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SRA data
Rv3793
- c.1983T>C
Drug resistance types
9 Sensitive
0 RR-TB
1 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.2.2.2
13
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
1
lineage1.1.2;lineage1.2.2.2
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
1
M.canetti;lineage4.2
1
La1.6;La3;M.canetti;lineage4.2.2
1
La1.6;La3;M.canetti;lineage4.2;lineage4.9
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
22
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13265304
Sensitive
lineage1.2.2.2
None
ERR13265890
Other
lineage1.2.2.2
None
ERR13265957
Sensitive
lineage1.2.2.2
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR230093
Sensitive
lineage1.2.2.2
None
ERR3335730
HR-TB
lineage1.2.2.2
pk
ERR3335746
Other
lineage1.2.2.2
pk
ERR403298
MDR-TB
M.canetti;lineage4.2
None
ERR4797768
Sensitive
lineage1.1.2;lineage1.2.2.2
in
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