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SRA data
Rv3794
- c.1908C>T
Drug resistance types
9 Sensitive
0 RR-TB
2 HR-TB
0 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
4
lineage3
2
lineage1.2.2.2
2
M.canetti;lineage4.9
2
lineage1.1.3.1
1
lineage4.3.2
1
lineage4.9
1
lineage4.5
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
14
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3797028
HR-TB
M.canetti;lineage4.9
None
ERR4821039
Sensitive
lineage3
gb
ERR4821361
Sensitive
lineage1.1.3.1
None
SRR12882715
Sensitive
lineage3
None
SRR21276982
Sensitive
lineage4.5
None
SRR21277336
Sensitive
lineage2.2.1
None
SRR21277358
Sensitive
lineage2.2.1
None
SRR25207145
Pre-XDR-TB
lineage2.2.1
None
SRR29385475
Pre-XDR-TB
lineage2.2.1
None
SRR30146988
Sensitive
lineage4.3.2
None
Showing 1 to 10 of 14 entries
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