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SRA data
Rv3457c
- c.-458C>T
Drug resistance types
9 Sensitive
2 RR-TB
7 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
9
M.canetti;lineage2.1;lineage4.9
3
lineage4.9
3
lineage4.1.2.1
2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
1
lineage1.1.2
1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
22
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13291653
Sensitive
lineage2.2.1
None
ERR13292459
Sensitive
lineage2.2.1
None
ERR4796310
Sensitive
lineage1.1.2
None
ERR4811493
HR-TB
lineage4.9
None
ERR5162090
RR-TB
lineage4.9
None
SRR16370218
Sensitive
lineage2.2.1
None
SRR18913746
Sensitive
lineage2.2.1
None
SRR19224239
Sensitive
lineage2.2.1
None
SRR21686603
Sensitive
lineage2.2.1
None
SRR21798499
HR-TB
lineage4.1.2.1
None
Showing 1 to 10 of 22 entries
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