Rv3457c - p.Ala180Val
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
54 MDR-TB
78 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 109 |
| lineage2.2.2 | 5 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.3.2 | 1 |
| lineage4.2.1.1 | 2 |
| La3;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 135 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11082340 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284027 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360616 | Pre-XDR-TB | lineage2.2.2 | kr | SRR28706679 | MDR-TB | lineage2.2.1 | None | ERR4822306 | Pre-XDR-TB | lineage2.2.1 | de | SRR28394015 | MDR-TB | lineage4.3.3 | None | ERR5866156 | MDR-TB | lineage2.2.1 | None | ERR4829050 | Pre-XDR-TB | lineage2.2.1 | it | ERR7911425 | MDR-TB | lineage2.2.1 | us | ERR8665582 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865478 | MDR-TB | lineage2.2.1 | None | ERR6358835 | RR-TB | lineage4.6.1.1 | None | SRR22048485 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677386 | Pre-XDR-TB | lineage2.2.1 | de | ERR2677389 | Pre-XDR-TB | lineage2.2.1 | de | ERR4819358 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516010 | MDR-TB | lineage4.3.4.2.1 | za | ERR2516060 | MDR-TB | lineage4.3.4.2.1 | za | SRR21277863 | Pre-XDR-TB | lineage4.4.2 | None | ERR133845 | Pre-XDR-TB | lineage2.2.1 | ru | ERR11043600 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044323 | Pre-XDR-TB | lineage2.2.1 | None | SRR28858471 | MDR-TB | lineage2.2.1 | None | ERR552604 | MDR-TB | lineage2.2.1 | None | SRR1173211 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043262 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866154 | MDR-TB | lineage2.2.1 | None | ERR5865391 | MDR-TB | lineage2.2.1 | None | ERR11068879 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829894 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068882 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044470 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131232 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273163 | MDR-TB | lineage2.2.1 | None | ERR13290584 | MDR-TB | lineage2.2.1 | None | ERR4276893 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887693 | MDR-TB | lineage2.2.1 | None | SRR1013683 | Pre-XDR-TB | lineage2.2.2 | None | ERR13290582 | MDR-TB | lineage2.2.1 | None | ERR11043954 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290583 | MDR-TB | lineage2.2.1 | None | ERR13276340 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162825 | MDR-TB | lineage2.2.1 | None | ERR13290585 | MDR-TB | lineage2.2.1 | None | ERR11043760 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797234 | MDR-TB | lineage2.2.1 | in | ERR13284037 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068842 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165220 | Pre-XDR-TB | lineage2.2.1 | None | ERR5918066 | MDR-TB | lineage4.3.4.2.1 | za | ERR4828795 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911643 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR4828991 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829954 | Pre-XDR-TB | lineage1.1.2 | None | SAMEA2534761 | MDR-TB | lineage2.2.1 | uz | SAMEA2534907 | MDR-TB | lineage2.2.1 | uz | SRR5709875 | MDR-TB | lineage2.2.1 | th | SRR5709808 | MDR-TB | lineage2.2.1 | th | ERR13276143 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276168 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284853 | MDR-TB | lineage2.2.1 | None | SRR1013682 | Pre-XDR-TB | lineage2.2.2 | None | ERR11043785 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865479 | MDR-TB | lineage2.2.1 | None | SAMN02403468 | Pre-XDR-TB | lineage2.2.1 | za | SAMN02403469 | MDR-TB | lineage2.2.1 | za | ERR5865390 | MDR-TB | lineage2.2.1 | None | ERR552790 | MDR-TB | lineage2.2.1 | None | ERR11243556 | MDR-TB | lineage2.2.1 | None | ERR2515917 | MDR-TB | lineage4.3.4.2.1 | za | ERR9806985 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11082204 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082872 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284069 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082906 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276285 | Pre-XDR-TB | lineage2.2.1 | None | ERR13278946 | Pre-XDR-TB | lineage2.2.1 | None | ERR552790_ERR552791 | MDR-TB | lineage2.2.1 | None | SRR25905990 | MDR-TB | lineage4.3.3 | None | ERR11082550 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267114 | XDR-TB | lineage2.2.1 | None | SRR27069391 | MDR-TB | lineage2.2.1.1 | None | ERR13276351 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276399 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049068 | Pre-XDR-TB | lineage2.2.2 | None | SRR22048546 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488609 | MDR-TB | lineage4.3.2 | None | SRR5153920 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR13232510 | MDR-TB | lineage2.2.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SRR1049069 | Pre-XDR-TB | lineage2.2.2 | None | ERR9806871 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR11067642 | MDR-TB | lineage2.2.1 | None | SAMN02414963 | MDR-TB | lineage2.2.1 | se | ERR13281469 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181050 | HR-TB | lineage2.2.1 | None | SRR27069366 | MDR-TB | lineage2.2.1.1 | None | SRR14782256 | MDR-TB | lineage4.2.1.1 | None | SRR15368792 | Pre-XDR-TB | lineage4.4.2 | None | ERR11082202 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517806 | MDR-TB | lineage2.2.1 | ch | ERR13281458 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677441 | Pre-XDR-TB | lineage2.2.1 | de | ERR11081089 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510798 | Pre-XDR-TB | lineage2.2.1 | it | SRR8651644 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR5865387 | MDR-TB | lineage2.2.1 | None | ERR11082474 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866155 | MDR-TB | lineage2.2.1 | None | ERR552603_ERR552604 | MDR-TB | lineage2.2.1 | None | SRR1173266 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180926 | MDR-TB | lineage2.2.1 | None | ERR5865389 | MDR-TB | lineage2.2.1 | None | ERR5865388 | MDR-TB | lineage2.2.1 | None | ERR13284774 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828810 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167297 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131187 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152902 | MDR-TB | lineage2.2.1 | None | ERR13266831 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276402 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082559 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267510 | Pre-XDR-TB | lineage2.2.1 | None | ERR552791 | MDR-TB | lineage2.2.1 | None | ERR552603 | MDR-TB | lineage2.2.1 | None | ERR13276125 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267509 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307461 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284032 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR8025662 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11138657 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166820 | MDR-TB | lineage2.2.1 | None | ERR4822388 | Pre-XDR-TB | lineage2.2.1 | kg |
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