lineage | Count |
---|---|
lineage1.2.2.2;lineage2.2.1 | 1 |
lineage4.1.1.3 | 14 |
lineage4.1.1.1 | 4 |
lineage2.2.1 | 131 |
lineage4.3.3 | 8 |
lineage4.1.2.1 | 15 |
lineage4.4.2 | 8 |
lineage4.3.4.2.1 | 4 |
lineage3 | 6 |
lineage4.2.2.2 | 6 |
lineage2.2.1.1 | 5 |
lineage4.1.3 | 1 |
lineage6 | 1 |
lineage4.1 | 4 |
lineage2.2.1;lineage4.4.2 | 1 |
lineage4.8 | 2 |
lineage1.1.2 | 3 |
lineage8 | 1 |
lineage1.2.2.2 | 4 |
lineage4.5 | 5 |
lineage4.4.1.1 | 4 |
lineage4.1.1 | 3 |
lineage3.1.3 | 1 |
lineage1.1.1;lineage2.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage2.2.2 | 6 |
lineage4.1.4 | 2 |
lineage4.3.4.2 | 3 |
lineage4.9.1 | 1 |
lineage4.2.1 | 2 |
lineage6.3.1 | 1 |
lineage2.1 | 2 |
La3;lineage3 | 2 |
lineage4 | 2 |
lineage4.3.2 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 257 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR4799902 | MDR-TB | lineage1.2.2.2;lineage2.2.1 | None |
ERR9119915 | Pre-XDR-TB | lineage4.1.1.3 | None |
ERR553002 | MDR-TB | lineage4.1.1.1 | sz |
ERR789238 | XDR-TB | lineage2.2.1 | None |
ERR8773874 | Pre-XDR-TB | lineage4.3.3 | None |
ERR2099783 | Pre-XDR-TB | lineage4.1.2.1 | es |
SRR25207045 | MDR-TB | lineage4.4.2 | None |
SRR17657952 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11662159 | MDR-TB | lineage2.2.1 | None |
ERR3509859 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SRR16089395 | RR-TB | lineage2.2.1 | None |
ERR11488827 | Pre-XDR-TB | lineage3 | None |
ERR6397203 | MDR-TB | lineage4.1.2.1 | None |
ERR1034639 | Pre-XDR-TB | lineage4.1.1.3 | None |
ERR4809273 | MDR-TB | lineage4.1.1.3 | za |
ERR2510419 | Pre-XDR-TB | lineage4.2.2.2 | pk |
ERR2510400 | Pre-XDR-TB | lineage4.2.2.2 | pk |
SRR25827536 | Pre-XDR-TB | lineage3 | None |
ERR5865019 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29289204 | XDR-TB | lineage4.2.2.2 | None |
ERR1034603 | Pre-XDR-TB | lineage4.1.1.3 | pk |
SRR8651604 | Pre-XDR-TB | lineage2.2.1 | None |
SRR2024988 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR2024991 | Pre-XDR-TB | lineage2.2.1.1 | cn |
ERR1679586 | MDR-TB | lineage4.1.3 | ng |
SRR28706444 | HR-TB | lineage2.2.1 | None |
ERR502959 | RR-TB | lineage4.4.2 | None |
ERR5865017 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3806631 | MDR-TB | lineage6 | None |
ERR4797269 | Pre-XDR-TB | lineage2.2.1 | in |
SRR1162691 | MDR-TB | lineage4.1 | None |
SRR11786865 | MDR-TB | lineage2.2.1 | None |
SRR7341702 | HR-TB | lineage4.1.2.1 | ro |
ERR789236 | XDR-TB | lineage2.2.1 | None |
ERR13290825 | MDR-TB | lineage2.2.1 | None |
SRR6824671 | RR-TB | lineage2.2.1;lineage4.4.2 | cn |
ERR1034665 | MDR-TB | lineage4.8 | bg |
SRR25389469 | MDR-TB | lineage2.2.1 | None |
ERR2516808 | MDR-TB | lineage4.3.4.2.1 | gb |
ERR7801134 | HR-TB | lineage4.3.3 | None |
SRR11662259 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1952142 | MDR-TB | lineage1.1.2 | ie |
SAMN02567762 | MDR-TB | lineage8 | None |
SRR25207080 | Pre-XDR-TB | lineage4.4.2 | None |
SRR21576721 | MDR-TB | lineage2.2.1 | None |
ERR789235 | XDR-TB | lineage2.2.1 | None |
ERR4799898 | MDR-TB | lineage1.2.2.2 | in |
SRR6824330 | MDR-TB | lineage4.5 | cn |
SRR11662577 | MDR-TB | lineage2.2.1 | None |
SAMN02231166 | MDR-TB | lineage4.1 | ml |
ERR550649 | MDR-TB | lineage4.4.1.1 | None |
SRR24710169 | MDR-TB | lineage2.2.1 | None |
ERR2516693 | Pre-XDR-TB | lineage4.1.1 | pe |
