Rv3794 - c.2175G>C
Drug resistance types
55 Sensitive
3 RR-TB
16 HR-TB
12 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 65 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 7 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR067469 | Sensitive | lineage2.2.1 | None | DRR034478 | Sensitive | lineage2.2.1 | None | SRR067495 | Sensitive | lineage2.2.1 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR069932 | Sensitive | lineage2.2.1 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR067529 | Sensitive | lineage2.2.1 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR069997 | Sensitive | lineage2.2.1 | None | SRR067507 | Other | lineage2.2.1 | None | SRR125292 | Sensitive | lineage2.2.1 | None | ERR4822371 | MDR-TB | lineage2.2.1 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | SRR067564 | Sensitive | lineage2.2.1 | None | SRR067500 | Sensitive | lineage2.2.1 | None | SRR069919 | Sensitive | lineage2.2.1 | None | SRR069954 | Sensitive | lineage2.2.1 | None | SRR070024 | Sensitive | lineage2.2.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | DRR188902 | Other | lineage2.2.1 | None | SRR069998 | Sensitive | lineage2.2.1 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR070006 | Sensitive | lineage2.2.1 | None | SRR067485 | Sensitive | lineage2.2.1 | None | SRR067555 | Sensitive | lineage2.2.1 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR125302 | Sensitive | lineage2.2.1 | None | DRR473990 | Sensitive | lineage2.2.1 | None | DRR189091 | Sensitive | lineage2.2.1 | None | ERR13291891 | Sensitive | lineage2.2.1 | None | SRR067543 | Sensitive | lineage2.2.1 | None | SRR069955 | RR-TB | lineage2.2.1 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR069937 | Sensitive | lineage2.2.1 | None | SRR125311 | Sensitive | lineage2.2.1 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR067519 | RR-TB | lineage2.2.1 | None | SRR125285 | Sensitive | lineage2.2.1 | None | SRR067558 | Sensitive | lineage2.2.1 | None | SRR069935 | Sensitive | lineage2.2.1 | None | DRR130160 | MDR-TB | lineage2.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR067548 | Other | lineage2.2.1 | None | SRR125294 | Sensitive | lineage2.2.1 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR067467 | Sensitive | lineage2.2.1 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | DRR189060 | Sensitive | lineage2.2.1 | None | DRR346652 | Sensitive | lineage2.2.1 | None | SRR067553 | Sensitive | lineage2.2.1 | None | SRR070001 | Sensitive | lineage2.2.1 | None | SRR070022 | Sensitive | lineage2.2.1 | None | SRR125303 | Sensitive | lineage2.2.1 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR125304 | Sensitive | lineage2.2.1 | None | SRR28339295 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1765871 | Sensitive | lineage2.2.1 | None | SRR070005 | Sensitive | lineage2.2.1 | None | SRR069951 | Sensitive | lineage2.2.1 | None | SRR069961 | Sensitive | lineage2.2.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | DRR474170 | Sensitive | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR067536 | Other | lineage2.2.1 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR069992 | Sensitive | lineage2.2.1 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR070018 | Sensitive | lineage2.2.1 | None | SRR067537 | Sensitive | lineage2.2.1 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR125291 | Sensitive | lineage2.2.1 | None | SRR067556 | Sensitive | lineage2.2.1 | None | SRR067506 | Sensitive | lineage2.2.1;lineage4 | None | DRR188854 | Sensitive | lineage2.2.1 | None | SRR069936 | Sensitive | lineage2.2.1 | None | SRR070020 | Sensitive | lineage2.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR069984 | Sensitive | lineage2.2.1 | None | SRR069921 | RR-TB | lineage2.2.1 | None | SRR067501 | Sensitive | lineage2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR069953 | Sensitive | lineage2.2.1 | None | DRR346640 | Sensitive | lineage2.2.1 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR28339296 | Pre-XDR-TB | lineage2.2.1 | None | SRR125299 | Sensitive | lineage2.2.1 | None | SRR125297 | Sensitive | lineage2.2.1 | None |
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