Rv3793 - c.786C>T
Drug resistance types
100 Sensitive
5 RR-TB
21 HR-TB
14 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 1 |
| 5 | |
| lineage2.2.1 | 21 |
| lineage4.1.2 | 6 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 1 |
| lineage1.1.3.1 | 4 |
| La2 | 2 |
| lineage4.6.1.1 | 2 |
| La1.7.1 | 4 |
| lineage4.1.2.1 | 13 |
| lineage1.2.1.2.1 | 4 |
| La1.2 | 1 |
| lineage3 | 26 |
| La1.8.1 | 7 |
| La1.7 | 1 |
| La3 | 2 |
| lineage1.2.1.2 | 1 |
| lineage1.1.2 | 5 |
| lineage4.3.3 | 8 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1 | 7 |
| lineage4.4.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1 | 2 |
| lineage4.6.3 | 1 |
| lineage4.2.1 | 1 |
| lineage6.2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.8 | 13 |
| lineage6.2.3 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9 | 14 |
| lineage4.2.2.2 | 4 |
| lineage4.7 | 2 |
| lineage1.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage1.1.3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.2 | 1 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 196 |
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR11871420 | Pre-XDR-TB | lineage2.2.1 | None | SRR1188220 | Sensitive | lineage4.1.2 | ca | SRR11871415 | MDR-TB | lineage2.2.1 | None | SRR11871416 | Pre-XDR-TB | lineage2.2.1 | None | SRR1187620 | Sensitive | lineage4.1.2 | ca | SRR11972432 | MDR-TB | lineage2.2.1 | None | SRR11972409 | MDR-TB | lineage2.2.1.1 | None | SRR11972160 | MDR-TB | lineage2.2.1 | None | SRR11972449 | MDR-TB | lineage2.2 | None | SRR12199421 | Sensitive | lineage1.1.3.1 | None | SRR11972456 | MDR-TB | lineage2.2.1 | None | SRR13888789 | Sensitive | La2 | None | SRR12634532 | Sensitive | lineage4.6.1.1 | None | SRR13199753 | Other | La1.7.1 | None | SRR13870371 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16058012 | Sensitive | lineage1.2.1.2.1 | None | SRR14001974 | Other | La1.7.1 | None | SRR14296114 | Other | La1.7.1 | None | SRR13986568 | Other | La1.2 | None | SRR16058325 | Sensitive | lineage3 | None | SRR16058014 | Other | lineage2.2.1 | None | SRR1791987 | Other | La1.8.1 | None | SRR16370604 | HR-TB | lineage1.1.3.1 | None | SRR17156546 | Other | La1.7 | None | SRR1735569 | HR-TB | La3 | None | SRR1791864 | Other | La1.8.1 | None | SRR16370346 | Other | lineage1.2.1.2 | None | SRR1792245 | Other | La1.7.1 | None | SRR19315461 | HR-TB | lineage1.1.3.1 | None | SRR1792489 | Other | La1.8.1 | None | SRR18213723 | Sensitive | lineage1.1.2 | None | SRR19276598 | Pre-XDR-TB | lineage4.3.3 | None | SRR2101429 | Sensitive | lineage4.3.2.1 | None | SRR20995191 | Sensitive | lineage4.4.1.1 | None | SRR2101496 | Sensitive | lineage3 | None | SRR2101434 | Sensitive | lineage4.4.1.1 | None | SRR2101451 | Sensitive | lineage2.2.1 | None | SRR21279443 | Sensitive | lineage4.4.2 | None | SRR2101646 | Other | lineage2.2.1 | None | SRR21279348 | Sensitive | lineage2.2.1 | None | SRR2101555 | MDR-TB | lineage4.8.1 | None | SRR2101592 | Sensitive | lineage4.1.1.3 | None | SRR2101624 | Sensitive | lineage4.1.2.1 | None | SRR2101755 | Sensitive | lineage4.4.1.1.1 | None | SRR21662004 | Other | lineage4.1.2.1 | None | SRR21658764 | HR-TB | lineage4.1.2.1 | None | SRR23174191 | Other | La1.8.1 | None | SRR21662013 | Other | lineage2.2.1 | None | SRR22048493 | Sensitive | lineage4.1.2.1 | None | ERR552117 | Sensitive | lineage4.1 | None | ERR551254 | Sensitive | lineage4.1.2.1 | None | SRR8662667 | Pre-XDR-TB | lineage2.2.1 | None | ERR552308 | Sensitive | lineage4.3.3 | None | ERR552310 | Sensitive | lineage4.3.3 | None | ERR4815629 | Sensitive | lineage4.6.3 | None | ERR176751 | HR-TB | None | ERR4815289 | Other | lineage3 | None | ERR4814405 | HR-TB | lineage2.2.1 | gb | ERR4814439 | Sensitive | lineage4.2.1 | None | ERR551118 | Other | lineage6.2.2 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR1750928 | Sensitive | lineage4.3.2.1 | za | ERR4814734 | Other | lineage1.2.1.1 | None | ERR1750907 | RR-TB | None | ERR4814953 | Sensitive | lineage4.6.1.1 | None | ERR176568 | Other | lineage4.3 | None | ERR1750938 | Other | lineage4.4.1 | None | SRR3675272 | HR-TB | lineage3 | None | ERR176643 | HR-TB | None | ERR4815001 | Sensitive | lineage3.1.3 | None | ERR4816042 | Sensitive | lineage4.1.2.1 | gb | ERR4815098 | Sensitive | lineage1.1.2 | gb | ERR2228966 | Sensitive | lineage4.8 | None | ERR2229003 | Sensitive | lineage4.8 | dk | ERR4816988 | Other | lineage3 | gb | ERR2229037 | Sensitive | lineage4.8 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR2181458 | Sensitive | lineage6.2.3 | gh | ERR2229649 | Sensitive | lineage4.8 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR2228910 | Other | lineage4.8 | None | ERR2229788 | Sensitive | lineage4.8 | dk | ERR4816779 | Other | lineage3 | gb | ERR4816839 | Sensitive | lineage4.9 | None | ERR4816649 | Other | lineage3 | None | ERR2229678 | HR-TB | lineage4.8 | None | ERR4817250 | Sensitive | lineage1.1.3.1 | gb | ERR2229719 | Sensitive | lineage4.8 | None | ERR4817725 | HR-TB | lineage4.1.2.1 | gb | ERR4817672 | Other | lineage1.1.2 | None | ERR2513054 | Other | lineage4.2.2.2 | None | ERR4818663 | Other | lineage3 | None | ERR552075 | MDR-TB | lineage4.1.1.3 | None | ERR2513016 | Sensitive | lineage4.7 | None | ERR4818184 | Sensitive | lineage4.1.2.1 | None | ERR4818743 | Other | lineage4.9 | None | ERR2503387 | Sensitive | lineage4.8 | fi | ERR4818185 | Sensitive | lineage3 | gb | ERR4818303 | Sensitive | lineage4.9 | None | ERR4820287 | Sensitive | lineage4.9 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2513590 | HR-TB | lineage3 | None | ERR4818605 | Sensitive | lineage1.1.1 | gb | ERR2512929 | Sensitive | lineage3 | None | ERR2513617 | Other | lineage4.6.5 | gb | ERR2513661 | Sensitive | lineage4.8 | gb | ERR4820711 | HR-TB | lineage4.1.2 | None | ERR2513871 | Sensitive | lineage3 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819104 | Sensitive | lineage4.9 | None | ERR2514233 | Sensitive | lineage3 | None | ERR4819378 | Other | lineage4.8 | None | ERR4820326 | Sensitive | lineage4.9 | gb | ERR3148227 | Sensitive | lineage4.1.2.1 | mx | ERR4819794 | Sensitive | lineage4.8 | None | SRR5341240 | MDR-TB | lineage2.2.1 | in | ERR2514427 | Sensitive | lineage1.1.3 | None | ERR2514562 | Sensitive | lineage3 | gb | ERR2514788 | Sensitive | lineage4.8 | gb | ERR2514738 | Sensitive | La3 | None | ERR2514747 | HR-TB | lineage1.2.2.2 | gb | ERR4820147 | Sensitive | lineage4.2.2.2 | gb | ERR2514837 | Other | La1.8.1 | gb | ERR2514908 | Sensitive | lineage3 | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR2653109 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR4821781 | Sensitive | lineage4.9 | None | ERR4821893 | Other | lineage3.1.2 | None | ERR4821161 | Sensitive | lineage3 | None | ERR4821430 | Sensitive | lineage4.4.1.1 | None | ERR4821376 | Sensitive | lineage1.1.2 | None | ERR4821705 | Sensitive | None | ERR4821641 | Other | lineage3 | gb | SRR6046291 | Other | lineage3 | None | ERR4821752 | Sensitive | lineage3 | gb | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046761 | Other | lineage3 | gb | SRR6046815 | Other | lineage3 | None | SRR6046796 | Sensitive | lineage3 | None | SRR1640250 | Sensitive | lineage4.1.2 | ca | ERR3077943 | MDR-TB | lineage1.1.2 | None | SRR6257050 | Pre-XDR-TB | lineage4.3.3 | None | SRR6257101 | MDR-TB | lineage2.2.1 | ru | ERR3077951 | Sensitive | lineage4.3.4.2.1 | None | ERR3077946 | HR-TB | lineage3 | None | ERR3077970 | MDR-TB | lineage3.1.1 | None | ERR3077953 | Other | lineage4.2.2.2 | None | ERR3129940 | Sensitive | lineage4.1.2.1 | None | ERR3087504 | Sensitive | lineage4.1.2.1 | None | ERR4831972 | HR-TB | lineage2.2.1.1 | None | ERR4831938 | MDR-TB | lineage2.2.1 | None | SRR6982467 | Other | lineage2.2.1 | None | SRR6896282 | Sensitive | lineage4.3.2.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982250 | Sensitive | lineage4.4.1.1.1 | None | ERR3077931 | MDR-TB | lineage4.2.2.2 | None | SRR6981909 | Sensitive | lineage4.4.1.1 | None | ERR4831879 | HR-TB | lineage2.2.1 | vn | SRR9940950 | Sensitive | lineage4.9 | None | ERR5165798 | Sensitive | lineage4.3.3 | None | SRR9940975 | Sensitive | lineage4.9 | None | SRR9940954 | Sensitive | lineage4.9 | None | SRR9940960 | Sensitive | lineage4.9 | None | SRR9940978 | Sensitive | lineage4.9 | None | SRR9940986 | HR-TB | lineage4.9 | None | SRR9940991 | Sensitive | lineage4.9 | None | DRR034436 | Sensitive | lineage2.2.1 | None | SRR8600152 | Other | La1.8.1 | None | DRR034522 | Sensitive | lineage1.2.1.2.1 | None | DRR034481 | Sensitive | lineage1.2.1.2.1 | None | DRR185025 | Sensitive | lineage2.2.2 | vn | DRR185000 | Other | lineage1.1.1.1 | None | DRR184879 | HR-TB | lineage2.2.1 | vn | ERR1193735 | Sensitive | lineage4.3.3 | pt | ERR10430710 | Sensitive | La2 | None | ERR1193669 | Sensitive | lineage4.3.3 | tr | ERR9125410 | Sensitive | lineage3 | None | ERR1274708 | HR-TB | lineage4.1.1 | None | ERR4192354 | Other | lineage6.1.3 | None | ERR4407470 | HR-TB | lineage4.6.2.2 | None | ERR4407472 | Sensitive | lineage4.1 | None | ERR9117847 | Sensitive | lineage4.7 | None | ERR1367692 | Sensitive | lineage4.3.4.2 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117797 | Sensitive | lineage3 | None | ERR9125729 | Other | lineage2.2.1 | None | ERR9891969 | Sensitive | lineage4.3.3 | None | ERR9896146 | Sensitive | lineage4.6.2.2 | None | SRR10272568 | Sensitive | lineage4.4.1.1 | None | SRR11294512 | Other | La1.8.1 | None | SRR11294527 | HR-TB | La1 | None | ERR9125731 | Sensitive | lineage1.2.1.2.1 | None | SRR10272572 | Sensitive | lineage4.4.1.1 | None |
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