SRR25389482 | Pre-XDR-TB | lineage2.2.1 | None |
DRR130170 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665770 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4830486 | MDR-TB | lineage4.1.1.1 | za |
ERR3132175 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11662570 | Pre-XDR-TB | lineage2.2.1 | None |
SRR671767 | MDR-TB | lineage4.5 | cn |
SRR25206989 | MDR-TB | lineage2.2.1 | None |
ERR13266950 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR25389467 | MDR-TB | lineage2.2.1 | None |
SRR11662383 | MDR-TB | lineage2.2.1 | None |
SRR25207266 | Pre-XDR-TB | lineage4.4.2 | None |
ERR4811163 | Pre-XDR-TB | lineage4.4.2 | cn |
SRR14088366 | MDR-TB | lineage4.2.2.2 | None |
DRR130058 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2099776 | MDR-TB | lineage4.1.2.1 | es |
DRR130166 | XDR-TB | lineage2.2.1 | None |
ERR8773611 | MDR-TB | lineage2.2.1 | None |
SRR11662720 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10305652 | MDR-TB | lineage2.2.1 | None |
SRR24256249 | MDR-TB | lineage2.2.1 | None |
SRR25206985 | MDR-TB | lineage2.2.1 | None |
ERR11044642 | MDR-TB | lineage3.1.3 | None |
ERR13291210 | RR-TB | lineage2.2.1 | None |
SRR12420476 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13285095 | MDR-TB | lineage4.1.2.1 | None |
SRR25827460 | Pre-XDR-TB | lineage4.8 | None |
SRR29539371 | MDR-TB | lineage4.3.3 | None |
SRR16370530 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3132179 | Pre-XDR-TB | lineage2.2.1 | None |
SRR9971252 | MDR-TB | lineage4.1.1.1 | None |
ERR9119916 | Pre-XDR-TB | lineage4.1.1.3 | None |
ERR789234 | XDR-TB | lineage2.2.1 | None |
SRR21887741 | Pre-XDR-TB | lineage2.2.1 | None |
ERR12328166 | HR-TB | lineage1.1.1;lineage2.2.1 | None |
SRR21747027 | Pre-XDR-TB | lineage2.2.1 | None |
SRR22424759 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3256203 | MDR-TB | lineage4.3.4.1 | ph |
SRR11662657 | MDR-TB | lineage2.2.1 | None |
SRR29056323 | RR-TB | lineage2.2.1 | None |
SRR28045916 | Pre-XDR-TB | lineage4.1.1.3 | None |
SRR25389468 | MDR-TB | lineage2.2.1 | None |
ERR789239 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29772547 | MDR-TB | lineage1.1.2 | None |
SRR5709759 | Pre-XDR-TB | lineage2.2.2 | th |
SRR30180405 | MDR-TB | lineage2.2.1 | None |
ERR13290787 | Pre-XDR-TB | lineage2.2.1 | None |
ERR067683 | HR-TB | lineage4.3.3 | ru |
SRR25389484 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13870409 | Pre-XDR-TB | lineage4.1.4 | None |
ERR13290838 | MDR-TB | lineage2.2.1 | None |
ERR10112853 | XDR-TB | lineage4.1.1.3 | None |
ERR13284232 | MDR-TB | lineage2.2.1 | None |
SRR30180449 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3287826 | Pre-XDR-TB | lineage4.1.1.3 | pe |
SRR13180240 | MDR-TB | lineage2.2.1 | None |
SRR7516373 | HR-TB | lineage2.2.1 | None |
SRR18714896 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11662161 | MDR-TB | lineage2.2.1 | None |
SRR067508 | MDR-TB | lineage2.2.1.1 | None |
ERR2516463 | Pre-XDR-TB | lineage4.3.4.2 | pe |
ERR551767 | MDR-TB | lineage2.2.1 | None |
SRR6824347 | RR-TB | lineage4.4.2 | cn |
ERR5865014 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11662594 | MDR-TB | lineage2.2.1 | None |
ERR11488432 | MDR-TB | lineage4.9.1 | None |
SRR14088374 | Pre-XDR-TB | lineage4.2.2.2 | None |
ERR4800121 | RR-TB | lineage3 | None |
