lineage | Count |
---|---|
lineage2.2.1 | 73 |
lineage4.2.1.1 | 2 |
lineage2.2.2 | 4 |
lineage4.3.4.2.1 | 4 |
lineage4.1.1 | 4 |
lineage1.1.2 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2 | 2 |
lineage4.6.1.1 | 1 |
lineage4.4.2 | 2 |
lineage4.1.1.3 | 2 |
spoligotype | Count |
---|---|
None | 96 |
ID | Drug resistance | Lineage | Country iso2 | SAMN02403469 | MDR-TB | lineage2.2.1 | za | SRR5153920 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR2677441 | Pre-XDR-TB | lineage2.2.1 | de | SAMN02360616 | Pre-XDR-TB | lineage2.2.2 | kr | SRR5152902 | MDR-TB | lineage2.2.1 | None | SAMN02403468 | Pre-XDR-TB | lineage2.2.1 | za | ERR2677389 | Pre-XDR-TB | lineage2.2.1 | de | ERR2510798 | Pre-XDR-TB | lineage2.2.1 | it | ERR2515917 | MDR-TB | lineage4.3.4.2.1 | za | ERR2677386 | Pre-XDR-TB | lineage2.2.1 | de | ERR4819358 | Pre-XDR-TB | lineage2.2.1 | gb | SAMEA2534761 | MDR-TB | lineage2.2.1 | uz | ERR2516010 | MDR-TB | lineage4.3.4.2.1 | za | ERR2516060 | MDR-TB | lineage4.3.4.2.1 | za | ERR4822388 | Pre-XDR-TB | lineage2.2.1 | kg | SRR5709808 | MDR-TB | lineage2.2.1 | th | SAMEA2534907 | MDR-TB | lineage2.2.1 | uz | ERR2516028 | Sensitive | lineage4.1.1 | None | ERR4822306 | Pre-XDR-TB | lineage2.2.1 | de | SRR5709875 | MDR-TB | lineage2.2.1 | th | ERR4829894 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829954 | Pre-XDR-TB | lineage1.1.2 | None | ERR4829050 | Pre-XDR-TB | lineage2.2.1 | it | SRR7131232 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828795 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828991 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414963 | MDR-TB | lineage2.2.1 | se | ERR4828810 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855852 | Sensitive | lineage4.1.1 | None | SRR7131187 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517806 | MDR-TB | lineage2.2.1 | ch | SRR8651644 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR11043262 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797234 | MDR-TB | lineage2.2.1 | in | ERR11043600 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043760 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043785 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044323 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044470 | Pre-XDR-TB | lineage2.2.1 | None | ERR133845 | Pre-XDR-TB | lineage2.2.1 | ru | ERR3273163 | MDR-TB | lineage2.2.1 | None | ERR11043954 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276893 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865389 | MDR-TB | lineage2.2.1 | None | ERR5865388 | MDR-TB | lineage2.2.1 | None | ERR5865391 | MDR-TB | lineage2.2 | None | ERR5865387 | MDR-TB | lineage2.2.1 | None | ERR5866156 | MDR-TB | lineage2.2.1 | None | ERR5865390 | MDR-TB | lineage2.2.1 | None | ERR5865478 | MDR-TB | lineage2.2.1 | None | ERR5865479 | MDR-TB | lineage2.2.1 | None | ERR5866155 | MDR-TB | lineage2.2.1 | None | ERR5866154 | MDR-TB | lineage2.2.1 | None | ERR5918066 | MDR-TB | lineage4.3.4.2.1 | za | SRR1162825 | MDR-TB | lineage2.2.1 | None | ERR7911425 | MDR-TB | lineage2.2.1 | us | ERR8665582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013683 | Pre-XDR-TB | lineage2.2 | None | SRR1013682 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049068 | Pre-XDR-TB | lineage2.2.2 | None | ERR6358835 | RR-TB | lineage4.6.1.1 | None | ERR7911643 | Pre-XDR-TB | lineage4.1.1 | za | SRR1049069 | Pre-XDR-TB | lineage2.2.2 | None | SRR1166820 | MDR-TB | lineage2.2.1 | None | SRR1165220 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167297 | Pre-XDR-TB | lineage2.2.1 | None | SRR22048546 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173266 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067642 | MDR-TB | lineage2.2.1 | None | SRR1180926 | MDR-TB | lineage2.2.1 | None | SRR1181050 | MDR-TB | lineage2.2.1 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR22048485 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173211 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR14782256 | MDR-TB | lineage4.2.1.1 | None | SRR15368792 | Pre-XDR-TB | lineage4.4.2 | None | SRR21277863 | Pre-XDR-TB | lineage4.4.2 | None | ERR11081089 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068842 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068882 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068879 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082550 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082474 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082204 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082202 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082340 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082559 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025662 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11082872 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082906 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243556 | MDR-TB | lineage2.2.1 | None | ERR11138657 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806985 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806871 | Pre-XDR-TB | lineage4.1.1 | None | SRR21887693 | MDR-TB | lineage2.2.1 | None |
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