017704 | MDR-TB | lineage1.1.3 | None | SRR29093972 | Sensitive | lineage2.2.1 | None | SRR29017402 | MDR-TB | lineage2.2.1 | None | SRR29016771 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017148 | MDR-TB | lineage4.8 | None | SRR14802053 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093888 | Pre-XDR-TB | lineage2.2.2 | None | ERR4800704 | Other | lineage4.8 | None | SRR29017348 | MDR-TB | lineage4.1.2.1 | None | SRR29017097 | MDR-TB | lineage1.1.3.1 | None | SRR29017404 | MDR-TB | lineage4.3.4.2 | None | SRR14782745 | Sensitive | lineage4.8 | None | ERR4799313 | HR-TB | lineage4.3.3 | in | SRR29016814 | MDR-TB | lineage2.2.1.2 | None | ERR4831124 | Sensitive | lineage4.4.1.1 | de | SRR13232759 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR11082672 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017040 | MDR-TB | lineage1.1.3.1 | None | SRR29017238 | MDR-TB | lineage1.2.2.2 | None | ERR5979663 | Other | lineage4.9 | None | ERR5979565 | Sensitive | lineage4.9 | None | ERR5979648 | Other | lineage4.9 | None | ERR4800599 | XDR-TB | lineage2.2.1 | in | ERR3470636 | Sensitive | lineage3 | None | ERR4827770 | Sensitive | lineage2.2.1;lineage3 | None | ERR3794362 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14807614 | Sensitive | lineage2.2.1 | None | ERR4822330 | MDR-TB | lineage4.2 | de | ERR11775043 | RR-TB | lineage4.3.4.2.1 | None | SRR10303320 | MDR-TB | lineage2.2.1 | None | ERR11775804 | Sensitive | lineage4.8.1 | None | ERR4827549 | MDR-TB | lineage2.2.1 | None | SRR25827806 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13278943 | MDR-TB | lineage3 | None | SRR29017673 | MDR-TB | lineage1.1.3.1 | None | SRR23310824 | MDR-TB | lineage2.2.1 | None | SRR14802262 | MDR-TB | lineage2.2.1 | None | SRR25827749 | XDR-TB | lineage2.2.1;lineage3;lineage4 | None | SRR14782533 | Sensitive | lineage4.2.1.1 | None | SRR14802021 | MDR-TB | lineage2.2.1 | None | SRR29017078 | Pre-XDR-TB | lineage3 | None | SRR14781841 | Sensitive | lineage4.8 | None | SRR25827485 | MDR-TB | lineage1.1.2 | None | SRR14801432 | MDR-TB | lineage2.2.1 | None | ERR10762427 | MDR-TB | lineage4.2.1 | None | SRR14782795 | Other | lineage4.2.1.1 | None | ERR11081818 | Sensitive | lineage4.1.2.1 | None | SRR27107273 | Pre-XDR-TB | lineage4.3.3 | None | SRR29017037 | MDR-TB | lineage4.8 | None | SRR29017573 | RR-TB | lineage3 | None | SRR29093241 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284094 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093220 | Sensitive | lineage2.2.1.1 | None | SRR29017548 | MDR-TB | lineage4 | None | ERR4797122 | Sensitive | lineage1.2.2.2 | None | SRR29017168 | MDR-TB | lineage3 | None | SRR29017091 | MDR-TB | lineage4.3.4.2 | None | ERR10112848 | XDR-TB | lineage4.8 | None | ERR4827597 | MDR-TB | lineage4.2.1 | None | SRR29017627 | HR-TB | lineage3.1.2.1 | None | ERR11083119 | Sensitive | lineage4.2.2.1 | None | SRR14782462 | Sensitive | lineage2.2.1 | None | SRR29093423 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087908 | MDR-TB | lineage2.2.1 | None | SRR29016869 | MDR-TB | lineage3;lineage4.3.4.2 | None | ERR11082721 | Sensitive | lineage4.8 | None | SRR14807622 | HR-TB | lineage2.2.1 | None | ERR11798589 | MDR-TB | lineage2.2.1 | None | ERR11798667 | MDR-TB | lineage4.2.1 | None | SRR14802088 | MDR-TB | lineage2.2.1 | None | SRR14807473 | MDR-TB | lineage2.2.1 | None | SRR14782734 | Sensitive | lineage4.8 | None | ERR4800652 | Sensitive | lineage1.1.2 | None | ERR4827809 | HR-TB | lineage2.2.1 | None | SRR14782736 | Sensitive | lineage4.8 | None | ERR11466567 | Sensitive | lineage4.3.2.1 | None | ERR13284270 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794503 | Pre-XDR-TB | lineage2.2.1 | None | SRR17406747 | HR-TB | lineage1.2.2.2 | None | SRR29017009 | MDR-TB | lineage2.2.2 | None | SRR29093467 | Sensitive | lineage4.3.2.1 | None | SRR29017005 | MDR-TB | lineage4.8 | None | SRR29017682 | MDR-TB | lineage4.3.4.2 | None | SRR29017648 | MDR-TB | lineage4 | None | ERR11081510 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232774 | Pre-XDR-TB | lineage4.3.3 | None | SRR29017691 | MDR-TB | lineage1.2.2.2 | None | SRR29231166 | Sensitive | lineage3 | None | SRR29016892 | HR-TB | lineage1.1.3.1 | None | ERR4831391 | Sensitive | lineage1.2.2.2 | de | SRR29017454 | Pre-XDR-TB | lineage4.8 | None | ERR4800598 | Pre-XDR-TB | lineage2.2.1 | in | SRR14802133 | MDR-TB | lineage2.2.1 | None | SRR29017394 | MDR-TB | lineage4.8 | None | ERR5979682 | Other | lineage4.9 | None | ERR5979673 | Other | lineage4.9 | None | ERR5979764 | Sensitive | lineage4.9 | None | ERR11082965 | Sensitive | lineage4.8 | None | SRR14801842 | Other | lineage4.2.1.1 | None | SRR14801898 | Sensitive | lineage2.2.1 | None | SRR14802015 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802057 | Sensitive | lineage4.3.4.1 | None | ERR11775349 | Sensitive | lineage4.3.2.1 | None | SRR24709966 | MDR-TB | lineage2.2.1 | None | ERR11773740 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830970 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4830990 | Pre-XDR-TB | lineage2.2.1 | np | SRR14782049 | Sensitive | lineage4.1.2.1 | None | SRR14802151 | MDR-TB | lineage2.2.1 | None | SRR14802264 | HR-TB | lineage4.2.1.1 | None | SRR14782019 | Other | lineage4.8 | None | SRR14782828 | MDR-TB | lineage2.2.1 | None | SRR29017011 | MDR-TB | lineage4.8 | None | ERR11044667 | Sensitive | lineage4.8 | None | ERR4276898 | MDR-TB | lineage4.2 | None | ERR11082200 | MDR-TB | lineage4.6.1.2 | None | SRR29016839 | MDR-TB | lineage1.1.2 | None | ERR4827558 | MDR-TB | lineage2.2.1 | None | SRR29017696 | MDR-TB | lineage1.2.2.2 | None | SRR29231051 | Sensitive | lineage3 | None | ERR10680099 | MDR-TB | lineage4.8 | None | ERR11465174 | Sensitive | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR2677445 | Pre-XDR-TB | lineage2.2.1 | de | SRR14782033 | Sensitive | lineage2.2.1;lineage4.8 | None | SRR23310923 | HR-TB | lineage2.2.1 | None | SRR10303338 | HR-TB | lineage2.2.1 | None | SRR14801919 | Sensitive | lineage4.2.1.1 | None | SRR10379898 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827506 | MDR-TB | lineage3;lineage4.8 | None | ERR4827862 | Sensitive | lineage4.3.3 | None | SRR10380020 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311061 | MDR-TB | lineage2.2.1 | None | ERR13284240 | MDR-TB | lineage4.6.1.2 | None | ERR4827693 | Sensitive | lineage4.8 | None | SRR29016832 | MDR-TB | lineage3 | None | ERR13267723 | Sensitive | lineage3 | None | SRR29093980 | Pre-XDR-TB | lineage2.2.2 | None | SRR10380195 | Sensitive | lineage4.1.2.1 | None | ERR11043880 | Sensitive | lineage3 | None | SRR18714796 | Sensitive | lineage4.1.2.1 | None | SRR14801533 | Sensitive | lineage4.8 | None | SRR14802119 | MDR-TB | lineage2.2.1 | None | SRR29017093 | MDR-TB | lineage4.8 | None | SRR14782810 | HR-TB | lineage4.3.3 | None | SRR14782808 | Sensitive | lineage4.3.3 | None | SRR14782803 | Sensitive | lineage2.2.1 | None | ERR11044799 | Sensitive | lineage4.1.2.1 | None | ERR11465734 | Sensitive | lineage4.3.4.1 | None | ERR13284292 | MDR-TB | lineage4.2.2.1 | None | SRR14782171 | Sensitive | lineage2.2.1 | None | ERR11465214 | Sensitive | lineage4.8 | None | SRR14802146 | HR-TB | lineage2.2.1 | None | ERR11082142 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315527 | Sensitive | lineage2.2.1 | None | SRR29231467 | Sensitive | lineage3.1.2 | None | SRR13232501 | Pre-XDR-TB | lineage4.3.3 | None | ERR11082420 | MDR-TB | lineage3 | None | SRR25827339 | Sensitive | lineage2.2.1.1 | None | SRR29017432 | HR-TB | lineage1.1.3.1 | None | SRR29016861 | MDR-TB | lineage1.1.3.1 | None | SRR29017422 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430372 | MDR-TB | lineage2.2.1 | None | ERR4831338 | Sensitive | lineage4.1.2.1 | de | ERR4831181 | MDR-TB | lineage2.2.1 | de | ERR5979775 | Sensitive | lineage4.9 | None | ERR11044177 | Sensitive | lineage4.5 | None | ERR11044417 | Sensitive | lineage4.1.2.1 | None | SRR23311034 | Sensitive | lineage4.8 | None | ERR11775514 | Sensitive | lineage4.4.1.1.1 | None | ERR4831183 | Sensitive | lineage4.8 | de | ERR11775073 | RR-TB | lineage2.2.1 | None | SRR14782026 | Other | lineage4.2.1.1 | None | ERR11465071 | Sensitive | lineage2.2.1;lineage4 | None | ERR4813753 | Sensitive | lineage4.3.3 | None | ERR11069015 | Sensitive | lineage4.7 | None | ERR11069066 | MDR-TB | lineage4.2.2.1 | None | SRR29017665 | MDR-TB | lineage2.2.1 | None | ERR13284973 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827851 | HR-TB | lineage4.3.3 | None | ERR3470611 | Sensitive | lineage4.4.1.1 | None | ERR3323728 | Sensitive | lineage4.1.2.1 | None | SRR14782052 | Sensitive | lineage4.8 | None | SRR24710284 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112841 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR4800583 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1.3 | None | ERR4827620 | HR-TB | lineage2.2.1 | None | ERR4827726 | Sensitive | lineage4.1.2.1 | None | ERR11044573 | Sensitive | lineage1.2.2.2 | None | SRR29230754 | Sensitive | lineage1.1.2 | None | SRR10303354 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802087 | MDR-TB | lineage2.2.1 | None |
|---|
