lineage | Count |
---|---|
lineage4.6.1.2 | 80 |
lineage2.2.1.1 | 1 |
lineage4.1.2 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.7 | 1 |
lineage2.2.1 | 24 |
lineage1.1.3.1 | 1 |
lineage1.1.1.1 | 2 |
lineage4.8 | 6 |
lineage4.3.3 | 5 |
lineage1.1.1 | 1 |
lineage1.1.2 | 5 |
lineage4.3.4.2 | 1 |
lineage4.6.1.2;lineage4.8.1 | 1 |
lineage1.2.1.2 | 1 |
lineage3 | 2 |
lineage4.3.4.2.1 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage4.2.1 | 1 |
lineage4.1.1.3 | 3 |
spoligotype | Count |
---|---|
None | 140 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358822 | MDR-TB | lineage4.6.1.2 | None | ERR6358829 | MDR-TB | lineage4.6.1.2 | None | ERR6359100 | MDR-TB | lineage4.6.1.2 | None | SRR29772431 | MDR-TB | lineage2.2.1.1 | None | ERR6358833 | MDR-TB | lineage4.6.1.2 | None | ERR6359035 | MDR-TB | lineage4.6.1.2 | None | SRR28393336 | MDR-TB | lineage4.6.1.2 | None | ERR6359086 | MDR-TB | lineage4.6.1.2 | None | ERR6359057 | MDR-TB | lineage4.6.1.2 | None | ERR9119701 | MDR-TB | lineage4.1.2 | None | ERR6358962 | MDR-TB | lineage4.6.1.2 | None | ERR6358973 | MDR-TB | lineage4.6.1.2 | None | SRR29081024 | MDR-TB | lineage1.2.1.2.1 | None | ERR6359120 | RR-TB | lineage4.7 | None | SAMEA2534283 | MDR-TB | lineage2.2.1 | uz | SRR12420405 | MDR-TB | lineage2.2.1 | None | ERR6358756 | MDR-TB | lineage4.6.1.2 | None | SRR24256227 | RR-TB | lineage2.2.1 | None | ERR6358922 | MDR-TB | lineage4.6.1.2 | None | ERR2124077 | MDR-TB | lineage4.6.1.2 | None | ERR6358931 | MDR-TB | lineage4.6.1.2 | None | ERR6359096 | MDR-TB | lineage4.6.1.2 | None | ERR11488774 | MDR-TB | lineage1.1.3.1 | None | ERR6358980 | MDR-TB | lineage4.6.1.2 | None | ERR6358958 | MDR-TB | lineage4.6.1.2 | None | ERR9119446 | MDR-TB | lineage1.1.1.1 | None | ERR5865569 | MDR-TB | lineage4.8 | None | SRR12420642 | MDR-TB | lineage2.2.1 | None | ERR6359131 | MDR-TB | lineage4.6.1.2 | None | SRR6484934 | MDR-TB | lineage2.2.1 | None | SRR26331640 | RR-TB | lineage2.2.1 | None | ERR551128_ERR551129 | MDR-TB | lineage4.8 | None | ERR6359123 | MDR-TB | lineage4.6.1.2 | None | ERR6358818 | MDR-TB | lineage4.6.1.2 | None | SRR18054786 | MDR-TB | lineage2.2.1 | None | ERR6358739 | MDR-TB | lineage4.6.1.2 | None | SRR8651574 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6358947 | MDR-TB | lineage4.6.1.2 | None | ERR6358965 | MDR-TB | lineage4.6.1.2 | None | ERR9119918 | MDR-TB | lineage4.3.3 | None | SRR11662619 | MDR-TB | lineage1.1.1 | None | ERR1035335 | MDR-TB | lineage4.3.3 | br | ERR6359061 | MDR-TB | lineage4.6.1.2 | None | ERR3132276 | MDR-TB | lineage4.6.1.2 | None | ERR6359098 | MDR-TB | lineage4.6.1.2 | None | ERR6359047 | MDR-TB | lineage4.6.1.2 | None | ERR6359049 | MDR-TB | lineage4.6.1.2 | None | ERR551909 | MDR-TB | lineage2.2.1 | None | ERR551467_ERR551466 | MDR-TB | lineage2.2.1 | None | ERR551909_ERR551910 | MDR-TB | lineage2.2.1 | None | ERR6358731 | MDR-TB | lineage4.6.1.2 | None | SAMEA2533962 | MDR-TB | lineage2.2.1 | uz | ERR6358933 | MDR-TB | lineage4.6.1.2 | None | ERR2510605 | Pre-XDR-TB | lineage1.1.2 | None | ERR6359059 | MDR-TB | lineage4.6.1.2 | None | ERR1035263 | MDR-TB | lineage4.3.3 | br | ERR6358819 | MDR-TB | lineage4.6.1.2 | None | ERR2864257 | MDR-TB | lineage4.3.4.2 | pt | ERR6358926 | MDR-TB | lineage4.6.1.2 | None | SAMEA2533722 | MDR-TB | lineage4.8 | uz | SRR25515810 | MDR-TB | lineage2.2.1 | None | ERR6358723 | MDR-TB | lineage4.6.1.2 | None | ERR4830440 | MDR-TB | lineage1.1.1.1 | vn | ERR5865568 | MDR-TB | lineage4.8 | None | ERR6358832 | MDR-TB | lineage4.6.1.2 | None | ERR6358830 | MDR-TB | lineage4.6.1.2 | None | ERR6358971 | MDR-TB | lineage4.6.1.2 | None | ERR6358994 | MDR-TB | lineage4.6.1.2 | None | ERR6358963 | MDR-TB | lineage4.6.1.2 | None | ERR6358914 | MDR-TB | lineage4.6.1.2 | None | ERR6358762 | MDR-TB | lineage4.6.1.2;lineage4.8.1 | None | ERR6358709 | MDR-TB | lineage4.6.1.2 | None | SRR21031687 | MDR-TB | lineage2.2.1 | None | ERR144634 | MDR-TB | lineage2.2.1 | ru | ERR6358740 | MDR-TB | lineage4.6.1.2 | None | ERR3078005 | MDR-TB | lineage4.6.1.2 | None | ERR6358770 | MDR-TB | lineage4.6.1.2 | None | ERR551129 | MDR-TB | lineage4.8 | None | ERR2516562 | MDR-TB | lineage1.2.1.2 | nl | ERR2510316 | MDR-TB | lineage1.1.2 | pk | ERR2510402 | Pre-XDR-TB | lineage3 | pk | ERR6359029 | MDR-TB | lineage4.6.1.2 | None | ERR4596925 | RR-TB | lineage4.3.4.2.1 | None | ERR6358908 | MDR-TB | lineage4.6.1.2 | None | SRR25534269 | MDR-TB | lineage2.2.1 | None | ERR6358715 | MDR-TB | lineage4.6.1.2 | None | ERR1213939 | MDR-TB | lineage2.2.1;lineage4.3.3 | pe | ERR6358788 | MDR-TB | lineage4.6.1.2 | None | ERR6359027 | MDR-TB | lineage4.6.1.2 | None | SRR28045934 | MDR-TB | lineage1.1.2 | None | SRR29772762 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772535 | RR-TB | lineage3 | None | SRR29772712 | MDR-TB | lineage1.1.2 | None | ERR1035339 | MDR-TB | lineage4.3.3 | br | ERR6358725 | MDR-TB | lineage4.6.1.2 | None | ERR6358766 | MDR-TB | lineage4.6.1.2 | None | ERR6358943 | MDR-TB | lineage4.6.1.2 | None | ERR6359068 | MDR-TB | lineage4.6.1.2 | None | ERR6359017 | MDR-TB | lineage4.6.1.2 | None | ERR6358769 | MDR-TB | lineage4.6.1.2 | None | ERR551128 | MDR-TB | lineage4.8 | None | ERR6358800 | MDR-TB | lineage4.6.1.2 | None | ERR11773790 | MDR-TB | lineage4.2.1 | None | SRR25206944 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510593 | HR-TB | lineage1.1.2 | None | ERR551910 | MDR-TB | lineage2.2.1 | None | ERR6358810 | MDR-TB | lineage4.6.1.2 | None | ERR6358745 | MDR-TB | lineage4.6.1.2 | None | ERR6359091 | MDR-TB | lineage4.6.1.2 | None | ERR6359092 | MDR-TB | lineage4.6.1.2 | None | ERR2516333 | MDR-TB | lineage4.6.1.2 | be | ERR5987278 | MDR-TB | lineage4.1.2 | None | ERR6358955 | MDR-TB | lineage4.6.1.2 | None | ERR6359129 | MDR-TB | lineage4.6.1.2 | None | ERR6358919 | MDR-TB | lineage4.6.1.2 | None | ERR6358799 | MDR-TB | lineage4.6.1.2 | None | ERR6359053 | MDR-TB | lineage4.6.1.2 | None | ERR6359103 | MDR-TB | lineage4.6.1.2 | None | SRR16156194 | RR-TB | lineage4.1.1.3 | None | ERR6358734 | MDR-TB | lineage4.6.1.2 | None | SRR16156238 | RR-TB | lineage4.1.1.3 | None | ERR6358989 | MDR-TB | lineage4.6.1.2 | None | ERR551466 | MDR-TB | lineage2.2.1 | None | ERR6358759 | MDR-TB | lineage4.6.1.2 | None | ERR6362124 | MDR-TB | lineage4.3.3 | None | ERR6359083 | MDR-TB | lineage4.6.1.2 | None | ERR6358792 | MDR-TB | lineage4.6.1.2 | None | ERR6359040 | MDR-TB | lineage4.6.1.2 | None | ERR6358930 | MDR-TB | lineage4.6.1.2 | None | SRR16156206 | RR-TB | lineage4.1.1.3 | None | ERR4811302 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6359011 | MDR-TB | lineage4.6.1.2 | None | ERR234670 | MDR-TB | lineage2.2.1 | None | ERR6359041 | MDR-TB | lineage4.6.1.2 | None | ERR6358924 | MDR-TB | lineage4.6.1.2 | None | ERR6359000 | MDR-TB | lineage4.6.1.2 | None | ERR551467 | MDR-TB | lineage2.2.1 | None | ERR6358735 | MDR-TB | lineage4.6.1.2 | None | ERR6359097 | MDR-TB | lineage4.6.1.2 | None | ERR552226 | MDR-TB | lineage2.2.1 | None |
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