Rv3457c - c.18C>G
Drug resistance types
77 Sensitive
4 RR-TB
21 HR-TB
23 MDR-TB
13 Pre-XDR-TB
2 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 44 |
| lineage3 | 4 |
| 8 | |
| lineage4.8 | 48 |
| lineage4.3.3 | 14 |
| lineage4.2.1 | 5 |
| lineage4.1.2.1 | 4 |
| lineage4.3;lineage2.2.1 | 1 |
| lineage5.3 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.1 | 2 |
| lineage2.2 | 3 |
| lineage4.9 | 9 |
| lineage4.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage5.1.1 | 2 |
| lineage5.1.5 | 1 |
| lineage4.1.1 | 1 |
| lineage4 | 4 |
| lineage3.1.1 | 5 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5817474 | Sensitive | lineage2.2.1 | None | SRR5341194 | Sensitive | lineage3 | None | SRR6045519 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6045399 | Other | None | SRR6046460 | HR-TB | None | ERR4830353 | Other | None | SRR6485006 | HR-TB | lineage2.2.1 | None | SRR6485108 | Sensitive | lineage4.8 | None | SRR6485045 | Other | lineage2.2.1 | None | SRR6485056 | Sensitive | lineage2.2.1 | None | SRR6485078 | MDR-TB | lineage2.2.1 | None | SRR6485086 | Sensitive | lineage2.2.1 | None | SRR6369875 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485050 | Other | lineage2.2.1 | None | SRR6485115 | Sensitive | lineage2.2.1 | None | SRR6484899 | HR-TB | lineage2.2.1 | None | SRR6485146 | MDR-TB | lineage4.8 | None | SRR6484833 | Sensitive | lineage4.3.3 | None | SRR6484852 | Sensitive | lineage4.2.1 | None | SRR6484885 | Sensitive | lineage4.1.2.1 | None | SRR6485130 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484830 | Sensitive | lineage2.2.1 | None | SRR6484892 | Sensitive | lineage4.1.2.1 | None | SRR6484982 | MDR-TB | lineage2.2.1 | None | SRR6484955 | HR-TB | lineage4.3.3 | None | SRR6785155 | HR-TB | lineage4.3;lineage2.2.1 | None | ERR3170401 | Sensitive | lineage5.3 | None | SRR6785150 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785187 | Sensitive | lineage4.2.1 | None | SRR6785165 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6785159 | Sensitive | lineage4.3.3 | None | SRR6785287 | Sensitive | lineage4.3.3 | None | SRR6785240 | Sensitive | lineage4.3.3 | None | SRR6785243 | HR-TB | lineage4.3.3 | None | SRR6785346 | Sensitive | lineage2.2.1 | None | SRR6785289 | MDR-TB | lineage2.2.1 | None | SRR6785323 | Sensitive | lineage4.8 | None | SRR6785383 | Sensitive | lineage4.8 | None | SRR6785406 | Sensitive | lineage4.8 | None | SRR6785402 | Sensitive | lineage2.2.1 | None | SRR6785407 | Sensitive | lineage4.8 | None | SRR6785408 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785400 | Sensitive | lineage4.8 | None | SRR6785478 | Sensitive | lineage4.2.1 | None | SRR6785428 | Sensitive | lineage4.1 | None | SRR6785481 | Sensitive | lineage4.1 | None | SRR6785477 | HR-TB | lineage2.2.1 | None | SRR6785504 | Sensitive | lineage4.8 | None | SRR6785514 | Other | lineage2.2 | None | SRR6785503 | HR-TB | lineage2.2.1 | None | SRR6785509 | Sensitive | lineage4.3.3 | None | SRR6785515 | Sensitive | lineage4.3.3 | None | SRR6785519 | Sensitive | lineage2.2.1 | None | SRR6785522 | Sensitive | lineage2.2.1 | None | SRR6785517 | Other | lineage2.2 | None | SRR6785525 | HR-TB | lineage4.8 | None | SRR8571817 | Sensitive | lineage4.9 | None | SRR6785538 | MDR-TB | lineage2.2.1 | None | SRR6785547 | Sensitive | lineage4.2.1 | None | SRR8571813 | Sensitive | lineage4.9 | None | SRR6982020 | HR-TB | lineage4.1.2 | None | SRR6855913 | Sensitive | lineage4.4.1.1.1 | None | SRR8571816 | Sensitive | lineage4.9 | None | SRR8571815 | Sensitive | lineage4.9 | None | ERR11043587 | MDR-TB | lineage2.2.1 | None | SRR8571814 | Sensitive | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | SRR8571812 | Sensitive | lineage4.9 | None | ERR11043746 | Pre-XDR-TB | lineage2.2.1 | None | ERR1194798 | Other | lineage2.2.1 | None | ERR1194804 | Other | lineage2.2.1 | None | ERR1194802 | Other | lineage2.2.1 | None | ERR1194808 | HR-TB | lineage2.2.1 | None | ERR1194801 | Other | lineage2.2.1 | None | ERR1194803 | Other | lineage2.2.1 | None | ERR3639764 | Pre-XDR-TB | lineage2.2.1 | None | ERR1194809 | HR-TB | lineage2.2.1 | None | ERR1194811 | Other | lineage2.2.1 | None | ERR1194817 | HR-TB | lineage2.2 | None | ERR3639823 | MDR-TB | lineage2.2.1 | None | ERR3639821 | Pre-XDR-TB | lineage4.3.3 | None | ERR3639822 | MDR-TB | lineage3 | None | ERR3639783 | MDR-TB | lineage4.8 | None | ERR3639798 | MDR-TB | lineage2.2.1 | None | ERR3794383 | MDR-TB | lineage2.2.1 | None | ERR3794445 | MDR-TB | lineage2.2.1 | None | ERR3794485 | Pre-XDR-TB | lineage2.2.1 | None | ERR4162017 | Sensitive | lineage5.1.1 | None | ERR3794520 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794502 | MDR-TB | lineage2.2.1 | None | ERR4162005 | Sensitive | lineage5.1.5 | None | ERR4162028 | Sensitive | lineage5.1.1 | None | ERR7910937 | MDR-TB | lineage4.2.1 | None | ERR7910847 | HR-TB | lineage4.1.1 | None | ERR7910941 | MDR-TB | lineage2.2.1 | None | ERR5979463 | MDR-TB | lineage3 | None | ERR7910992 | Sensitive | lineage4.8 | None | SRR16370489 | MDR-TB | lineage4.3.4.2 | None | ERR7911009 | MDR-TB | lineage4.3.3 | None | SRR16370472 | HR-TB | lineage4.8 | None | ERR789234 | XDR-TB | lineage2.2.1 | None | ERR789235 | XDR-TB | lineage2.2.1 | None | SRR16370500 | MDR-TB | lineage4.1.2.1 | None | SRR16370493 | MDR-TB | lineage4.3.3 | None | SRR16370497 | Pre-XDR-TB | lineage4.3.3 | None | SRR16370492 | MDR-TB | lineage4.3.4.2 | None | SRR16370509 | MDR-TB | lineage4.1.2.1 | None | ERR1950004 | HR-TB | lineage4 | None | SRR16370510 | MDR-TB | lineage4.3.3 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR2228941 | Other | lineage4.8 | None | ERR2228948 | Sensitive | lineage4.8 | None | ERR1949964 | Other | lineage4.8 | None | ERR1949972 | Sensitive | lineage4.8 | None | ERR1949990 | Sensitive | lineage4.8 | None | ERR11082004 | Pre-XDR-TB | lineage4.3.3 | None | SRR3675488 | HR-TB | None | ERR2228954 | Sensitive | lineage4.8 | None | ERR1949953 | RR-TB | lineage4 | None | ERR1949959 | Sensitive | lineage4.8 | None | ERR1949999 | Sensitive | lineage4.8 | None | ERR1950020 | Sensitive | lineage4.8 | None | ERR1950047 | Sensitive | lineage4.8 | None | ERR1950023 | Sensitive | lineage4.8 | None | ERR2229556 | Sensitive | lineage4.8 | None | ERR1950040 | Sensitive | lineage4.8 | None | ERR1950027 | Sensitive | lineage4.8 | None | ERR1950035 | Sensitive | lineage4.8 | None | ERR1950039 | Sensitive | lineage4.8 | None | ERR1950085 | RR-TB | lineage4.8 | None | ERR1950069 | Sensitive | lineage4.8 | None | ERR1950064 | Other | lineage4 | None | ERR1950070 | Sensitive | lineage4.8 | None | ERR1950081 | Sensitive | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228793 | Sensitive | lineage4.8 | None | ERR2228808 | Sensitive | lineage4.8 | None | ERR1950089 | Sensitive | lineage4.8 | None | ERR2228789 | Sensitive | lineage4.8 | None | ERR2228820 | Sensitive | lineage4.8 | None | ERR2228814 | Sensitive | lineage4.8 | None | ERR2228821 | Sensitive | lineage4.8 | None | ERR2228874 | Other | lineage4 | None | ERR2228828 | Other | lineage4.8 | None | ERR2228826 | Sensitive | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228829 | Sensitive | lineage4.8 | None | ERR2228840 | Sensitive | lineage4.8 | None | ERR2228873 | Other | lineage4.8 | None | ERR2228915 | Sensitive | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | ERR2245286 | HR-TB | lineage3.1.1 | None | ERR2245283 | Other | lineage3.1.1 | None | ERR2245358 | Sensitive | lineage4.9 | None | ERR2245357 | Sensitive | lineage3.1.1 | None | ERR2245351 | Sensitive | lineage3 | None | ERR2245355 | Sensitive | lineage3.1.1 | None | ERR2245359 | Sensitive | lineage4.9 | None | ERR2245360 | Sensitive | lineage3.1.1 | None |
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