ERR11069092 | MDR-TB | lineage4.1.2.1 | None |
ERR7911259 | MDR-TB | lineage4.2.1 | md |
SRR28393656 | MDR-TB | lineage4.1.4 | None |
SRR6824708 | MDR-TB | lineage2.2.1 | cn |
ERR6362259 | Pre-XDR-TB | lineage4.1.1.3 | None |
ERR2099781 | Pre-XDR-TB | lineage4.1.2.1 | es |
SAMEA2534002 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534179 | MDR-TB | lineage2.2.1 | uz |
SRR28394263 | Pre-XDR-TB | lineage4.1.1 | None |
ERR13285089 | MDR-TB | lineage4.1.2.1 | None |
ERR4797831 | Pre-XDR-TB | lineage2.2.1 | in |
ERR10680076 | MDR-TB | lineage6.3.1 | None |
ERR2179654 | MDR-TB | lineage4.5 | cn |
ERR553001 | MDR-TB | lineage4.1.1.1 | None |
SRR5709960 | Pre-XDR-TB | lineage2.2.2 | th |
SRR11662695 | MDR-TB | lineage2.2.1 | None |
SRR11567805 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1723976 | RR-TB | lineage4.4.2 | cn |
SRR8651562 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR25389481 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1103591 | MDR-TB | lineage4.1 | None |
ERR6362771 | Pre-XDR-TB | lineage4.1.1.3 | None |
ERR551528 | MDR-TB | lineage2.2.1 | None |
ERR5865013 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865016 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865018 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7516370 | HR-TB | lineage2.2.1 | None |
SRR10828644 | MDR-TB | lineage2.1 | None |
ERR4817896 | HR-TB | lineage2.2.1 | None |
ERR978256 | XDR-TB | lineage2.2.1 | None |
ERR8975781 | XDR-TB | lineage4.1.1.3 | None |
ERR551527 | MDR-TB | lineage2.2.1 | None |
SRR5709921 | MDR-TB | lineage2.2.1 | th |
SRR17658004 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25389483 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11050149 | MDR-TB | lineage4.1.2.1 | None |
SRR29055400 | MDR-TB | lineage2.2.1 | None |
SRR11662288 | MDR-TB | lineage2.1 | None |
ERR551528_ERR551527 | MDR-TB | lineage2.2.1 | None |
ERR3509860 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
ERR7801135 | HR-TB | lineage4.3.3 | None |
ERR8773876 | Pre-XDR-TB | lineage4.3.3 | None |
SRR28868784 | HR-TB | lineage2.2.1 | None |
SRR11662566 | MDR-TB | lineage2.2.1 | None |
SRR28393623 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR21576621 | MDR-TB | lineage2.2.1 | None |
SRR21747032 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4797228 | Pre-XDR-TB | lineage2.2.1 | in |
SRR7517690 | XDR-TB | lineage2.2.1 | None |
ERR978257 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4831469 | MDR-TB | lineage3 | None |
DRR130057 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665768 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13258519 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16156282 | XDR-TB | lineage4.1.1.3 | None |
ERR13291535 | MDR-TB | lineage2.2.1 | None |
ERR11081349 | MDR-TB | lineage2.2.1 | None |
ERR5865012 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2179644 | RR-TB | lineage4.4.2 | cn |
ERR551767_ERR551768 | MDR-TB | lineage2.2.1 | None |
ERR2099782 | Pre-XDR-TB | lineage4.1.2.1 | es |
SRR29385416 | RR-TB | lineage4.5 | None |
ERR4796473 | MDR-TB | lineage3 | in |
SRR18715415 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1723751 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR5709923 | MDR-TB | lineage2.2.1 | th |
ERR6397174 | MDR-TB | lineage4.1.2.1 | None |
SRR29093801 | MDR-TB | La3;lineage3 | None |
