Rv3794 - c.-28delT
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
23 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 6 |
| lineage2.2.1 | 19 |
| lineage4.9 | 1 |
| lineage2.1 | 3 |
| lineage3 | 7 |
| lineage4.3.4.2 | 1 |
| lineage4.5 | 4 |
| lineage4.6.1.2 | 2 |
| lineage4.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4812966 | MDR-TB | lineage4.3.3 | None | ERR4797337 | Pre-XDR-TB | lineage2.2.1 | in | SRR671735 | MDR-TB | lineage2.2.1 | cn | ERR3273184 | MDR-TB | lineage4.9 | None | SRR17234905 | MDR-TB | lineage4.3.3 | None | ERR229989 | HR-TB | lineage4.3.3 | ru | SRR2024966 | Pre-XDR-TB | lineage2.2.1 | cn | SRR11972228 | Pre-XDR-TB | lineage2.2.1 | None | SRR11828992 | Pre-XDR-TB | lineage2.1 | th | SRR28351258 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045446 | Pre-XDR-TB | lineage2.2.1 | None | ERR3335726 | Pre-XDR-TB | lineage3 | pk | ERR3335728 | Pre-XDR-TB | lineage3 | pk | ERR7911492 | MDR-TB | lineage2.2.1 | vn | SRR20969359 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811297 | Pre-XDR-TB | lineage2.2.1 | cn | ERR12118041 | MDR-TB | lineage4.3.3 | None | ERR4796451 | HR-TB | lineage3 | in | ERR4799773 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2533566 | MDR-TB | lineage2.2.1 | uz | SRR5710022 | Pre-XDR-TB | lineage2.1 | th | ERR403266 | MDR-TB | lineage2.2.1 | None | ERR4813365 | MDR-TB | lineage4.3.4.2 | pe | ERR2179647 | MDR-TB | lineage4.5 | None | ERR550923 | MDR-TB | lineage2.2.1 | None | ERR6358933 | MDR-TB | lineage4.6.1.2 | None | SRR10306017 | MDR-TB | lineage4.5 | None | SRR3105768 | Pre-XDR-TB | lineage3 | None | ERR6358756 | MDR-TB | lineage4.6.1.2 | None | SRR1723934 | MDR-TB | lineage4.5 | None | SRR7517681 | MDR-TB | lineage4.1.3 | ci | SRR671743 | MDR-TB | lineage2.2.1 | cn | ERR4813001 | Pre-XDR-TB | lineage4.3.3 | None | SRR6824591 | MDR-TB | lineage4.5 | cn | ERR4796570 | MDR-TB | lineage3 | in | SRR25206950 | Pre-XDR-TB | lineage2.2.1 | None | SRR10185945 | MDR-TB | lineage2.1 | None | SRR28393506 | MDR-TB | lineage4.3.3 | None | ERR5897074 | Pre-XDR-TB | lineage3 | None | ERR5897079 | Pre-XDR-TB | lineage3 | None | SRR25827396 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799783 | Pre-XDR-TB | lineage2.2.1 | None | ERR550922 | MDR-TB | lineage2.2.1 | None | ERR550923_ERR550922 | MDR-TB | lineage2.2.1 | None |
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