lineage | Count |
---|---|
lineage3.1 | 1 |
lineage4.8 | 5 |
lineage4.3.3 | 21 |
lineage4.6.1.1 | 18 |
lineage4.1.2.1 | 4 |
lineage2.2.1 | 13 |
lineage5 | 4 |
lineage1.1.2 | 1 |
lineage4.5 | 1 |
lineage3 | 1 |
lineage4.4.1.1 | 1 |
1 | |
lineage4.1.3 | 1 |
lineage4.6.2.2 | 2 |
lineage4.4 | 1 |
lineage4.7 | 2 |
lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | SRR28858606 | Sensitive | lineage3.1 | None | ERR13110305 | Sensitive | lineage4.8 | None | SRR23861881 | Sensitive | lineage4.3.3 | None | SRR7069115 | Sensitive | lineage4.6.1.1 | None | ERR1199094 | HR-TB | lineage4.6.1.1 | ug | ERR3132256 | RR-TB | lineage4.6.1.1 | None | SRR18911867 | Sensitive | lineage4.1.2.1 | None | SRR18715261 | Sensitive | lineage4.3.3 | None | SRR15316402 | RR-TB | lineage2.2.1 | None | ERR4192386 | Sensitive | lineage5 | None | ERR133965 | Sensitive | lineage4.1.2.1 | ru | SRR6824665 | Sensitive | lineage2.2.1 | cn | ERR4817708 | Sensitive | lineage4.8 | None | SRR29681337 | Sensitive | lineage4.8 | None | SRR7535055 | HR-TB | lineage4.6.1.1 | None | ERR987764 | HR-TB | lineage4.6.1.1 | None | ERR133971 | Sensitive | lineage4.1.2.1 | ru | ERR4817672 | Other | lineage1.1.2 | None | SRR18548954 | Sensitive | lineage4.5 | None | ERR13264843 | Sensitive | lineage2.2.1 | None | ERR11775692 | Sensitive | lineage4.3.3 | None | ERR4192544 | Sensitive | lineage5 | None | SRR29053409 | HR-TB | lineage4.6.1.1 | None | SRR18715384 | Sensitive | lineage4.3.3 | None | SRR25515759 | Sensitive | lineage2.2.1 | None | DRR189067 | MDR-TB | lineage2.2.1 | None | SRR16088435 | Sensitive | lineage4.3.3 | None | ERR4192407 | Sensitive | lineage5 | None | ERR1199071 | HR-TB | lineage4.6.1.1 | ug | ERR11082238 | Sensitive | lineage3 | None | ERR1199138 | HR-TB | lineage4.6.1.1 | ug | DRR473935 | Sensitive | lineage2.2.1 | None | SRR16088260 | Sensitive | lineage4.3.3 | None | SRR24799242 | Sensitive | lineage4.3.3 | None | ERR11243499 | Sensitive | lineage4.3.3 | None | SRR16088512 | Sensitive | lineage4.3.3 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR16088498 | Sensitive | lineage4.3.3 | None | SRR16088501 | Sensitive | lineage4.3.3 | None | SRR22248487 | Pre-XDR-TB | lineage4.8 | None | ERR5918147 | Sensitive | lineage4.4.1.1 | za | SRR7535086 | Other | None | SRR25515341 | Sensitive | lineage2.2.1 | None | ERR2679284 | MDR-TB | lineage4.1.3 | None | SRR25515086 | Sensitive | lineage2.2.1 | None | SRR19317586 | HR-TB | lineage4.6.1.1 | None | SRR11033765 | Sensitive | lineage4.3.3 | None | ERR4872256 | RR-TB | lineage4.6.2.2 | None | SRR1173404 | Sensitive | lineage4.6.1.1 | None | SRR12420385 | HR-TB | lineage2.2.1 | None | SRR1723444 | Sensitive | lineage2.2.1 | cn | SRR28239967 | Sensitive | lineage4.3.3 | None | SRR18910201 | Sensitive | lineage2.2.1 | None | SRR28239741 | Other | lineage4.3.3 | None | SAMN02567683 | Sensitive | lineage4.6.1.1 | ug | SRR7535069 | HR-TB | lineage4.6.1.1 | None | SRR28239634 | Sensitive | lineage4.3.3 | None | ERR987727 | HR-TB | lineage4.6.1.1 | None | SRR18715482 | Sensitive | lineage4.3.3 | None | ERR2514853 | Sensitive | lineage4.4 | gb | SRR23862033 | Sensitive | lineage4.3.3 | None | SRR28240065 | Sensitive | lineage4.3.3 | None | SRR24673514 | Sensitive | lineage4.3.3 | None | SRR6832676 | HR-TB | lineage4.7 | None | DRR474157 | Sensitive | lineage2.2.1 | None | ERR230054 | Sensitive | lineage4.6.1.1 | None | SRR2100679 | Sensitive | lineage4.6.1.1 | None | ERR9119648 | RR-TB | lineage4.6.2.2 | None | SRR24673513 | Sensitive | lineage4.3.3 | None | DRR473687 | Sensitive | lineage2.2.1 | None | SRR29538999 | HR-TB | lineage4.7 | None | ERR11082335 | Sensitive | lineage5 | None | ERR4816072 | Sensitive | lineage4.6.1.1 | gb | SRR16115082 | Sensitive | lineage4.1.2.1 | None | SRR12199477 | Sensitive | lineage1.1.1 | None | SRR16370578 | HR-TB | lineage4.6.1.1 | None | SRR16088355 | Sensitive | lineage4.3.3 | None | SRR7131161 | Other | lineage4.8 | None |
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