SRR5153719 | Pre-XDR-TB | lineage4.2.1 | None |
SRR11662589 | MDR-TB | lineage2.2.1 | None |
ERR13258463 | Pre-XDR-TB | lineage2.2.1 | None |
DRR130171 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2099777 | MDR-TB | lineage4.1.2.1 | es |
SRR28239956 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865015 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4831097 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11567806 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29093117 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25389473 | MDR-TB | lineage2.2.1 | None |
SRR29231776 | RR-TB | lineage4 | None |
SRR11662304 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9907712 | MDR-TB | lineage4.3.2 | None |
ERR13191623 | MDR-TB | lineage2.2.2 | None |
SRR21747046 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10828192 | Pre-XDR-TB | lineage2.2.2 | None |
SRR5486880 | RR-TB | lineage4.3.3 | None |
SRR6824563 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR7911387 | Pre-XDR-TB | lineage2.2.1 | us |
ERR2706941 | RR-TB | lineage4 | cd |
SRR11662673 | MDR-TB | lineage2.2.1 | None |
SRR20969586 | MDR-TB | lineage2.2.1 | None |
SAMEA2533365 | MDR-TB | lineage4.4.1.1 | uz |
SRR21685367 | MDR-TB | lineage2.2.1 | None |
ERR11081055 | MDR-TB | lineage4.1.2.1 | None |
ERR4799528 | Pre-XDR-TB | lineage1.2.2.2 | in |
ERR13258407 | Pre-XDR-TB | lineage2.2.1 | None |
SRR18714773 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4829063 | MDR-TB | lineage4.1.2.1 | ng |
SRR5709803 | Pre-XDR-TB | lineage2.2.2 | th |
ERR4813215 | Pre-XDR-TB | lineage4.3.3 | None |
ERR2517062 | MDR-TB | lineage4.3.4.2.1 | gb |
ERR789237 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1723935 | MDR-TB | lineage4.5 | cn |
SRR7516423 | Pre-XDR-TB | lineage2.2.1 | None |
DRR130167 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13264954 | Pre-XDR-TB | lineage4.2.2.2 | None |
SRR3105750 | MDR-TB | lineage1.2.2.2 | None |
ERR2516459 | MDR-TB | lineage2.2.1 | nl |
SRR1162481 | MDR-TB | lineage4.1 | None |
ERR10112889 | Pre-XDR-TB | lineage4.1.1.3 | None |
SRR28239630 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4812984 | MDR-TB | lineage4.1.1 | pe |
ERR13243566 | MDR-TB | lineage2.2.1 | None |
SRR067530 | MDR-TB | lineage2.2.1.1 | None |
ERR13284937 | MDR-TB | lineage4.1.2.1 | None |
ERR13258515 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13273328 | MDR-TB | lineage2.2.1 | None |
SRR25206945 | MDR-TB | lineage2.2.1 | None |
ERR2516478 | Pre-XDR-TB | lineage4.3.4.2 | pe |
SRR29055894 | MDR-TB | lineage1.1.2 | None |
SRR5341281 | Pre-XDR-TB | lineage1.2.2.2 | in |
DRR130168 | Pre-XDR-TB | lineage2.2.1 | None |
ERR688035 | Pre-XDR-TB | lineage4.1.1.3 | None |
SRR067499 | MDR-TB | lineage2.2.1.1 | None |
SRR21576643 | MDR-TB | lineage2.2.1 | None |
ERR550648 | MDR-TB | lineage4.4.1.1 | None |
ERR8773609 | MDR-TB | lineage2.2.1 | None |
SRR21576639 | MDR-TB | lineage2.2.1 | None |
ERR7737934 | MDR-TB | lineage3.1.1 | None |
ERR551768 | MDR-TB | lineage2.2.1 | None |
DRR130169 | Pre-XDR-TB | lineage2.2.1 | None |
SRR26937087 | MDR-TB | lineage2.2.1 | None |
ERR13266692 | Pre-XDR-TB | lineage3 | None |
ERR6397184 | MDR-TB | La3;lineage3 | None |
SRR18003043 | Pre-XDR-TB | lineage2.2.2 | None |
ERR550649_ERR550648 | MDR-TB | lineage4.4.1.1 | None |