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SRA data
Rv3793
- c.1563G>A
Drug resistance types
5 Sensitive
0 RR-TB
5 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.2
7
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage4.1.2.1
1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
La2;lineage4.9
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
14
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR181680
HR-TB
lineage1.1.2
mw
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR228278
Sensitive
lineage1.1.2
None
ERR2503435
Sensitive
lineage4.1.2.1
fi
ERR2514733
Sensitive
lineage1.1.2
gb
ERR323039
HR-TB
La2;lineage4.9
None
SRR2100631
Sensitive
lineage1.1.2
None
Showing 1 to 10 of 14 entries
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