Rv3794 - c.1899G>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
210 Sensitive
14 RR-TB
43 HR-TB
234 MDR-TB
45 Pre-XDR-TB
2 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 61 |
| lineage2.2.1.1 | 302 |
| lineage3 | 59 |
| lineage4.9 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage2.2.2 | 3 |
| lineage4.3.2 | 54 |
| lineage4.3.3 | 8 |
| lineage4.1.1.1 | 4 |
| lineage4.8 | 28 |
| lineage4.4.1.1 | 12 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 13 |
| lineage1.1.2;lineage3 | 1 |
| lineage4.3.3;lineage4.8 | 2 |
| lineage4.3.4.2;lineage4.8 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.2.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3.4.1 | 10 |
| lineage1.2.2.2 | 2 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage4.1.2 | 3 |
| lineage3.1.2;lineage4.8 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1;lineage4.8 | 1 |
| La1.8.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.1;lineage4.6.1.2 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage1.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 585 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16370408 | HR-TB | lineage4.5 | None | SRR15600358 | MDR-TB | lineage2.2.1.1 | None | SRR15600384 | MDR-TB | lineage2.2.1.1 | None | SRR14520111 | Sensitive | lineage3 | None | ERR4798012 | Pre-XDR-TB | lineage3 | in | ERR4800521 | Sensitive | lineage3 | in | SRR15600357 | MDR-TB | lineage2.2.1.1 | None | ERR13266243 | HR-TB | lineage4.5 | None | SRR22249442 | Sensitive | lineage2.2.1.1 | None | SRR27450491 | Sensitive | lineage2.2.1.1 | None | SRR29055378 | Sensitive | lineage4.9 | None | SRR30182396 | Other | lineage2.2.1.1 | None | ERR4820434 | Sensitive | lineage2.2.1.1 | None | SRR6152900 | Sensitive | lineage1.2.1.2.1 | ca | SRR28044470 | Sensitive | lineage4.5 | None | ERR270759 | Other | lineage3 | None | ERR7911151 | Pre-XDR-TB | lineage2.2.2 | vn | ERR2707046 | MDR-TB | lineage4.3.2 | cd | SRR5525986 | MDR-TB | lineage2.2.1.1 | None | SRR21732490 | Sensitive | lineage2.2.1.1 | None | SRR15600383 | MDR-TB | lineage2.2.1.1 | None | SRR15723288 | Sensitive | lineage2.2.1.1 | None | SRR14164818 | Sensitive | lineage4.3.3 | None | SRR19318142 | HR-TB | lineage4.1.1.1 | None | SRR21277169 | HR-TB | lineage4.5 | None | SRR12420508 | Sensitive | lineage4.5 | None | ERR400325 | Sensitive | lineage2.2.1.1 | gb | SRR2100530 | Sensitive | lineage3 | None | SRR2101299 | Sensitive | lineage4.8 | None | SRR2101326 | Sensitive | lineage2.2.1.1 | None | ERR2516332 | Sensitive | lineage4.4.1.1 | be | ERR2514675 | Sensitive | lineage3 | gb | ERR2512670 | Sensitive | lineage3 | gb | SRR15600382 | MDR-TB | lineage2.2.1.1 | None | SRR15600390 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15661581 | MDR-TB | lineage2.2.1.1 | None | SRR15661589 | RR-TB | lineage2.2.1.1 | None | SRR15661605 | MDR-TB | lineage2.2.1.1 | None | SRR5526782 | MDR-TB | lineage2.2.1.1 | None | SRR5526903 | MDR-TB | lineage2.2.1.1 | None | SRR29055410 | Sensitive | lineage4.8 | None | SRR5526904 | MDR-TB | lineage2.2.1.1 | None | ERR11775687 | Sensitive | lineage4.8 | None | SRR6079944 | MDR-TB | lineage2.2.1.1 | au | SRR6117340 | Sensitive | lineage2.2.1.1 | au | SRR6079919 | Sensitive | lineage2.2.1.1 | au | SRR6079945 | HR-TB | lineage2.2.1.1 | au | SRR6079950 | MDR-TB | lineage2.2.1.1 | au | SRR6079951 | HR-TB | lineage2.2.1.1 | au | SRR6079972 | HR-TB | lineage2.2.1.1 | au | SRR6079956 | Sensitive | lineage2.2.1.1 | au | SRR6117346 | Sensitive | lineage2.2.1.1 | au | SRR6079964 | Sensitive | lineage2.2.1.1 | au | SRR6040103 | Other | lineage2.2.1.1 | au | SRR6117320 | MDR-TB | lineage2.2.1.1 | au | SRR6079975 | HR-TB | lineage2.2.1.1 | au | SRR6079914 | Sensitive | lineage2.2.1.1 | au | SRR6117329 | MDR-TB | lineage2.2.1.1 | au | SRR6079961 | Sensitive | lineage2.2.1.1 | au | SRR6117327 | Sensitive | lineage2.2.1.1 | au | SRR6117324 | HR-TB | lineage2.2.1.1 | au | SRR6079915 | MDR-TB | lineage2.2.1.1 | au | SRR6079923 | HR-TB | lineage2.2.1.1 | au | SRR6079922 | MDR-TB | lineage2.2.1.1 | au | SRR6117342 | Sensitive | lineage2.2.1.1 | au | SRR6003544 | MDR-TB | lineage2.2.1.1 | au | SRR6079939 | Sensitive | lineage2.2.1.1 | au | SRR6079936 | Sensitive | lineage2.2.1.1 | au | SRR6079967 | MDR-TB | lineage2.2.1.1 | au | SRR6117336 | Sensitive | lineage2.2.1.1 | au | SRR6079946 | Sensitive | lineage2.2.1.1 | au | SRR6079966 | MDR-TB | lineage2.2.1.1 | au | SRR6079953 | MDR-TB | lineage2.2.1.1 | au | SRR6079938 | MDR-TB | lineage2.2.1.1 | au | SRR6117344 | MDR-TB | lineage2.2.1.1 | au | SRR6117334 | MDR-TB | lineage2.2.1.1 | au | SRR6079932 | HR-TB | lineage2.2.1.1 | au | SRR6079965 | Sensitive | lineage2.2.1.1 | au | SRR6079924 | MDR-TB | lineage2.2.1.1 | au | SRR6040100 | MDR-TB | lineage2.2.1.1 | au | SRR6117337 | MDR-TB | lineage2.2.1.1 | au | SRR6079931 | MDR-TB | lineage2.2.1.1 | au | SRR6079971 | Sensitive | lineage2.2.1.1 | au | SRR6117322 | MDR-TB | lineage2.2.1.1 | au | SRR6117350 | Sensitive | lineage2.2.1.1 | au | SRR6079937 | MDR-TB | lineage2.2.1.1 | au | SRR6079935 | MDR-TB | lineage2.2.1.1 | au | SRR6079958 | Sensitive | lineage2.2.1.1 | au | SRR6117343 | MDR-TB | lineage2.2.1.1 | au | SRR6117321 | Sensitive | lineage2.2.1.1 | au | SRR6079930 | MDR-TB | lineage2.2.1.1 | au | SRR6079940 | MDR-TB | lineage2.2.1.1 | au | SRR6079928 | HR-TB | lineage2.2.1.1 | au | SRR12882406 | HR-TB | lineage1.1.3.1 | None | ERR4817499 | Sensitive | lineage2.2.1.1 | None | SRR5073575 | Other | lineage2.2.1 | vn | DRR188873 | Sensitive | lineage4.5 | None | SRR6650293 | Sensitive | lineage4.8 | None | SRR6650336 | Sensitive | lineage4.8 | None | SRR15600344 | MDR-TB | lineage2.2.1.1 | None | SRR25534202 | Sensitive | lineage2.2.1 | None | SRR7069377 | Other | lineage3 | None | SRR15661604 | MDR-TB | lineage2.2.1.1 | None | SRR5526788 | MDR-TB | lineage2.2.1.1 | None | SRR21277113 | Sensitive | lineage4.5 | None | SRR7070174 | Sensitive | lineage3 | None | SRR28868746 | Sensitive | lineage2.2.1.1 | None | SRR15316581 | MDR-TB | lineage2.2.1 | None | SRR15600340 | MDR-TB | lineage2.2.1.1 | None | SRR15661586 | MDR-TB | lineage2.2.1.1 | None | ERR12311974 | Sensitive | lineage4.3.2 | None | SRR25827302 | MDR-TB | lineage4.8 | None | SRR25827865 | Pre-XDR-TB | lineage1.1.2;lineage3 | None | SRR18715380 | HR-TB | lineage4.3.3;lineage4.8 | None | ERR4423621 | MDR-TB | lineage4.3.2 | None | ERR031489 | Sensitive | lineage4.3.4.2;lineage4.8 | None | SRR10305722 | Sensitive | lineage4.5 | None | SRR5520573 | Sensitive | lineage2.2.1.1 | None | SRR15600395 | MDR-TB | lineage2.2.1.1 | None | SRR5526360 | MDR-TB | lineage2.2.1.1 | None | SRR15600369 | RR-TB | lineage2.2.1.1 | None | SRR15600375 | MDR-TB | lineage2.2.1.1 | None | SRR15600343 | MDR-TB | lineage2.2.1.1 | None | ERR11067843 | Other | lineage4.4.1.1 | None | SRR22249603 | Other | lineage2.2.1.1 | None | ERR4799207 | Pre-XDR-TB | lineage3 | None | SRR12420703 | Other | lineage4.5 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SRR5525983 | MDR-TB | lineage2.2.1.1 | None | SRR22249483 | Sensitive | lineage3 | None | SRR16370391 | Pre-XDR-TB | lineage2.2.2 | None | SRR15316254 | Sensitive | lineage4.5 | None | SRR22251637 | Sensitive | lineage2.2.1.1 | None | SRR5525980 | MDR-TB | lineage2.2.1.1 | None | SRR21690308 | Other | lineage4.4.1.1 | None | ERR4820589 | Other | lineage3 | None | SRR28859917 | Sensitive | lineage4.1.2.1 | None | SRR29230792 | MDR-TB | lineage4.3.2 | None | SRR15600397 | MDR-TB | lineage2.2.1.1 | None | SRR6485170 | Other | lineage4.4.1.1 | None | SRR15661595 | MDR-TB | lineage2.2.1.1 | None | SRR15600377 | MDR-TB | lineage2.2.1.1 | None | ERR233371 | Sensitive | lineage4.8 | us | ERR13273335 | Other | lineage4.4.1.1 | None | ERR4423616 | Pre-XDR-TB | lineage4.3.2 | None | SRR15600400 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13285367 | Other | lineage4.4.1.1 | None | ERR13265218 | Sensitive | lineage4.5 | None | SRR5527196 | MDR-TB | lineage2.2.1.1 | None | SRR21659041 | Sensitive | lineage4.8 | None | ERR3276202 | HR-TB | lineage4.3.2 | nl | ERR3276094 | Sensitive | lineage4.5 | nl | SRR29052720 | Sensitive | lineage4.8 | None | SRR29231732 | MDR-TB | lineage4.3.2 | None | ERR4800126 | Sensitive | lineage4.2.2 | None | SRR29053530 | Sensitive | lineage4.8 | None | SRR28868578 | Sensitive | lineage2.2.1.1 | None | SRR29231867 | MDR-TB | lineage4.3.2 | None | SRR29231742 | MDR-TB | lineage4.3.2 | None | SRR29053213 | HR-TB | lineage4.1.1.1 | None | SRR15661608 | MDR-TB | lineage2.2.1.1 | None | SRR5533176 | MDR-TB | lineage2.2.1.1 | None | SRR15600370 | MDR-TB | lineage2.2.1.1 | None | SRR21732783 | Sensitive | lineage2.2.1 | None | ERR386941 | Sensitive | lineage3 | None | SRR15600387 | MDR-TB | lineage2.2.1.1 | None | SRR10767001 | MDR-TB | lineage2.2.1.1 | None | SRR5527198 | MDR-TB | lineage2.2.1.1 | None | ERR4821708 | Sensitive | lineage3 | None | ERR4819129 | Sensitive | lineage3 | None | SRR15368902 | Sensitive | lineage2.2.1;lineage4.5 | None | SRR21732884 | Sensitive | lineage4.5 | None | SRR21239904 | Sensitive | lineage4.3.3 | None | ERR4820026 | Other | lineage3 | None | ERR13291636 | Sensitive | lineage2.2.1 | None | SRR21576736 | MDR-TB | lineage4.5 | None | ERR13262029 | Pre-XDR-TB | lineage3 | None | SRR15661591 | MDR-TB | lineage2.2.1.1 | None | SRR29231697 | MDR-TB | lineage4.3.2 | None | SRR12420491 | Pre-XDR-TB | lineage4.5 | None | SRR14519721 | Sensitive | lineage2.2.1.1 | None | SRR14519718 | Sensitive | lineage2.2.1.1 | None | SRR15661603 | MDR-TB | lineage2.2.1.1 | None | ERR13266027 | HR-TB | lineage4.5 | None | SRR15600391 | MDR-TB | lineage2.2.1.1 | None | ERR4814500 | Other | lineage3 | None | SRR28868408 | Sensitive | lineage2.2.1.1 | None | ERR13265995 | Sensitive | lineage4.5 | None | ERR4800159 | Pre-XDR-TB | lineage3 | None | SRR5525981 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5526157 | MDR-TB | lineage2.2.1.1 | None | SRR15600362 | MDR-TB | lineage2.2.1.1 | None | SRR6964603 | MDR-TB | lineage3 | None | SRR21240168 | Sensitive | lineage4.3.3 | None | SRR5533153 | MDR-TB | lineage2.2.1.1 | None | ERR13291388 | Sensitive | lineage4.3.4.1 | None | SRR6797714 | Sensitive | lineage4.8 | None | ERR4831127 | Other | lineage4.4.1.1 | de | ERR4799445 | HR-TB | lineage3 | in | ERR4811723 | Sensitive | lineage4.3.4.1 | pe | ERR4820166 | Sensitive | lineage3 | gb | SRR15661588 | MDR-TB | lineage2.2.1.1 | None | SRR21675927 | Sensitive | lineage4.8 | None | SRR14164454 | Sensitive | lineage4.3.3 | None | SRR5526917 | MDR-TB | lineage2.2.1.1 | None | SRR19614421 | Sensitive | lineage4.5 | None | ERR4812127 | Sensitive | lineage4.3.4.1 | pe | SRR28351467 | Pre-XDR-TB | lineage3 | None | SRR28045043 | Sensitive | lineage3 | None | SRR28045126 | Sensitive | lineage1.2.2.2 | None | ERR4831032 | Sensitive | lineage2.2.1 | np | ERR2707157 | MDR-TB | lineage4.3.2 | cd | ERR2707028 | MDR-TB | lineage4.3.2 | cd | ERR4813301 | HR-TB | lineage4.3.4.1 | pe | ERR751499 | HR-TB | lineage4.3.4.1 | pe | ERR278582 | Sensitive | lineage3 | None | SRR16370216 | Sensitive | lineage4.8 | None | ERR4024737 | Sensitive | lineage4.3.4.1 | None | SRR2100861 | Other | lineage3 | None | ERR4816547 | Sensitive | lineage3 | gb | ERR4817079 | Sensitive | lineage4.3.2 | gb | ERR4818651 | Sensitive | lineage3 | gb | SRR5520608 | Sensitive | lineage2.2.1.1 | pg | SRR5520605 | Sensitive | lineage2.2.1.1 | pg | SRR5520615 | Sensitive | lineage2.2.1.1 | pg | SRR5520607 | Sensitive | lineage2.2.1.1 | pg | SRR5520575 | Sensitive | lineage2.2.1.1 | pg | SRR5520594 | Sensitive | lineage2.2.1.1 | pg | SRR5552561 | MDR-TB | lineage2.2.1.1 | pg | SRR5552562 | MDR-TB | lineage2.2.1.1 | pg | SRR5552560 | MDR-TB | lineage2.2.1.1 | pg | SRR5552459 | MDR-TB | lineage2.2.1.1 | pg | SRR5552458 | MDR-TB | lineage2.2.1.1 | pg | SRR5552415 | MDR-TB | lineage2.2.1.1 | pg | SRR5552377 | MDR-TB | lineage2.2.1.1 | pg | SRR5552376 | MDR-TB | lineage2.2.1.1 | pg | SRR5552263 | MDR-TB | lineage2.2.1.1 | pg | SRR5551764 | MDR-TB | lineage2.2.1.1 | pg | SRR5551666 | MDR-TB | lineage2.2.1.1 | pg | SRR5551664 | MDR-TB | lineage2.2.1.1 | pg | SRR5550936 | MDR-TB | lineage2.2.1.1 | pg | SRR5551477 | MDR-TB | lineage2.2.1.1 | pg | SRR5551225 | MDR-TB | lineage2.2.1.1 | pg | SRR5549699 | MDR-TB | lineage2.2.1.1 | pg | SRR5533152 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5536057 | MDR-TB | lineage2.2.1.1 | pg | SRR5548263 | MDR-TB | lineage2.2.1.1 | pg | SRR5533249 | MDR-TB | lineage2.2.1.1 | pg | SRR5527202 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5533179 | MDR-TB | lineage2.2.1.1 | pg | SRR5533130 | MDR-TB | lineage2.2.1.1 | pg | SRR5527201 | MDR-TB | lineage2.2.1.1 | pg | SRR5527199 | MDR-TB | lineage2.2.1.1 | pg | SRR5527177 | MDR-TB | lineage2.2.1.1 | pg | SRR5527179 | MDR-TB | lineage2.2.1.1 | pg | SRR5526916 | MDR-TB | lineage2.2.1.1 | pg | SRR5526865 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5526844 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5526915 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5526842 | MDR-TB | lineage2.2.1.1 | pg | SRR5526843 | MDR-TB | lineage2.2.1.1 | pg | SRR5526787 | MDR-TB | lineage2.2.1.1 | pg | SRR5526158 | MDR-TB | lineage2.2.1.1 | pg | SRR5526785 | MDR-TB | lineage2.2.1.1 | pg | SRR5525998 | MDR-TB | lineage2.2.1.1 | pg | SRR5526639 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5526775 | MDR-TB | lineage2.2.1.1 | pg | SRR5525996 | MDR-TB | lineage2.2.1.1 | pg | SRR5525987 | MDR-TB | lineage2.2.1.1 | pg | SRR5526019 | MDR-TB | lineage2.2.1.1 | pg | SRR5526351 | MDR-TB | lineage2.2.1.1 | pg | SRR5527175 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5520599 | HR-TB | lineage2.2.1.1 | pg | SRR5520600 | HR-TB | lineage2.2.1.1 | pg | SRR5520596 | HR-TB | lineage2.2.1.1 | pg | SRR5817475 | MDR-TB | lineage2.2.1.1 | au | SRR8237385 | Sensitive | lineage2.2.1.1 | pg | SRR8237391 | MDR-TB | lineage2.2.1.1 | pg | SRR8237387 | Sensitive | lineage2.2.1.1 | pg | SRR8237386 | Sensitive | lineage2.2.1.1 | pg | SRR8237390 | Sensitive | lineage2.2.1.1 | pg | SRR8237388 | HR-TB | lineage2.2.1.1 | pg | SRR8237392 | Sensitive | lineage2.2.1.1 | pg | SRR29127097 | Sensitive | lineage4.5 | None | SRR22251769 | Sensitive | lineage2.2.1.1 | None | SRR15661598 | XDR-TB | lineage2.2.1.1 | None | SRR25827324 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | SRR5525982 | MDR-TB | lineage2.2.1.1 | None | SRR5525997 | MDR-TB | lineage2.2.1.1 | None | SRR21732072 | RR-TB | lineage2.2.1.1 | None | SRR27450407 | RR-TB | lineage2.2.1.1 | None | SRR29231657 | MDR-TB | lineage4.3.2 | None | ERR13291418 | Sensitive | lineage4.5 | None | SRR26112152 | Sensitive | lineage2.2.1 | None | ERR6865685 | Sensitive | lineage4.1.2 | None | SRR15600349 | MDR-TB | lineage2.2.1.1 | None | SRR10767003 | MDR-TB | lineage2.2.1.1 | None | SRR14519868 | Sensitive | lineage2.2.1.1 | None | ERR4024564 | Sensitive | lineage4.1.2 | None | SRR5533131 | RR-TB | lineage2.2.1.1 | None | SRR21732258 | Sensitive | lineage2.2.1.1 | None | SRR10766999 | MDR-TB | lineage2.2.1.1 | None | SRR15661600 | MDR-TB | lineage2.2.1.1 | None | SRR15661590 | MDR-TB | lineage2.2.1.1 | None | SRR12420437 | Other | lineage4.5 | None | SRR22251106 | Sensitive | lineage4.5 | None | SRR15600364 | MDR-TB | lineage2.2.1.1 | None | SRR26800487 | Sensitive | lineage4.8 | None | ERR2503407 | MDR-TB | lineage1.2.1.2.1 | fi | SRR11033681 | Other | lineage4.3.3;lineage4.8 | None | SRR19224237 | Sensitive | lineage4.8 | None | SRR27450088 | Sensitive | lineage2.2.1.1 | None | SRR22251864 | Sensitive | lineage3 | None | SRR13591391 | Sensitive | lineage4.3.2 | None | SRR15600345 | MDR-TB | lineage2.2.1.1 | None | SRR15600394 | MDR-TB | lineage2.2.1.1 | None | SRR27450542 | Sensitive | lineage2.2.1.1 | None | ERR9907724 | MDR-TB | lineage4.3.2 | None | SRR27450217 | Sensitive | lineage2.2.1.1 | None | SRR15600393 | RR-TB | lineage2.2.1.1 | None | SRR15600396 | MDR-TB | lineage2.2.1.1 | None | SRR16058667 | Other | lineage4.5 | None | SRR18715386 | Sensitive | lineage4.8 | None | SRR13591453 | Sensitive | lineage4.3.2 | None | SRR15600367 | MDR-TB | lineage2.2.1.1 | None | SRR15600379 | MDR-TB | lineage2.2.1.1 | None | SRR25207149 | Pre-XDR-TB | lineage4.5 | None | SRR15661602 | MDR-TB | lineage2.2.1.1 | None | SRR30182519 | MDR-TB | lineage2.2.1.1 | None | SRR21239927 | Sensitive | lineage4.3.3 | None | SRR29055968 | Sensitive | lineage4.8 | None | SRR14164733 | Sensitive | lineage4.3.3 | None | ERR4817552 | Sensitive | lineage2.2.1.1 | None | ERR3132225 | Other | lineage4.4.1.1 | None | SRR16058657 | Other | lineage4.5 | None | SRR15600371 | MDR-TB | lineage2.2.1.1 | None | SRR15600378 | MDR-TB | lineage2.2.1.1 | None | SRR29440961 | RR-TB | lineage2.2.1.1 | None | SRR29126232 | Other | lineage4.4.1.1 | None | SRR22424739 | Pre-XDR-TB | lineage3 | None | SRR28868512 | Other | lineage4.5 | None | SRR28045452 | Sensitive | lineage3 | None | SRR15600374 | MDR-TB | lineage2.2.1.1 | None | SRR29231738 | MDR-TB | lineage4.3.2 | None | SRR25827551 | MDR-TB | lineage3.1.2;lineage4.8 | None | SRR15368721 | MDR-TB | lineage4.5 | None | SRR28394158 | HR-TB | lineage4.3.4.1 | None | SRR29440774 | Sensitive | lineage2.2.1.1 | None | SRR29231300 | MDR-TB | lineage4.3.2 | None | SRR15600398 | MDR-TB | lineage2.2.1.1 | None | SRR13591362 | Sensitive | lineage4.3.2 | None | SRR5526839 | MDR-TB | lineage2.2.1.