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SRA data
Rv3805c
- c.138A>G
Drug resistance types
5 Sensitive
3 RR-TB
12 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.2.1
7
La1.8.2
2
lineage4.9
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
lineage4.9;lineage6.3
2
La3;lineage2.1;lineage4.9;lineage6.3
2
M.canetti;lineage2.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.9
1
lineage2.1;lineage4.9;lineage6.3
1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
33
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11044901
Sensitive
lineage4.1.2.1
None
ERR11067355
Sensitive
lineage4.1.2.1
None
ERR11082021
RR-TB
lineage4.1.2.1
None
ERR11082814
Sensitive
lineage4.1.2.1
None
ERR13262195
Other
lineage4.1.2.1
None
ERR13273120
Sensitive
lineage4.1.2.1
None
ERR13285170
RR-TB
lineage4.1.2.1
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR323045
HR-TB
lineage1;lineage4.9
None
ERR4810741
HR-TB
La3;lineage2.1;lineage6.3
None
Showing 1 to 10 of 33 entries
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