lineage | Count |
---|---|
lineage4.6.1.1 | 17 |
lineage4.1.3 | 1 |
lineage4.1.2.1 | 4 |
lineage2.2.1 | 11 |
lineage4.6.2.2 | 2 |
lineage2.2 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.7 | 1 |
lineage4.8 | 3 |
1 | |
lineage5 | 4 |
lineage4.4 | 1 |
lineage4.3.3 | 21 |
lineage4.4.1.1 | 1 |
lineage4.9 | 32 |
lineage1.1.1 | 1 |
lineage4.5 | 1 |
lineage3 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 105 |
ID | Drug resistance | Lineage | Country iso2 | ERR1199094 | HR-TB | lineage4.6.1.1 | ug | ERR2679284 | MDR-TB | lineage4.1.3 | None | ERR133971 | Sensitive | lineage4.1.2.1 | ru | DRR473687 | Sensitive | lineage2.2.1 | None | ERR4872256 | RR-TB | lineage4.6.2.2 | None | ERR4831724 | HR-TB | lineage2.2 | None | SRR6797583 | Sensitive | lineage3;lineage2.2.1 | None | SRR6832676 | HR-TB | lineage4.7 | None | ERR4816072 | Sensitive | lineage4.6.1.1 | gb | DRR473935 | Sensitive | lineage2.2.1 | None | DRR474157 | Sensitive | lineage2.2.1 | None | SRR7131161 | Other | lineage4.8 | None | ERR3132256 | RR-TB | lineage4.6.1.1 | None | DRR189067 | MDR-TB | lineage2.2.1 | None | SRR7535055 | HR-TB | lineage4.6.1.1 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535069 | HR-TB | lineage4.6.1.1 | None | SRR7535086 | Other | None | ERR4192407 | Sensitive | lineage5 | None | ERR2514853 | Sensitive | lineage4.4 | gb | ERR4192386 | Sensitive | lineage5 | None | SRR16088498 | Sensitive | lineage4.3.3 | None | ERR133965 | Sensitive | lineage4.1.2.1 | ru | ERR4192544 | Sensitive | lineage5 | None | ERR5918147 | Sensitive | lineage4.4.1.1 | za | ERR5637121 | Sensitive | lineage4.9 | None | SRR16088501 | Sensitive | lineage4.3.3 | None | ERR987727 | HR-TB | lineage4.6.1.1 | None | SRR16088260 | Sensitive | lineage4.3.3 | None | ERR9119648 | RR-TB | lineage4.6.2.2 | None | ERR987764 | HR-TB | lineage4.6.1.1 | None | SRR032219 | Sensitive | lineage4.9 | None | SRR034933 | Sensitive | lineage4.9 | None | SRR031309 | Sensitive | lineage4.9 | None | SRR031310 | Sensitive | lineage4.9 | None | SRR034934 | Sensitive | lineage4.9 | None | SRR031346 | Sensitive | lineage4.9 | None | SRR031312 | Sensitive | lineage4.9 | None | SRR031313 | Sensitive | lineage4.9 | None | SRR032220 | Sensitive | lineage4.9 | None | SRR031314 | Sensitive | lineage4.9 | None | SRR034935 | Sensitive | lineage4.9 | None | SRR032221 | Sensitive | lineage4.9 | None | SRR1173404 | Sensitive | lineage4.6.1.1 | None | SRR11033765 | Sensitive | lineage4.3.3 | None | SRR1173835 | Sensitive | lineage4.6.1.1 | None | SRR16088435 | Sensitive | lineage4.3.3 | None | SRR16088355 | Sensitive | lineage4.3.3 | None | SRR12199477 | Sensitive | lineage1.1.1 | None | SRR15316402 | RR-TB | lineage2.2.1 | None | SRR158091 | Sensitive | lineage4.9 | None | SRR158090 | Sensitive | lineage4.9 | None | SRR158094 | Sensitive | lineage4.9 | None | SRR16370578 | HR-TB | lineage4.6.1.1 | None | SRR16115082 | Sensitive | lineage4.1.2.1 | None | SRR16088512 | Sensitive | lineage4.3.3 | None | SRR18715482 | Sensitive | lineage4.3.3 | None | SRR18548954 | Sensitive | lineage4.5 | None | SRR18715261 | Sensitive | lineage4.3.3 | None | SRR18715384 | Sensitive | lineage4.3.3 | None | SRR19317586 | HR-TB | lineage4.6.1.1 | None | SRR18910201 | Sensitive | lineage2.2.1 | None | SRR18911867 | Sensitive | lineage4.1.2.1 | None | ERR11243499 | Sensitive | lineage4.3.3 | None | SRR24673513 | Sensitive | lineage4.3.3 | None | SRR23861807 | Sensitive | lineage4.3.3 | None | SRR23862033 | Sensitive | lineage4.3.3 | None | SRR22248487 | Pre-XDR-TB | lineage4.8 | None | ERR11082238 | Sensitive | lineage3 | None | ERR11082335 | Sensitive | lineage5 | None | SRR23861881 | Sensitive | lineage4.3.3 | None | SRR25515759 | Sensitive | lineage2.2.1 | None | SRR24673514 | Sensitive | lineage4.3.3 | None | SRR25515086 | Sensitive | lineage2.2.1 | None | SRR24799242 | Sensitive | lineage4.3.3 | None | SRR25515341 | Sensitive | lineage2.2.1 | None | SRR28239634 | Sensitive | lineage4.3.3 | None | SRR28239741 | Other | lineage4.3.3 | None | SRR1723444 | Sensitive | lineage2.2.1 | cn | SRR28239967 | Sensitive | lineage4.3.3 | None | SRR28240065 | Sensitive | lineage4.3.3 | None | SRR326099 | Sensitive | lineage4.9 | None | SRR326074 | Sensitive | lineage4.9 | None | SRR326100 | Sensitive | lineage4.9 | None | SRR326083 | Sensitive | lineage4.9 | None | SRR326136 | Sensitive | lineage4.9 | None | SRR326103 | Sensitive | lineage4.9 | None | SRR326140 | Sensitive | lineage4.9 | None | SRR326128 | Sensitive | lineage4.9 | None | SRR326112 | Sensitive | lineage4.9 | None | SRR326120 | Sensitive | lineage4.9 | None | SRR326149 | Sensitive | lineage4.9 | None | SRR326134 | Sensitive | lineage4.9 | None | SRR326138 | Sensitive | lineage4.9 | None | SRR326148 | Sensitive | lineage4.9 | None | SRR326147 | Sensitive | lineage4.9 | None | SRR326146 | Sensitive | lineage4.9 | None | SRR6824665 | Sensitive | lineage2.2.1 | cn | ERR1199138 | HR-TB | lineage4.6.1.1 | ug | ERR4817672 | Other | lineage1.1.2 | None | ERR4817708 | Sensitive | lineage4.8 | None | ERR230054 | Sensitive | lineage4.6.1.1 | None | SAMN02567683 | Sensitive | lineage4.6.1.1 | ug | SRR2100679 | Sensitive | lineage4.6.1.1 | None | ERR1199071 | HR-TB | lineage4.6.1.1 | ug |
---|