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR15600338 | MDR-TB | lineage2.2.1.1 | None | SRR15600359 | RR-TB | lineage2.2.1.1 | None | ERR4819847 | Sensitive | lineage4.3.2 | gb | SRR21662810 | Sensitive | lineage4.9 | None | SRR29231733 | MDR-TB | lineage4.3.2 | None | ERR4195376 | Sensitive | lineage2.2.1 | None | ERR3287408 | Sensitive | lineage4.3.2 | pe | ERR4811650 | Pre-XDR-TB | lineage4.5 | cn | SRR15661606 | MDR-TB | lineage2.2.1.1 | None | ERR4810745 | Sensitive | lineage4.5 | None | ERR4814051 | Sensitive | lineage4.3.3 | None | SRR21559902 | MDR-TB | lineage4.5 | None | SRR5526905 | MDR-TB | lineage2.2.1.1 | None | ERR4811099 | Sensitive | lineage4.5 | cn | SRR7070103 | Sensitive | lineage3 | None | ERR4810977 | Pre-XDR-TB | lineage4.5 | cn | ERR2706934 | MDR-TB | lineage4.3.2 | cd | ERR2707134 | MDR-TB | lineage4.3.2 | cd | ERR2706997 | MDR-TB | lineage4.3.2 | cd | ERR2707130 | MDR-TB | lineage4.3.2 | cd | ERR2706979 | MDR-TB | lineage4.3.2 | cd | ERR2707189 | MDR-TB | lineage4.3.2 | cd | ERR2707182 | MDR-TB | lineage4.3.2 | cd | ERR2706956 | MDR-TB | lineage4.3.2 | cd | ERR2707229 | MDR-TB | lineage4.3.2 | cd | ERR2706958 | MDR-TB | lineage4.3.2 | cd | ERR2707090 | MDR-TB | lineage4.3.2 | cd | ERR2706976 | MDR-TB | lineage4.3.2 | cd | ERR2707220 | MDR-TB | lineage4.3.2 | cd | ERR4813970 | RR-TB | lineage4.3.3 | br | SRR24799241 | Sensitive | lineage4.1.2.1 | None | SRR5525995 | MDR-TB | lineage2.2.1.1 | None | SRR25207239 | Pre-XDR-TB | lineage4.5 | None | SRR25827439 | XDR-TB | lineage2.2.1.2;lineage3.1.2.1 | None | SRR12420743 | Pre-XDR-TB | lineage4.5 | None | SRR15600356 | MDR-TB | lineage2.2.1.1 | None | SRR2100330 | Sensitive | lineage3 | None | ERR1193771 | Sensitive | lineage4.3.2 | pt | ERR1193773 | Sensitive | lineage4.3.2 | pt | ERR2516302 | MDR-TB | lineage4.3.2 | be | ERR4821959 | Sensitive | lineage4.3.2 | gb | ERR2513918 | Sensitive | lineage3 | gb | ERR2514791 | Sensitive | lineage4.8 | gb | ERR2514816 | Sensitive | lineage3 | gb | ERR2514831 | Sensitive | lineage2.2.1.1 | gb | SRR15600388 | MDR-TB | lineage2.2.1.1 | None | SRR15600373 | MDR-TB | lineage2.2.1.1;lineage4.8 | None | SRR15600399 | MDR-TB | lineage2.2.1.1 | None | SRR15600339 | MDR-TB | lineage2.2.1.1 | None | SRR15600354 | MDR-TB | lineage2.2.1.1 | None | SRR15600376 | HR-TB | lineage2.2.1.1 | None | SRR15661582 | MDR-TB | lineage2.2.1.1 | None | SRR5525985 | MDR-TB | lineage2.2.1.1 | None | ERR4815984 | Sensitive | lineage4.3.2 | None | SRR29230994 | MDR-TB | lineage4.3.2 | None | SRR27450300 | Sensitive | lineage4.1.2 | None | SRR5526845 | MDR-TB | lineage2.2.1.1 | None | SRR6117326 | Sensitive | lineage2.2.1.1 | au | SRR6117348 | MDR-TB | lineage2.2.1.1 | au | SRR6079974 | HR-TB | lineage2.2.1.1 | au | SRR6117338 | MDR-TB | lineage2.2.1.1 | au | SRR6079970 | Sensitive | lineage2.2.1.1 | au | SRR6117328 | Sensitive | lineage2.2.1.1 | au | SRR6079969 | Sensitive | lineage2.2.1.1 | au | SRR6079933 | MDR-TB | lineage2.2.1.1 | au | SRR6079954 | HR-TB | lineage2.2.1.1 | au | SRR6117325 | MDR-TB | lineage2.2.1.1 | au | SRR6079960 | Sensitive | lineage2.2.1.1 | au | SRR6079947 | Sensitive | lineage2.2.1.1 | au | SRR6117345 | MDR-TB | lineage2.2.1.1 | au | SRR6117323 | Sensitive | lineage2.2.1.1 | au | SRR6079948 | Sensitive | lineage2.2.1.1 | au | SRR6117330 | Sensitive | lineage2.2.1.1 | au | SRR6079943 | Sensitive | lineage2.2.1.1 | au | SRR6079917 | MDR-TB | lineage2.2.1.1 | au | SRR6079955 | Sensitive | lineage2.2.1.1 | au | SRR6079918 | HR-TB | lineage2.2.1.1 | au | SRR6079959 | HR-TB | lineage2.2.1.1 | au | SRR6079968 | Sensitive | lineage2.2.1.1 | au | SRR6079934 | Sensitive | lineage2.2.1.1 | au | SRR6079941 | HR-TB | lineage2.2.1.1 | au | SRR6079921 | MDR-TB | lineage2.2.1.1 | au | SRR6079942 | Sensitive | lineage2.2.1.1 | au | SRR6117331 | Sensitive | lineage2.2.1.1 | au | SRR13591390 | Sensitive | lineage4.3.2 | None | SRR13591439 | Other | lineage4.3.2 | None | SRR3724951 | MDR-TB | lineage4.3.2 | cd | SRR29440871 | MDR-TB | lineage2.2.1.1 | None | SRR26112109 | Other | La1.8.2 | None | SRR5533143 | MDR-TB | lineage2.2.1.1 | None | ERR2179690 | Sensitive | lineage4.5 | cn | SRR6797307 | Other | lineage4.8 | None | ERR11465645 | Sensitive | lineage4.3.4.2.1 | None | SRR21658548 | Sensitive | lineage4.8 | None | SRR25827707 | Pre-XDR-TB | lineage3 | None | SRR12420782 | Sensitive | lineage4.5 | None | SRR20969610 | Sensitive | lineage4.5 | None | SRR15600372 | MDR-TB | lineage2.2.1.1 | None | SRR15600350 | MDR-TB | lineage2.2.1.1 | None | ERR4819960 | Other | lineage3 | None | SRR15600353 | MDR-TB | lineage2.2.1.1 | None | SRR21732644 | Sensitive | lineage2.2.1.1 | None | SRR10766998 | MDR-TB | lineage2.2.1.1 | None | SRR5527176 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5533129 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29231565 | MDR-TB | lineage4.3.2 | None | SRR29053489 | Sensitive | lineage4.5 | None | SRR25207024 | MDR-TB | lineage4.5 | None | SRR29231760 | MDR-TB | lineage4.3.2 | None | ERR11050557 | Sensitive | lineage3 | None | SRR14519804 | Sensitive | lineage2.2.1.1 | None | ERR228145 | Sensitive | lineage4.8 | None | SRR15600380 | MDR-TB | lineage2.2.1.1 | None | SRR5527178 | MDR-TB | lineage2.2.1.1 | None | SRR5535862 | MDR-TB | lineage4.3.2 | None | SRR12420594 | Pre-XDR-TB | lineage4.5 | None | SRR22251573 | HR-TB | lineage2.2.1.1 | None | ERR13266658 | Pre-XDR-TB | lineage3 | None | SRR29093609 | RR-TB | lineage3 | None | ERR13266868 | Sensitive | lineage3 | None | ERR228173 | Sensitive | lineage3 | None | SRR12634633 | Sensitive | lineage3.1.1;lineage4.6.1.2 | None | SRR5526846 | MDR-TB | lineage2.2.1.1 | None | SRR5526784 | MDR-TB | lineage2.2.1.1 | None | ERR114482 | Sensitive | lineage3 | None | SRR28868705 | Sensitive | lineage2.2.1.1 | None | SRR29231327 | MDR-TB | lineage4.3.2 | None | ERR13275928 | Other | lineage4.4.1.1 | None | SRR15600352 | MDR-TB | lineage2.2.1.1 | None | SRR5525984 | MDR-TB | lineage2.2.1.1 | None | SRR20632799 | Pre-XDR-TB | lineage2.1 | None | ERR13265732 | MDR-TB | lineage4.5 | None | SRR18714977 | Sensitive | lineage4.8 | None | SRR12420434 | MDR-TB | lineage4.5 | None | SRR15661601 | MDR-TB | lineage2.2.1.1 | None | SRR22251863 | Sensitive | lineage2.2.1.1 | None | SRR25207027 | MDR-TB | lineage4.5 | None | SRR29096686 | Sensitive | lineage3 | None | SRR20969970 | RR-TB | lineage2.2.2 | None | SRR13591440 | Sensitive | lineage4.3.2 | None | SRR29231741 | MDR-TB | lineage4.3.2 | None | SRR5520572 | Sensitive | lineage2.2.1.1;lineage4 | None | SRR5526696 | MDR-TB | lineage2.2.1.1 | None | ERR6865620 | Sensitive | lineage4.3.4.1 | None | SRR21691050 | HR-TB | lineage4.3.2 | None | ERR9125490 | Other | lineage4.5 | None | SRR25827646 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR12420343 | Pre-XDR-TB | lineage4.5 | None | SRR25827383 | MDR-TB | lineage3 | None | ERR9125897 | Other | lineage2.2.1 | None | ERR9125481 | Other | lineage4.5 | None | SRR20970006 | Sensitive | lineage4.5 | None | SRR29052761 | HR-TB | lineage4.5 | None | SRR15661580 | MDR-TB | lineage2.2.1.1 | None | ERR13265875 | HR-TB | lineage4.5 | None | ERR13284246 | Sensitive | lineage4.5 | None | SRR21732676 | Sensitive | lineage2.2.1.1 | None | SRR29231778 | MDR-TB | lineage4.3.2 | None | SRR5550401 | RR-TB | lineage2.2.1.1 | None | SRR13392109 | HR-TB | lineage4.1.1.1 | None | ERR13265018 | HR-TB | lineage4.5 | None | SRR15600392 | MDR-TB | lineage2.2.1.1 | None | SRR15661583 | MDR-TB | lineage2.2.1.1 | None | SRR15661587 | MDR-TB | lineage2.2.1.1 | None | SRR6964672 | Pre-XDR-TB | lineage3 | None | SRR16099287 | Sensitive | lineage2.2.1 | None | ERR11081698 | Sensitive | lineage4.8 | None | ERR13259962 | Pre-XDR-TB | lineage4.8 | None | ERR3335781 | Pre-XDR-TB | lineage3 | pk | ERR4796392 | Pre-XDR-TB | lineage3 | in | SRR16058255 | Other | lineage2.2.1 | None | ERR4796855 | Pre-XDR-TB | lineage3 | in | SRR15661584 | MDR-TB | lineage2.2.1.1 | None | SRR14519717 | Other | lineage2.2.1.1 | None | ERR13266924 | MDR-TB | lineage3 | None | ERR13265945 | MDR-TB | lineage4.5 | None | ERR4797482 | Sensitive | lineage4.5 | in | SRR18715338 | Sensitive | lineage4.8 | None | ERR4797795 | Pre-XDR-TB | lineage3 | in | SRR15600341 | MDR-TB | lineage2.2.1.1 | None | ERR7902599 | Sensitive | lineage1.1.2 | None | ERR4799117 | Pre-XDR-TB | lineage3 | in | SRR17406778 | Sensitive | lineage4.8 | None | SRR25206858 | MDR-TB | lineage2.2.1 | None | SRR10766997 | Sensitive | lineage2.2.1.1 | None | SRR10305723 | Sensitive | lineage4.5 | None | SRR16089855 | Other | lineage4.5 | None | SRR21690816 | Sensitive | lineage4.5 | None | SRR15600385 | MDR-TB | lineage2.2.1.1 | None | SRR29289215 | MDR-TB | lineage3 | None | ERR11049634 | Sensitive | lineage3 | None | ERR2512574 | Sensitive | lineage3 | gb | SRR24114347 | RR-TB | lineage3 | None | SRR15600342 | MDR-TB | lineage2.2.1.1 | None | SRR28239916 | Sensitive | lineage4.8 | None | SRR15600389 | MDR-TB | lineage2.2.1.1 | None | ERR4797025 | Pre-XDR-TB | lineage3 | in | ERR10465753 | Sensitive | lineage1.1.2 | None | SRR15600366 | MDR-TB | lineage2.2.1.1 | None | SRR5526642 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15661596 | MDR-TB | lineage2.2.1.1 | None | ERR9121789 | Sensitive | lineage2.2.1 | None | SRR29231511 | Sensitive | lineage1.2.2.2 | None | ERR13264973 | HR-TB | lineage4.5 | None | ERR13265841 | Sensitive | lineage4.5 | None | SRR15661594 | MDR-TB | lineage2.2.1.1 | None | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | SRR24827307 | HR-TB | lineage4.1.1.1 | None | ERR13262058 | Sensitive | lineage3 | None | SRR27450418 | RR-TB | lineage2.2.1.1 | None | SRR29231704 | MDR-TB | lineage4.3.2 | None | SRR15600337 | MDR-TB | lineage2.2.1.1 | None | SRR22251643 | Sensitive | lineage4.5 | None | SRR29440874 | Sensitive | lineage2.2.1.1 | None | SRR15600360 | MDR-TB | lineage2.2.1.1 | None | SRR15661597 | MDR-TB | lineage2.2.1.1 | None | SRR5533151 | MDR-TB | lineage2.2.1.1 | None | SRR29440623 | Sensitive | lineage2.2.1.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR25207025 | MDR-TB | lineage4.5 | None | SRR5526332 | MDR-TB | lineage2.2.1.1 | None | ERR13266023 | HR-TB | lineage4.5 | None | SRR15600355 | MDR-TB | lineage2.2.1.1 | None | SRR16089692 | Sensitive | lineage4.3.4.1 | None | SRR6930916 | Pre-XDR-TB | lineage4.8 | None | SRR28858515 | HR-TB | lineage4.3.4.1 | None | SRR5526143 | MDR-TB | lineage2.2.1.1 | None | SRR5527200 | MDR-TB | lineage2.2.1.1 | None | ERR13276065 | Other | lineage4.4.1.1 | None | ERR4797153 | Sensitive | lineage3 | in | SRR15661599 | MDR-TB | lineage2.2.1.1 | None | SRR15661585 | MDR-TB | lineage2.2.1.1 | None |
|---|
