lineage | Count |
---|---|
lineage6.3;lineage2.2.1 | 1 |
lineage1.1.1.1 | 1 |
52 | |
lineage2.2.1 | 3 |
lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.1.2.1 | 1 |
lineage4 | 2 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR23902011 | HR-TB | lineage1.1.1.1 | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675465 | HR-TB | None | SRR3675234 | Other | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR4034222 | Sensitive | lineage4.3.2.1 | None | ERR4816999 | Other | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3732650 | MDR-TB | lineage4.3.3 | None | SRR3742665 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | SRR4033377 | HR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | SRR5341302 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2693230 | Other | None | ERR2693231 | Other | None | ERR3797044 | Other | None | ERR2693254 | Other | None | SRR6046540 | HR-TB | None | ERR323043 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3797014 | Other | None | ERR2693257 | Other | None | SRR6044790 | HR-TB | None | SRR6046644 | HR-TB | None | ERR502532 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797061 | Other | None | ERR4811105 | HR-TB | None | ERR3797069 | Other | None | ERR4810741 | HR-TB | None | ERR387051 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4811022 | HR-TB | None | ERR6358991 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | SRR1172728 | MDR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR19303884 | HR-TB | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR19304036 | HR-TB | None |
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